Triplophysa dalaica: 130414414
Help
Entry
130414414 CDS
T09616
Symbol
cnot4a
Name
(RefSeq) CCR4-NOT transcription complex subunit 4
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130414414 (cnot4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130414414 (cnot4a)
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130414414 (cnot4a)
04121 Ubiquitin system [BR:
tdw04121
]
130414414 (cnot4a)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130414414 (cnot4a)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
130414414 (cnot4a)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130414414 (cnot4a)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130414414 (cnot4a)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130414414 (cnot4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-C3HC4_3
zf-UDP
zf-C3HC4_2
zf-RING_2
zf-CCCH_2
Nup35_RRM_2
DZR_2
RDD1
zf-C3HC4
Torus
Motif
Other DBs
NCBI-GeneID:
130414414
NCBI-ProteinID:
XP_056596270
LinkDB
All DBs
Position
24:complement(7753263..7760843)
Genome browser
AA seq
770 aa
AA seq
DB search
MSCSPELKEDPMECPLCMEPLEIDDVNFFPCTCGYQICRFCWHRIRTDENGLCPACRKPY
PEDPAVYKPLSQEEIQRIKNEKKQKQNEKKQKVTENRKHLASVRVVQRNLVFVVGLSQRL
ADAEVLKRPEYFGKFGKIHKVVINNSTSYAGSQGPSASAYVTYIRSEDALRAIQCVNNVI
VDGRTLKASLGTTKYCSYFLKSMQCPKPDCMYLHELGDEAASFTKEEMQAGKHQEYEQKL
LQDLYKANPNFLQTSTCGGEKSKSKSNSTQRPNSTNKEGWPSLQGYGKMVNGLPTEHRKS
PPLLDCLTDLDHMTPDEPDSELGTEQNTGLPPFPSALEPTSPIDKSSEPISIGNGENISQ
TSSSDSPSPPPGLTKQSLVVPISVAELAARSPFEGAAAESQSLFSDNSNFRHPNPIPSGL
PSFSSSPQGASDWPMTPEPQSLFTSDTIPVESSTDWQAAFGFGSSAKQQQQDDDLGFDPF
DVTRKALADLIEKELSVQEPSPYSSYQNALPNGQQRPPHLQHRGLYNSFSLPQHSTTHHP
WMGLPIRNNLTHLNHTSTAAAAHSHFLDLSMPAQHHSTGLGGIPISDNNGSVESLNVKEW
QDGLRALLPNININFGGLPNSTSSSSSSSTSSVNHIGVPIGSAGISHSLSWDSTASWMDP
AIITGIPANAGNNMDCLQDDNPPHWLKSLQALTEMDGPASSSALPQPPHTSLLDAAANLS
LHRAAWAPYLPPPSLNPSQFHSPPPGFQTAFRPPAQTATDILQSAGIDRH
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgcagtccagaactgaaagaagatccaatggagtgcccactttgcatggaacct
ctggagattgacgatgtcaacttcttcccctgcacctgcggctatcagatctgcagattt
tgctggcaccgtatccgcacagacgagaatggcctctgccctgcttgcagaaagccgtac
ccggaggacccggcagtatacaaaccactgtcacaagaagagattcagagaataaagaac
gagaagaagcagaagcagaacgaaaagaagcagaaagtgaccgagaaccgcaagcacctg
gccagcgtccgcgtggttcagaggaacctggtgttcgtggtggggctgtctcagaggctt
gccgatgccgaggttctaaagcgtccagaatattttggaaagttcggcaaaatccataaa
gttgtcatcaataacagcacttcatatgcaggttcacagggtcctagtgccagtgcctat
gtaacttacatccgttcagaggacgcccttcgggccattcagtgcgtaaacaatgtcatt
gtggatggtagaacactcaaggcttctttaggtacaacaaaatactgcagttattttctc
aaaagcatgcagtgtcctaaaccagactgcatgtatttacacgagctgggtgatgaagcg
gcaagttttacaaaagaagaaatgcaggctgggaaacaccaagagtatgagcaaaagtta
ctccaagacctttacaaagccaaccctaactttttacaaacatcaacgtgcggaggagag
aagtctaagagcaaatcaaactcaacccagagacccaatagcacaaataaagaaggttgg
ccctcattacaaggctatgggaaaatggtaaacggtttacccacagagcatcgcaagtcc
cctccacttttagactgcctaacagacttggatcacatgacgccagatgaaccagactct
gaactgggaacagaacagaatacaggcctcccacccttcccatcagccttagagcctacc
agtccaattgacaaatcatcagaacccataagtatagggaatggggagaatatatcacag
acatccagtagcgattccccatctcctccacctggccttaccaaacagagtctcgtcgtg
cccatcagcgtggcagagctcgcggcacgttcgcccttcgagggtgcagcagcagagtct
cagtctcttttctcagacaacagcaatttcagacatcccaaccccatccccagcggcctg
ccctccttctccagctctccacagggagcatccgactggcccatgacaccagaaccacag
agccttttcacatcagacactatacctgtggagtcctccactgactggcaagcggccttc
ggtttcggctcctctgccaagcagcagcagcaggacgacgacctcggtttcgaccccttc
gacgtcacgcggaaggccctggccgacctcatagagaaagagctgtcggtccaggagccc
tccccctactcatcctatcagaacgccctccccaatggtcaacaacgccctcctcaccta
cagcacagaggcctctataactccttcagcctgccccaacactcaaccacacaccatccc
tggatgggcctgccgatccgaaataatctcacacacttgaaccacacatccacagcggcc
gccgcacacagccacttcttagacctgagcatgccggcccagcaccacagcaccggtctt
ggggggattcctatatcagataacaacggctcggtggaaagcttaaatgtgaaggagtgg
caggacggactgcgagcactcttaccaaatatcaacatcaacttcggaggtctcccgaac
tctacctcttcctcctcatcttcctccacctccagcgtgaatcacatcggggtgcccatt
ggctcggctggaatctcgcacagcctcagctgggacagtacggccagttggatggatccc
gccatcatcacaggtatccctgcaaacgcaggcaacaatatggactgtcttcaggatgac
aatccgccacactggctcaagtccctgcaggcactcacagagatggacggaccggccagc
tccagcgccctgccacagccccctcacaccagcctgctggacgcggcggccaacctctcc
ttacacagagccgcgtgggccccgtacctcccccctccatcgctgaaccccagtcagttc
cattccccacccccaggctttcagacagccttcagacccccagcgcagaccgccacagac
atcttacagagcgccggcatcgaccgtcattaa
DBGET
integrated database retrieval system
