Triplophysa dalaica: 130414468
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Entry
130414468 CDS
T09616
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
130414468 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tdw03400
]
130414468 (neil1)
Enzymes [BR:
tdw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
130414468 (neil1)
DNA repair and recombination proteins [BR:
tdw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
130414468 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
130414468
NCBI-ProteinID:
XP_056596369
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All DBs
Position
24:9420789..9424547
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AA seq
432 aa
AA seq
DB search
MPEGPELHLATLFVNRVCEGVVFTGAVEKSEVSKCPEVPFCCDAYRIKAQSRGKETRLTL
TPIKNDGDEKSKVDKNQSQLPMDVVFRFGMSGFFRFTTVDELPKHAHLRFYTNETPRKAL
SFVDPRRFGGWQPNGSWQADRGPCIIFEYQSFRENVLSNLSDKAFDRPICEVLLNQKYFN
GVGNYLRAEILYRSQIPPFVNARTVLQGLELKDEDKKKVKAEISITESADTIKIETETPD
LLSLCHTLPLEVVKLGGKGYDPQTSDYSKIIAWMQCYGVDGMKSIRDRNGRTMWFKGDPG
PMAPKGKIRNVGGKRKVQKSDHDYTDSKKAKKKRAGDVANKKPVKRKEIKNIKEETKTSR
SQRCLKRQKNDEKAIDVEETKRPNTRRSGTAGTMGQNKKQVIESQTPNKAATYRKRTTKG
KSKRKSSQGRNT
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgccagaaggtcccgagctccatttggccacactgttcgtcaacagggtttgtgagggt
gttgtgtttactggtgctgtggagaaatcagaagtaagcaaatgtcccgaggtgccgttc
tgctgcgacgcctatcgcatcaaagcccagtccagaggaaaggagacacgtctcacgctc
acgcccataaaaaacgatggcgacgaaaaaagcaaggttgacaaaaatcaatcccagctg
cccatggatgtggttttccggtttggaatgtctgggtttttccgattcaccacggtggat
gaacttccgaaacacgcgcacctgcggttctacacaaatgagaccccacgcaaggctctg
agttttgtggatccgcgcagatttggaggctggcaaccaaatggaagttggcaagcagac
aggggaccctgtatcatatttgaataccaaagcttcagagagaatgttctttcaaatctg
tccgacaaggcctttgacaggcccatctgtgaagtgctcttaaatcagaagtatttcaac
ggggtcggaaactatcttcgagcagaaattttgtacagatcacaaattcccccgttcgtg
aatgccaggacagtacttcagggactcgagctaaaagacgaagataaaaagaaggtcaaa
gcggaaatctcaattaccgagtccgcagatacaataaagattgaaaccgagaccccggat
cttctctctctgtgtcacactcttccattagaggtggtcaaactgggtggaaaaggttat
gacccccaaacgtcggattattcgaaaattatagcctggatgcaatgttacggtgtcgat
ggaatgaaatcaataagagaccgcaacggacggacgatgtggtttaaaggtgatcctggt
cctatggcccccaaaggtaaaattagaaatgtgggaggaaaaaggaaagtacagaagagt
gatcatgattacacggattcaaagaaagccaagaagaaacgcgcaggcgatgtagcaaat
aaaaagcctgttaagcgaaaggagatcaaaaatataaaggaggaaacaaagacatccagg
tcacagcgttgcttaaaaagacagaaaaatgatgaaaaggcgattgacgtagaagaaacc
aaaagaccaaacacacgcaggagcggaacagcaggaactatgggccaaaataagaagcaa
gtgatcgaaagtcaaaccccaaataaagctgccacctacaggaaacgcaccacaaaagga
aagtcaaagcggaaaagcagccaaggtcgtaacacatga
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