Triplophysa dalaica: 130414491
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Entry
130414491 CDS
T09616
Symbol
afg3l1
Name
(RefSeq) AFG3-like protein 1
KO
K08956
AFG3 family protein [EC:3.4.24.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130414491 (afg3l1)
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tdw03110
]
130414491 (afg3l1)
Peptidases and inhibitors [BR:
tdw01002
]
Metallo peptidases
Family M41: FtsH endopeptidase family
130414491 (afg3l1)
Chaperones and folding catalysts [BR:
tdw03110
]
Other chaperones and cochaperones
AAA proteases
130414491 (afg3l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M41
AAA
AAA_lid_3
FtsH_ext
AAA_22
AAA_5
AAA_16
TIP49
RuvB_N
AAA_2
IstB_IS21
AAA_14
nSTAND3
AAA_28
AAA_17
Peptidase_M50B
LonB_AAA-LID
Motif
Other DBs
NCBI-GeneID:
130414491
NCBI-ProteinID:
XP_056596401
LinkDB
All DBs
Position
24:complement(15864675..15875533)
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AA seq
757 aa
AA seq
DB search
MTVMAGLLSAAVVSLRSGSRALMRINTRAAAHQQFLALHHLKPSASIGNIYSIPRFLYSS
EPPKDAKPSGPENRAGGGKGRKGGKKDWKSRLLQGDVPWDDKDFKYILIAAGGVTSVLLY
LYLRDPGREISWKDFVHRYLGRGLVDRLEVVNKQYVKVILIPEADTTESYAWFNIGSVDS
FERNLEAAHYELGLEPSHRAAVVYTSESDGSFLMSFIPTLLLIGFLLFTLRRGPMGGGMG
GGRGGPFSMSESTAKMMKDNIDVKFKDVAGCEEAKVEILEFVNFLKNPQQYQDLGAKIPK
GAVLSGPPGTGKTLLAKATAGEANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKNAPC
ILFIDEIDAVGRKRGGGNFGGQSEQENTLNQLLVEMDGFNTSTNVVVLAGTNRPDILDPA
LMRPGRFDRQIYIGPPDIKGRASIFKVHLRPLKLDPSLDRDAIARKMAAATPGFTGADIA
NLCNEAALIAARHLNEFIKIKHFEQAIDRVIGGLEKKTQVLQPTEKKTVAFHEAGHAVVG
WFLQHADPLLKVSIIPRGKGLGYAQYLPKEQYLYTREQLFDRMCMMLGGRVAEHVFFSKI
TTGAHDDLKKVTQSAYAQVVQFGMSEKVGQVSFDLPRQGEMVTEKPYSEATAELIDEEVR
ELVDRAYIRTLELITEKREQVEMVGRRLLEKEVLDKADMVELLGPRPFEEKSTYEDFVEG
TGSFEEDTSLPEGLKDWNQERGENQEETPASQEKQAA
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcatggcagggctgctctctgcggcagttgtctcactgcgatccggatcaaga
gctttaatgcgaattaacacacgagctgcagcacatcagcagtttttagccctgcatcac
cttaaaccatcagcatccatagggaatatctactcaatcccacgcttcttgtattccagt
gaaccacctaaagatgctaaaccaagtggaccagaaaatcgggccggagggggcaaaggg
aggaaaggaggaaagaaagactggaagagcagattactgcagggagatgtgccgtgggac
gacaaggattttaagtatattttgatcgcagcaggaggtgttacatctgtcctgctctac
ctctacctcagagatccagggagagagatctcgtggaaggattttgtccatcgctacctg
ggcagagggctggttgaccgtttagaggttgtgaataaacagtatgtcaaggtcatcctg
atacctgaggctgataccacagaaagctatgcgtggtttaacattggcagtgtggactca
ttcgagcgtaatctggaggctgctcattatgagctgggtctggagccgtcccacagagcc
gccgtggtgtacacctctgagagtgacgggtcttttctgatgagtttcattcccacgctt
ctcttgattggcttcttgcttttcactctgcggcgtgggccaatgggaggaggaatgggc
ggcggaaggggcgggccctttagcatgagcgaatctaccgccaagatgatgaaagacaac
attgatgtgaagtttaaagatgttgctggatgcgaagaagccaaggtggagatcttggag
tttgtcaatttcctcaagaaccctcaacagtatcaggacctgggtgctaagatccctaag
ggtgctgtgctgtctggtcctccgggcacaggtaaaacattgctcgccaaagccactgct
ggagaagcaaacgttccttttattacagtcaacggctctgagtttctcgagatgttcgtt
ggagtcggtccagcccgagtgagggacatgtttgctatggcgaggaagaacgctccctgc
atcctcttcatcgatgagatcgacgctgtggggaggaagaggggtggagggaacttcggt
ggccagagtgaacaggaaaacaccctgaatcagctgctggtcgagatggacggttttaat
actagcacaaatgttgtcgttctggctggtacaaacagaccggacatccttgatcctgca
ttgatgcgaccgggaaggtttgacaggcagatatacataggaccacctgatattaaaggc
agagcatccatctttaaagtacacctgcggcccctcaaacttgaccccagtctggaccgt
gatgccattgcgaggaagatggcagctgccacaccgggctttactggtgctgatattgca
aatctgtgtaatgaagctgctcttattgctgccagacatctgaatgaatttatcaaaatt
aaacacttcgagcaggccatcgacagagtcattggaggtctggagaagaagacacaagtc
ttacaacccactgagaaaaagaccgtagcctttcatgaggcggggcacgcagtggtgggc
tggtttctccaacatgctgaccctctccttaaggtttctattattcccagagggaagggt
ctgggttatgcgcagtaccttcccaaggagcagtatttatatactcgagagcagctgttt
gacaggatgtgtatgatgttgggtggacgtgtggccgagcatgtgttcttcagcaaaatc
accactggagcgcatgatgaccttaagaaggtcacacagtcagcatacgctcaggttgtg
cagtttggcatgagcgagaaggtaggacaggtgtcatttgacctgcccagacagggtgaa
atggttacagagaagccttacagtgaggcaacagcagagcttattgatgaggaggtcaga
gagctggttgacagagcctacataagaactctggagctcatcactgagaaacgagagcag
gtggaaatggtcggtagacgtctgctggaaaaagaagttctagacaaagctgacatggtg
gagttgctggggcccaggccattcgaggaaaagtccacctatgaggattttgtagagggc
acaggcagttttgaggaagacacaagccttccagaaggcttaaaggactggaaccaagag
agaggagaaaaccaggaggagacgccggcctcacaggagaaacaggctgcttga
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