Triplophysa dalaica: 130414608
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Entry
130414608 CDS
T09616
Symbol
lrrc4ca
Name
(RefSeq) leucine rich repeat containing 4C, genome duplicate a
KO
K07523
netrin-G1 ligand
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130414608 (lrrc4ca)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
ig
LRR_14
V-set
LRR_9
Ig_2
LRRNT
Ig_6
Mid2
Sp38
DUF6821
Calcyon
Syndecan
Motif
Other DBs
NCBI-GeneID:
130414608
NCBI-ProteinID:
XP_056596563
LinkDB
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Position
24:complement(4053902..4194406)
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AA seq
641 aa
AA seq
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MINKMTSSLTQQTMRGPRWNRAVSDPLFVLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLRDVPDGISTNTRYLNLQENLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVTSLRRLDL
GELKRLSYISEGAFEGLSNLRYLNLGMCNLKEIPNLIPLARLDELEMSGNQLSIIRPGSF
KGLVHLQKLWMMHAQIQTIERNAFDDLQSLVELNLAHNNLTLLPHDLFTPLHHLERVHLH
HNPWNCNCDILWLSWWLKEMVPANTSCCARCSSPTSHKGRYIGELDQNYFHCYAPVIVEP
PADLNVTEGMAAELKCRANSLTSVSWITPNGSIMTHGAYKIRISVLNDGTLNFTNVTMQD
TGTYTCMVSNSAGNTTASAILNVSTTENSGVSYFTTVTVETTESSHEEGQPTVQPRGGPT
PSSGIWETSPPSFTTTTTTARTQLSTKATEKTYTIPVTALSDGSLHTLDEVMKTTKIIIG
CFVAITLMAAVMLIIFYKMRKQHHQQNHHAPTRTIEIINVDEDCVTGGPTMPPLEHEHLN
HYNAYKTVYNHASTINSIHSSAHEPLLIRASSKDNVQETQI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaagatgacctcctccctgacgcagcagacgatgagaggtcctaggtggaac
cgggccgtgtccgacccgttatttgtgctgttgctggccctgcagcttctggtggtggct
ggcctggtacgagcgcagacctgcccttccgtctgctcttgtagcaaccagttcagcaag
gtcatctgtacgcgccgtggccttcgagatgttcccgatggtatttccaccaacacgagg
tacctgaaccttcaagaaaacctcattcaggtgatcaaggttgacagctttaagcatctg
cgacacttggagatacttcagctcagcaaaaaccatatccgcaacattgaaatcggagcc
ttcaatggcttggccaacctcaacacgctggagctctttgataatcggctgaccacaatc
cctaatggagcttttgagtacctttccaaactcaaggagctttggttgaggaataaccct
attgaaagtataccctcctacgcattcaatcgcgtaacctcactgcgaaggctggacttg
ggtgagctgaagaggctctcgtatatctccgaaggtgctttcgaaggcctcagcaacctg
cgatatctaaacctgggtatgtgcaacttgaaagagattcctaaccttattcccctagcc
cggttggatgagttggagatgtcaggaaaccagctctccataatcaggccaggatccttt
aaaggcctcgttcacctacagaaactgtggatgatgcatgctcagatccagacgattgag
agaaatgcctttgacgaccttcagtccctcgtggagctcaatttggcccacaataacctc
acccttttgccccatgacctcttcacaccgctacatcacctggagagggtacacttacac
cacaacccctggaactgcaattgtgacatcctgtggcttagttggtggctgaaagaaatg
gtgccggccaacaccagttgctgcgctcgctgttcttcgcccaccagtcacaaggggcgc
tacattggtgaactggaccagaactatttccattgttatgcacctgtgatcgtggagccc
ccagccgatctgaacgtgaccgagggcatggcagcggaattgaaatgtcgagcaaattct
ttgacctcagtcagctggatcacacccaacgggtccatcatgacacatggggcgtacaag
atccgcatttctgtgctcaacgacgggacgttaaacttcaccaatgttaccatgcaggac
acagggacttacacgtgtatggtgagcaactccgcaggcaacacgacagcctcagccata
ctcaacgtgtccacaacagaaaacagtggcgtcagttatttcactacagttacagtcgag
accacggaatcgtcacatgaggagggccaaccaacggtgcagccgagaggaggtcccacc
ccctcatctggaatttgggagacctcaccgccttccttcaccaccaccaccactacagcg
cggactcagctgtccaccaaggccaccgaaaagacctacaccatccccgtcacagccctg
agcgacggttccctccacactctggatgaggtgatgaagaccaccaagatcatcatcggc
tgctttgtggccatcacgctgatggcggctgtcatgctgatcatattttataaaatgcgc
aaacaacatcaccagcagaaccaccatgcaccgacacgaaccatcgagatcatcaacgta
gacgaggactgtgtaaccggtggacctaccatgccgccacttgagcatgagcatctgaat
cattacaatgcctacaagactgtgtacaaccacgcctccaccatcaattccatacatagc
tccgcccatgaacctttgctaattcgggccagttcaaaagacaatgtacaagagacccag
atctga
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