Triplophysa dalaica: 130415339
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Entry
130415339 CDS
T09616
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130415339 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130415339 (arid1ab)
03021 Transcription machinery [BR:
tdw03021
]
130415339 (arid1ab)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130415339 (arid1ab)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Helix-turn-helix
ARID
130415339 (arid1ab)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130415339 (arid1ab)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130415339 (arid1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
130415339
NCBI-ProteinID:
XP_056596925
LinkDB
All DBs
Position
25:complement(1980618..2037833)
Genome browser
AA seq
2240 aa
AA seq
DB search
MAAQVATLNTSPSVELKKPDREPKDESVLGDKQSENKELRGDGGSPGQKELHDGADVGNA
AGGGGAAADPDMKNGNGNPSRANNNQNDSGGHEGNSHPGMAHHHPGAFPPPPYGYNQHYN
RGPFHQHGGQQSPSMAGPAVMDPYPPNSHEHGYPNHFNNYSAFPNRTPYHQGQGYGMNSP
RNSQPPASGGQPGKQQPPPGGTNVTPMVASYNNPRYNVGTPQPTSTPTLNQLLTSPSSAR
SYQNYPPSDYSGQEGAAKGPGDMGSGSQYSGGHSGWQQRSHHPPPVSPGNTGQAINRTQP
PGPMDQVGKIRGQHYGSGNPYSQQQGPPPGSQQGPPYSGQGYGPPGPQRYPMGMQVRTPG
GMSGVQYGQQMSYGQHGPSGYSHNQAGYYGQQGPSSHGGQQQSPYPQQPPTGQGSQPPFT
QQPPGPTPGQGGPPYGQPQGQPSYSQTPQSSQSPYPQSQGPPQSQSASQGQQGPQSQPGY
SQPPSGPGQPPQQQGPSQQQQGPPHSQTSSSVSPQSSQQPSGQGQPSPYSQTPPLQSQQQ
QQQQQSPFQHFPPPPQELSQDSYSSQSSTPSSNQPMVSSKSGPEDNMQGRPSSLPDLSGS
IDDLPTGTEGALSPGVSTSGVSSSQGEQSNPAQSPFSPHTSPHMTGIRNPSPSPVGSPAS
GPASRTGPLSPGAMPGNQMPPRPSSVQSDGILHSSMGQDRVYVRTPQMPYGSPQSGSTLS
PRQSSGGQMHGGIVTYPQNNSMGNYGPQSGQYGPQGYPRPPAYGGMPNANYPGGTGIGGT
MNPMAGQGGGGPYAGMPPGRMGPGQMGARPYGPGMGPNMGGMPPQATTGMCPPPGINRKP
QDPAAAGMHLGPSNSIHRPPGYPTIGQGMMGAGSPYAQPMNSMQNMMNQAGQYPVPGNIT
NNSAGMAPSPEFGMEKLNPSQKLNNKVDGTPKTESKKKSSSSTTTNEKITRLYELGPEPE
RKMWVDRYLAFAEEKAMGMSNLPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELSTN
LNVGTSSSAASSLKKQYIQCLYAFECKIERGEDPPPDFFNSDPKKNQAKVQPPSPAGSGS
LQGPQTPQSTSSSLAEGGDLKPPTPASTPHSQIPPMPGSRSSVNLQDPFADGGDPAFSRR
NSLTPNSGYQPGMGGPDVMGRMGPYEPNKDPFSGMRKAGEQFMTPGQGPNSGMGEQYNRG
PPGPMGNMQMGQRQQYPYGPGFDRRSDSGMCPDGNMGQQPNMMPSVADAGMYSPNRPPQQ
QRHDSYGNQYPGQGAPPSGSYPNQQPGIYPQQQPNYTQKRPVEGVYGPPAKRHEGDMYPF
SGQQQGPQAPGGPQSQPDMYNQYNTFSGSDRRQPGPQNQFPFGFGRDRGPNTGGPNSQSS
MAPQMIVSSMPAVPDGPQGPMWPGRNEINYPNYHNRQGPPGAHSQNANYHGMNRPDDMMP
TDQRMNHDGAWPSHVNQRQSPYGPGATGPPMSRPLQPNYQTPQNHIPQVSSPAPMPRPME
NRTSPSKSPYMHQAMKIQRAGPPVPASHIAQPPAQPPQIRRDVAFPPGSVESSQPILKPR
RRLNMKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTFSLNQLPGFLELI
VEYFRRCLIEIFGILKEYEVGDPGQRTLIDPDAMDLEMSDEEGLEAEQMEEEEEDDEDVE
NSIKQLPQVQVKQEKEECAQVQKPSDRPNQVERNGEDTLCKDLVRSPTPMQEISASKDRP
KQTSKFDKLPIKILRKKDPFVIGRTSQLGRRQAFDSGLIHWSVGGGDTTEHIQTHFESKM
KLLKHRKQVPVNIESHKKVLQVVEPDTDDAEKVPTNEQLQPSTNQLSESKSTATASTSTS
ISATIDDVLSARQGSMNEEAVRGNQDTDKERNKFLFGLDLKKQSCNIRIVEDEPHSKDET
PLCMLSDWQDALSRRCICVSNIVRSLSFIPGNDLEMSKHPGLLLILGRLVLLHHRHPERK
QAPVTYEKEEEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGKLDLSIYPESICLPLL
DGLLHWAVCPSAEAIDPFPTLGLNGSLSPQKLVLETLSKLSIQDNNVDLILATPPFSRLE
KLYGSLVRMVGDRKVPVCREMAVVLLANLAQGDSVAARAIAVQKGSVGNLLGFLEDSLAA
TQFQQSQVSLLHLQGTHFEPTSMDMMRRAARALHAFAKVEENHSEFTLYESRLLDISVSP
LMNSLVSHVICDVLFLIGQS
NT seq
6723 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccactctcaacactagcccgtccgtcgaactcaaaaagccggac
cgggagccgaaggacgagtcggtgttaggagataagcagtcggaaaataaggagctacgc
ggcgacggtggatccccgggccagaaggagctgcacgacggggccgatgtgggaaatgct
gccgggggaggaggagcagcagccgaccctgacatgaagaacggcaacggcaacccgtcc
agggcgaacaataaccagaatgattctggcggacacgaagggaacagccaccccgggatg
gctcaccaccacccgggcgctttccctccacccccatacggttataaccagcactacaac
cggggcccttttcatcaacatggcggacaacaaagccctagcatggctgggccggcggtg
atggacccatacccgcccaattcacatgagcacggctacccgaaccactttaacaactac
agcgcctttccgaaccggactccgtaccaccagggccaaggatatggcatgaattccccg
cgaaacagccagccgccggcgtccggggggcagccgggaaagcagcagccgccgccagga
ggaactaacgttacgccgatggttgcttcctataataatccgaggtataacgtgggcacc
cctcagcccacatccacccctactttaaaccagctccttacctctcctagctccgcaagg
agctaccaaaactacccacccagtgattacagcggtcaggaaggggctgctaagggaccg
ggggatatgggcagcggtagtcagtatagtgggggccactcgggctggcaacaaagaagc
catcaccctcctcccgtgagcccgggaaacaccggacaagccatcaacagaacccagccg
ccaggccccatggaccaggtcggaaagattagagggcagcactatggttcaggaaacccc
tactctcagcagcagggtcctccccctggctcccagcaaggacctccctactcaggacag
ggttatggacctccagggccccaaaggtaccctatgggcatgcaggtgcgaactcctgga
ggcatgagcggagtgcagtatggacagcagatgagctatggacaacatggaccaagtggt
tatagtcacaatcaagcgggttactatgggcagcagggcccttcttcccatggaggccaa
cagcagtctccgtacccccaacagccccccactggacaaggctcccagcctccctttacc
cagcaaccccctggtcctactcctggtcaaggtgggcctccctacggtcagcctcagggc
caaccttcatattcccagactccacaatcaagccagtcaccctatccccaatcccagggt
cctcctcagtcacagagtgcttctcagggccagcaagggccacagtcacagcctggatac
tctcaaccaccttccggtccagggcagccacctcagcagcagggtccctctcaacagcag
cagggtccgcctcattcacagacctccagctcggtatccccacagtcatcccagcaacct
tcggggcagggtcagccctcaccctattctcagactcctccattgcagtcccagcaacag
cagcagcaacaacagtcacccttccaacattttccaccaccaccacaggagctgtctcaa
gactcctatagttcccagtcatctactccttcttccaaccagccaatggtgtccagtaag
agtggtccagaagacaacatgcagggacgaccttccagccttcctgacctgtcaggctcc
attgatgatctccctacaggcactgagggtgctttaagtccgggcgtgagcacatcaggt
gtatcaagcagtcagggtgaacaaagcaacccagcacagtcacccttctctccccacacc
tcccctcacatgacgggcatccgcaatccctcgccttcacctgtaggatcacctgcaagt
ggacccgcctcacgcacaggaccactctcccccggagccatgccaggaaaccagatgccc
cccagaccctccagtgtgcagtcagatggcatactgcattcctcaatgggtcaggataga
gtatatgtgcgaacccctcagatgccatacggctctcctcaatcaggatcaactttatcc
ccacggcaatcttctggaggtcaaatgcatggtgggattgttacctatccacaaaacaac
tccatgggcaactatggaccacagagtggccagtatggaccacaaggttacccaaggccg
ccagcttatggaggtatgcccaatgcgaactaccctggtggtactggaataggcggcaca
atgaatcctatggcagggcagggtggaggtgggccatatgcaggaatgcctcctggaagg
atgggcccggggcagatgggggcaaggccttacggccctggcatgggccccaacatgggc
ggaatgccccctcaggcgacaactgggatgtgtccgccacctgggataaacaggaagccc
caggatcctgctgcagctggcatgcacctcggcccatctaattcgatacacaggccacct
ggttatcccaccattggtcaaggcatgatgggagctgggtctccatatgcccaacccatg
aacagcatgcaaaacatgatgaaccaagcgggacaatacccagtgcctggaaacatcacc
aataactctgcgggcatggctcccagtccagagttcggcatggaaaagctcaacccgtct
cagaagttaaataacaaagtggacgggactcctaagacagaatctaaaaagaagtcaagt
tcttctaccaccaccaatgaaaagatcacccgcctatatgagctgggaccagagccggag
agaaaaatgtgggtggaccgttacttggcatttgctgaggagaaagctatgggcatgagc
aatttacctgcggtgggccgcaagccccttgacctcttccggctctacgtgtctgttaaa
gagattggtggcctcactcaggtgaacaagaacaaaaagtggagggagttatccactaat
ttgaatgtagggacatccagcagtgccgccagctctttgaagaagcagtacatccagtgt
ctctatgcctttgaatgcaagattgaacgaggagaagacccaccgcctgactttttcaat
agtgaccctaaaaagaaccaggccaaggttcagcctccgtcaccagctggatcaggatct
ttacagggtcctcagacacctcagtcgaccagcagctccttggctgagggtggagacctg
aagccccctacacctgcatctacgcctcacagccagattccccccatgcctggttctaga
agcagtgtcaatttgcaggatccatttgctgacggtggggacccagcattttccagacga
aactctctgaccccaaattcaggttatcagcctggtatgggggggccagatgtgatgggc
cgcatgggaccttatgagcccaataaggaccctttcagtggtatgagaaaagcgggtgaa
cagttcatgaccccaggccaaggcccaaatagtgggatgggtgagcagtataacagaggc
cctccaggacctatgggcaatatgcagatgggtcaaagacaacagtatccatatggtcca
ggatttgatagaagatcagattcaggtatgtgcccagatggtaacatgggtcaacaaccg
aacatgatgccttctgttgcagatgcagggatgtactcccccaaccggcccccacaacag
caaaggcatgattcatatggtaatcaataccctggccaaggggctccacctagtggatca
tacccaaaccagcagccgggaatatacccacagcagcaaccgaattacacacagaagagg
ccagttgagggtgtttatggacctcctgcaaagcgtcatgaaggggacatgtaccccttt
agtggtcaacagcaaggacctcaagccccaggtggaccccagtcccaaccggatatgtac
aaccagtataacaccttttcaggctctgacagacgccaacccggcccacagaaccagttt
ccctttggtttcgggcgagatcgagggcctaacacaggtggcccaaactctcagtcctcc
atggctccacagatgattgttagctccatgccagcagttcccgatggaccccaaggaccc
atgtggccaggacgtaatgagattaactaccctaactatcacaatcgtcagggcccccct
ggtgcccactcccagaacgctaactaccatgggatgaatcgccctgacgacatgatgcct
acggaccaacgcatgaatcatgatggagcttggcctagccatgtcaaccaacggcagtcc
ccatatgggccaggagctactggtccaccaatgtccagacctcttcagccaaactatcaa
accccccaaaaccacattccacaggtgtctagtcctgcacccatgccaagaccaatggaa
aatagaacgtcacccagtaagtccccatacatgcaccaggccatgaaaattcaaagggct
ggaccaccagttcctgcttcacacattgcccagccaccagcgcagccccctcaaatacgg
agagatgtggcattcccacctggttcagtagagtcctcgcagcctattctgaaaccacgt
cgccgacttaacatgaaagatatcggtacaccagaggcctggagagtcatgatgtccctc
aaatcaggcttgttagccgagagcacttgggccttggacaccattaatattcttctatat
gatgacaacagcatttctaccttcagtctgaaccagcttcctggcttccttgagctcatt
gttgaatactttcgaaggtgccttattgagatcttcggcatcttgaaagagtatgaggtt
ggcgaccctggtcaacgtaccctgattgacccagatgccatggacctcgagatgtctgat
gaggaggggctggaggcagaacagatggaggaggaggaggaggatgatgaagatgttgaa
aacagtataaaacagttgccacaggttcaggtcaagcaggagaaagaggagtgtgcacag
gtccaaaaacccagcgacaggcctaatcaagtagagaggaatggtgaggatacattatgt
aaagatcttgttagatcacctaccccaatgcaggaaataagcgcctccaaggataggcca
aaacaaactagcaaatttgacaagcttcctattaagattttgaggaagaaagatccattt
gtcatcggccgcactagtcaactgggtcggcgacaagcttttgacagcggtctgatccat
tggagtgtgggtggtggcgataccacagagcacatacaaactcatttcgagagcaagatg
aaactgctgaagcatcggaaacaggtgcctgtgaatattgagtcacataagaaggtactt
caagtagtggaaccagatacagatgatgctgagaaggttccaacaaatgagcagctgcag
ccatccactaatcaattatcagagagcaaaagcactgcaacggcgagtacatcaacgagc
atatcggccaccattgatgacgtactatcagctcggcaaggctccatgaacgaggaagca
gttagaggcaatcaggatactgacaaggagagaaataagtttctttttggcctcgacctt
aaaaaacaaagttgtaatataaggattgtggaggacgagccacatagcaaggatgagact
ccactctgtatgctctcagattggcaggatgccctttcccgtcgctgcatctgcgtttct
aacatcgtccgcagcctttcctttattcccggcaatgatctggaaatgtcaaagcatcct
ggactattgctaatactgggcagactggtgctcttgcaccatcggcatcctgaacgcaag
caggctccagtcacctatgaaaaagaggaggaggaggatgaaggtgtcagctgtgagcga
gacgagtggtggtgggattgccttgaggttctgcgggaaaactgcttggtcacgttagca
aacatctcaggcaagctggacctttccatttaccctgagagtatttgcttgcccctgttg
gatggcctgctccactgggctgtttgcccttcagcggaagccattgaccccttccctaca
ctagggctcaacggatcgctgtctccccagaaactagtccttgaaaccctcagtaaactt
agcatccaggataacaacgttgacctcattctggctacgccgcctttcagccgtttggag
aagctctatggctctctcgtgcgcatggtcggtgatcgcaaagtgcccgtttgccgggag
atggcagtggtgctgctagctaacctcgcacaaggtgacagtgtcgcagcccgggctatc
gctgtgcagaagggtagtgtcggaaaccttcttggcttcttggaggacagtcttgcagcc
actcagtttcagcagagtcaggtctcgttgctgcacttgcaaggtacgcactttgaaccc
actagcatggacatgatgcggcgagcagcgcgtgcgctgcatgcctttgccaaagtggag
gagaaccactcagagttcacgctgtatgagtcacggctactggacatatctgtatcccca
ctcatgaactctttggtgtcccatgtaatctgtgacgtactgtttttgattggccagtca
tga
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integrated database retrieval system
