Triplophysa dalaica: 130415343
Help
Entry
130415343 CDS
T09616
Symbol
rxrba
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
tdw
Triplophysa dalaica
Pathway
tdw03320
PPAR signaling pathway
tdw04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
130415343 (rxrba)
03320 PPAR signaling pathway
130415343 (rxrba)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130415343 (rxrba)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tdw03310
]
130415343 (rxrba)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
130415343 (rxrba)
Nuclear receptors [BR:
tdw03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
130415343 (rxrba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
C1_2
Motif
Other DBs
NCBI-GeneID:
130415343
NCBI-ProteinID:
XP_056596938
LinkDB
All DBs
Position
25:12345510..12358647
Genome browser
AA seq
480 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQHSPPLAPSAAAMTSLPPITSAVNSPISSMGSPFSVISS
SLGSPCLPGTPSVGYGPISSPQMSMFPRNMEINSTVSMSGLHAVSSSDDVKPPYGLKPHS
GHSPGPMVSQKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLSYTCRDNKDCLVDK
RQRNRCQYCRYQKCLAMGMKREVVQDERQRSVQEERQRNKEREGEVESTSAANEEMPVEK
ILEAEMAVEQKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELSLDD
QVILLRAGWNELLIASFSHRSITVKDGILLATGLHVHRNSAHSAGVGAIFDRESAHNAEV
GAIFDRVLTELVSKMRDMQMDKTELGCLRAIILFNPDAKGLSSPSEVELLREKVYASLEA
YCKQRYPDQQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacagcagagattcccgaagtccagacagctcgtccgtgtcttcaccaccatca
ggccagcattcaccaccactggctccatcagccgccgccatgacttctctgccacctatc
acatctgcggtgaacagtcccatcagcagcatgggttctcccttctcagtcatcagctcc
tctctgggttctccctgcctacctggaacaccttcagtgggctatggccccatcagcagc
ccacagatgagcatgtttcccagaaatatggagatcaattcaaccgtgtccatgtcaggc
ctgcacgctgtcagcagctctgatgatgtgaagccgccctatggtttgaaaccacattcc
ggccacagccccggacccatggtttcacagaaacgcttgtgtgccatttgtggtgaccgc
tcttctggtaagcactatggagtttacagctgcgaaggctgcaagggctttttcaagcgc
accgtgaggaaggacctaagctacacatgcagggacaacaaagactgtctggttgacaaa
cgtcagaggaaccgctgccagtactgccgctaccagaagtgcctggcaatggggatgaag
cgagaggtggtccaagatgaacgacagcgatccgttcaggaagagcgtcaaaggaacaag
gagcgagaaggcgaggtggagtccaccagcgccgccaacgaagaaatgcctgtggagaag
attttggaggcagaaatggcagtggagcagaagacagagctgcatgcggacggcagctct
gggggcagttctccaaatgacccggtcactaatatctgccaggctgctgataaacagcta
tttactctggttgaatgggcgaaacggatccctcacttcagtgaactttctctggatgac
caggtcatcctcctgcgagctggctggaatgagctcctgatcgcttcattctctcatcgc
tccatcacggtgaaggatggcattctgttggccaccggcctccacgtgcacaggaacagt
gctcacagcgctggagtgggggccatctttgacagggagagtgcgcacaatgcagaggtt
ggggccatattcgacagggtgctaacggagctggtgagcaagatgagggacatgcagatg
gacaaaacagagttgggatgtttgagagccatcatcctcttcaacccagatgcaaagggt
ttgtcaagcccaagtgaggtggagttgctgagagagaaagtctatgcatcgctggaggct
tactgtaaacagagatatcctgaccagcagggcagatttgctaagctcctcctccggctg
ccagcgctgcgttccattggcttgaagtgtctggagcacctgttctttttcaaactgatc
ggcgacaccccaatcgacaccttcttaatggagatgcttgaagcccctcaccaactgacc
taa
DBGET
integrated database retrieval system
