KEGG   Triplophysa dalaica: 130415361
Entry
130415361         CDS       T09616                                 
Symbol
ubap2l
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
tdw  Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tdw04121]
    130415361 (ubap2l)
   03400 DNA repair and recombination proteins [BR:tdw03400]
    130415361 (ubap2l)
Ubiquitin system [BR:tdw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    130415361 (ubap2l)
DNA repair and recombination proteins [BR:tdw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     130415361 (ubap2l)
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 UBA_8 GIP1_N CUE
Other DBs
NCBI-GeneID: 130415361
NCBI-ProteinID: XP_056596984
LinkDB
Position
25:complement(12140850..12157467)
AA seq 1201 aa
MMTSVGGSRTRGNWEQTPGQTQSQSQHKQRPQATAEQIRLAQMISDHNDADFEEKVKQLV
DITGKDQDESMIALHDCNGDVNRAINVLLEGNPDTDSWEMVGKKKGVSGQKESAQTEGGD
EGKENREKGGERDVARRRGGNPRRGRGASRGREYRGQENGLDGTKAGGIAGRGTERGRRG
RGRGRGGAGRRGGRFSAQGMGQIDKGPRYDLSGDDSTFNPADYTEPAQTEESYTSGSTWS
NTGNLEPEDGNRLEFTGGEGTSYPRQFDSTPGAWRTATEEWGTEDWNEDLSETKIFTASS
VASMPIPQENVTITAGQRIDLAVLLGKTPPSSSEAEPASLEGPKPQTLPQSLVFSNSKQT
TSLSQSSSSVPYGQHSMVSMLSKGFGDVGDPKVTTGGSTTGSQFLEQFKTAQALAQLAAQ
HSQSGPSNASPTTWDTSPATLGQYDMKPQAEPVHSPFTKRQPYQPSSTGSSIMDAFLQDK
TMPPHTTSSSLPHSVPTTVNKPSGMASAQQNSSGPADPQASSPLPLQQHKLKQQKKRASI
TTKIPALAVEMPGSADISGLNLQFGALQFGSEPVLPEYDASAAVATTTPGNQGQNSLYTS
ASNESASALSNPSQMELYEQRASQTRRYPPSVSSSPQKDMQTKNGFSSMQTSQSLEAAAG
SAVPVKPTSDSVVPPSVSNMSSLADPSSGPSSLLTTSNQISALGHEDSSPNSLAPQHNNS
LPTQQNSLTPSSVRTSNTSLLHASVDGDSSLHSSSFSVSAVAPSGPHASSSTSVASIPHS
AHVAPSSSVTSASAQSGLGQVNSLSMGLNSAAGVASMVPPTVGVSSTSAALAAAAPSLTA
LSRSTAASGKAPPNLPPGVPPLLPNPYIVAPGLLHHYPVSFLPQMYGYDDLQMLQTRIPL
DYYSIPFATPTTPLTGREGSLTSNPYSAGDLAKFGRSDASSPAPATTLAQPQQTQTQTHH
TTQQPFLNPGLPPGYSYTSLPYYTGVPGLPNTFQYGPAMFPVAPTSSKQHGVNVGVNASA
TAFQQASGYGSHGYSTGYEDLGQATAGSGDFCKSGYGTAVAAAAVAAVSAQNKPASSVTG
PGVGVSVTSSNTGVPDISGSVYTKTQSFEKQGFHTGTPSASFSLPSALGSGGPINPPAAA
AYAPAPYMHILTPHQQPHSQMLHHHLQQDGQAGSGQRSQNSIQQKSQINKSAYNSYSWGG
N
NT seq 3606 nt   +upstreamnt  +downstreamnt
atgatgacttcagttggcggtagccggacccggggcaactgggagcagacgccgggtcag
acacagagccagtcacagcacaagcagaggccccaggccactgctgagcagatccgactc
gcgcagatgatctcggaccacaatgatgcagactttgaggaaaaggtcaaacagctggtt
gatatcacaggaaaggatcaggatgagtctatgatagcgctgcacgactgcaacggagac
gtcaacagagccatcaacgtcctattggagggcaatcctgacactgactcatgggaaatg
gtcggaaagaagaaaggagtgtcgggacagaaggaaagcgcacagacagaaggaggagac
gaagggaaggagaatcgagagaagggtggagaaagagatgtagcacggcgcagaggaggg
aatccgcggagaggccgtggagccagccgtggacgagagtatcgtgggcaggaaaacgga
ctggatggaaccaaggctggtggcatagcgggcagagggacggaaagaggccgtcgggga
agaggcagaggaagaggtggagctggtaggcgaggcggaaggttttcagctcagggaatg
ggccagattgataaaggccccagatatgatttgtcaggagatgacagtacgtttaatcca
gcggactacactgagccagcccaaacagaagagagctacacaagtggcagcacttggagt
aacactggcaacctggaaccagaagatggaaaccggcttgagtttacaggaggagaggga
acaagctatcctcgacagtttgattccacccctggtgcgtggagaactgccacagaagag
tggggtacagaggactggaatgaagacttatcagagaccaagattttcactgcctccagt
gtggcatctatgcccattccacaagagaatgtcaccataacagctggacagaggattgat
ttggctgtgttgcttgggaagacgcctccatcttcctccgaggcggaacctgcttcactt
gaaggtccaaaacctcaaactctgcctcagtctttggtgttcagcaactccaagcagacg
acctcactgtcccaatcctccagcagcgtgccctacggccagcacagcatggtgagcatg
ctcagtaaagggtttggtgatgttggagaccccaaagtaaccactggaggatccacaact
ggttctcaattcctggagcagttcaagacggcacaggctttggcccagctggcggcccag
cactcgcaaagtggaccatccaacgccagtccaactacttgggatacaagccctgctaca
ctgggccaatatgatatgaagcctcaagcagagcctgtacacagtccgttcaccaaacgg
cagccctaccagccctcttccactggctcttccattatggatgcctttttgcaagataaa
accatgccccctcacaccacctcatcctcactgccccactccgtccctaccactgtcaac
aaaccgtctggaatggcttcagctcagcagaactcttccggcccagcggaccctcaggcc
tccagcccccttcccctgcaacagcacaaactcaagcaacagaagaagagggcttccatc
acaacaaagattccagcccttgcggtggagatgccaggctctgcagatatatctgggcta
aacctgcagtttggagcgttacagttcggctctgaaccggtgcttcctgagtatgatgcc
tcggcagctgttgccacgacgacaccaggcaaccaaggccaaaacagcctttacacaagt
gctagcaatgagtctgcttcagcactatctaaccccagtcagatggagctgtacgagcag
agagccagccagacgaggcgctaccctccttctgtgtcatcctcaccacagaaagacatg
caaaccaagaatgggttcagttcaatgcaaacgtcacagtctctggaagctgcagcaggc
tctgcagtgcctgtgaaaccgacttctgattctgtcgtcccgccttcagtttctaacatg
tcctcattggccgacccctcatcaggtccttcctcgctgctgaccacatctaatcagatc
agtgctctgggccatgaagactcctcccccaactcattggctccacaacacaataactcc
ctcccaacacagcagaacagtttgacgccttcttcagttcgcacttcaaacacaagccta
ctgcacgcgagtgtagacggagattccagcttgcactcttcgtctttctccgtctctgcc
gtggctccttcgggtccacacgcttcttcctccacttcggtggcctccatcccccacagc
gcccatgtcgcaccatcttcatctgtcacttcggcgtcagcacagtctggtttgggccag
gtcaatagtttgtcaatgggactcaacagcgctgctggcgttgcctccatggttccccca
acagttggcgtgtcctcaacctcggcagccttggctgctgcagcaccttctttgactgcc
ttgtcccgcagcacggctgcatcagggaaagcacctccaaacttgcctcctggcgtgccg
cctcttcttcccaacccttacatcgtggctcctggtctgcttcaccactatccagtgagt
tttctgcctcaaatgtatggctacgatgacttgcaaatgctacagaccaggataccactg
gactattacagcattccatttgccactccaaccacaccgctgactggcagagaaggcagt
ttgacaagcaacccttattctgctggcgacctggcgaagtttggtcgcagtgatgcttcg
tcccctgcccctgcaacaacactagcccagccgcagcagacacagacccaaacgcaccat
accacccagcagccctttctcaacccgggccttccacctggttacagctacaccagcctt
ccctattacactggggtaccaggtctgcccaacaccttccagtacggccctgccatgttt
ccggtggctcctacctcgtccaaacaacatggtgtgaatgttggcgtcaacgcatcagct
acagccttccagcaggcaagcggctacggctctcacggatacagcactggctatgaggat
ttgggccaggctacggccgggagcggggatttctgtaagagtggctatggcacagccgtt
gctgcggccgctgttgccgctgtttctgcgcaaaacaagcccgccagctccgtcaccggg
cccggagtgggcgtttctgtgacatccagcaacacgggagttcctgatatttcagggtct
gtttacacaaagacgcagtctttcgagaagcagggtttccacacagggacccccagcgct
tccttcagtttgccctcggcactcgggagcggaggccccatcaaccctccggccgcagca
gcttatgcaccggccccgtacatgcacatcctgaccccccatcagcagccccactcccaa
atgctccaccaccacctgcaacaggatggacaggctggctctggacagcgcagccaaaac
tccattcaacagaagtcacagataaacaagtctgcttacaacagctacagctggggaggc
aattaa

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