Triplophysa dalaica: 130415446
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Entry
130415446 CDS
T09616
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
tdw
Triplophysa dalaica
Pathway
tdw04145
Phagosome
tdw04814
Motor proteins
tdw05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130415446
09142 Cell motility
04814 Motor proteins
130415446
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
130415446
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130415446
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130415446
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
130415446
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
130415446
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WDR55
Dynein_IC2
WD40_Prp19
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_SPT8
CCD97-like_C
Motif
Other DBs
NCBI-GeneID:
130415446
NCBI-ProteinID:
XP_056597146
LinkDB
All DBs
Position
25:6341469..6396750
Genome browser
AA seq
628 aa
AA seq
DB search
MADKSDLKAELERKKQRLAQIREEKKRKEEDKKKKESETQQKAEAAPEDSDLDRKRRETE
ALLQSIGISPEPSLVPTSMSPSKSMSTPSETGSQDSVDAAAAGRTLQWDTDPSVLQLQAD
SELGTRTHRLGPSKIIQVDFLPKEVVSYCKETQTPLAAHQSEEDEEEDEEVTEPKVGTET
EQQEEEERKDTKDGHPRELTEEERQQALHSEEFLIFFDSSIRVMERALAEDSNIFFDYSG
RDLDDKEGDLQGGSSLSLCRLFYDERWSKRRVITCLDWSPQYPELLVASYNNNEDAPHEP
DGVALVWNMKFKKATPEYIYHCQSPVVSVGFARFHPNLLVGGTYSGQIVLWDNRSHRRTP
VQRTPLSAAAHTHPVYCVNVVGTQNANNLITVSTDGRMCSWSLDMLSQPQESMELVYNKS
KPVAVTGMAFPTGDVNNYIVGSEEGTVYTASRHGSKAGICEMFEGHQGPVTGISCHSAVG
PVDFSHLFVTSSFDWTVKLWSTKQNKPLYSFEDNSDYVYDVMWSPVHPSLFAAVDGMGRL
DLWNLNKDTEVPTASVTIEGAPALNRVRWASGGKEVAVGDSEGRVWIYDVGEMAVPHSED
WSHFARTLVEIRANHGDGEEEGTGELST
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccgataaaagtgacttaaaggccgaacttgagcgcaaaaagcagcgcctcgctcag
atcagagaagaaaaaaagagaaaggaggaagataaaaagaaaaaagagtcagagacacaa
cagaaagcggaagctgcccctgaagattcagatttggaccgtaaacgcagagagaccgaa
gccctccttcagagtattggaatctcacccgaaccttcattagtcccgacatctatgtcc
ccatcaaagtctatgagcacgcccagtgaaacaggcagtcaagactctgtggatgcggct
gcagctggaaggaccctgcagtgggacactgacccttccgttctccagctgcaggctgac
tctgaactcgggactcgaacgcacaggttgggaccatctaaaataatacaggtggacttc
cttcccaaagaagtggtgtcttactgcaaagagactcagactcctcttgcagcccatcaa
tctgaagaagatgaagaagaggatgaggaggtcacagaaccaaaagttggaacggaaact
gaacaacaggaagaggaagaaagaaaggacaccaaagacggtcaccctcgggaactgacg
gaggaagagaggcagcaggctctgcactcagaggagttcctcatctttttcgacagcagc
attcgcgtgatggagagagctttggctgaggactccaacatctttttcgactacagcgga
cgtgacctggatgacaaagaaggcgatctgcagggtgggtccagtctctctctttgtcgt
ctgttctatgatgagcgctggtcaaagcggcgggtcatcacctgtctggactggtcccct
cagtaccctgagctcttggtggcttcctacaacaacaatgaagatgcacctcatgagcca
gatggtgtggctttggtgtggaatatgaaattcaagaaggcaacaccagagtacatctac
cactgccagtctccagtggtgtcggtgggttttgcacggttccatccgaacctgttggtt
ggtggcacgtactcagggcagattgttctgtgggacaaccgaagccacagaagaacaccc
gttcagcggaccccgctgtctgctgcggcgcatacacaccccgtgtactgtgtaaatgtg
gtcggcacccagaacgccaacaatctgatcactgtgtccacagacggcaggatgtgctcg
tggagtttggatatgctgtcacagcctcaggagagcatggagctggtatataataagtca
aagccggtggctgtgactgggatggcattccccactggagacgtcaataattatatagtt
ggcagtgaggagggaaccgtgtatacagcatcaagacatggcagtaaagccggtatctgt
gagatgtttgagggccatcaggggccagtgacaggcatcagttgtcacagcgccgtgggc
cccgtcgatttctctcacctgtttgtcacctcgtcttttgactggactgtgaaattgtgg
agcacaaagcaaaacaagccactctactcttttgaggacaattccgactacgtctacgac
gtgatgtggtcgcccgtgcacccctcgctcttcgccgccgtggacggtatgggtcgtctg
gatctgtggaacttgaacaaggacactgaggtgcccactgctagtgtgactatagagggc
gctcctgcgctcaatcgcgtcagatgggcgtctgggggaaaggaagtcgctgtgggagat
tcagaggggcgtgtctggatttacgacgttggagagatggccgtgccccatagtgaggac
tggtcccatttcgctcgtacgctggtggaaatccgtgccaaccatggagatggtgaggag
gaggggaccggcgagctgtcgacgtaa
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