Triplophysa dalaica: 130415462
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Entry
130415462 CDS
T09616
Symbol
arhgef1a
Name
(RefSeq) rho guanine nucleotide exchange factor 1a isoform X1
KO
K12791
Rho guanine nucleotide exchange factor 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
130415462 (arhgef1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130415462 (arhgef1a)
Membrane trafficking [BR:
tdw04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
130415462 (arhgef1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
C1_1
PH
C1_2
SOS1_NGEF_PH
Prok-RING_1
PHDvar_NSD
PHD
Anticodon_2
Motif
Other DBs
NCBI-GeneID:
130415462
NCBI-ProteinID:
XP_056597173
LinkDB
All DBs
Position
25:10793799..10812999
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AA seq
929 aa
AA seq
DB search
MSRVADLSKLREERTREINQRNKEKERMREREREAREREARYSNGHLFNSLTVSGTTLCS
ACNKSITAKEALSCPTCNVTIHNRCRDTLPNCVKMKQKQQKLALMRNNSAYQNVTLRNKS
NLKERPSSAIYPSDSLRQSLLGSRRGRSSLLLSKSVSTNNIAGTLNDDSPLGLRRILSQS
TDSLNFRSRTMSMESLNDEGEGYFTSLLEEMECEGWEFEADSWSMAVDSAYLQTHRKDVI
KRQDVIYELIQTEIHHVRTLRIMDGVFRRGMLDEVQLEPGVVHALFPCLERLLALHTHFL
TQLLARRAHSLQPDSTNNFTINQISDVLMKQFSGQSAEEILKVYAEFCSRHTKAVKLYKE
ILARDKRLQLFIRRVGRGPLLRRHGFQECILLVTQRITKYPVLFQRIYENTKDNPEEAAG
LSQTLFHIRELLSSVDHQVMELDRTHRLQEIRSKVDPRAEAKLRSGALFRPAELLRRQLI
HEGTLLWKTPGSRLKDVQVLLMTDILVFLQEKDQRLFFASLDKSAVVSLQNLLVRDIANQ
ERGLFLISSESSPPEMYELYAASKDDRNTWMRFIQQTISICPSREEFPLIETEDKALLRR
LKADIQQKDREVLELLQERVTLFSDMAEVMGGYEVTLQHCSRNLFRAESSQAPRGEQLLT
QAITEVDRLTDLLLGSGFEVPLPCSSNGHHSGALVINGQEVLVNGSQENQSAQDGNGNQM
ADKTPSEEVSQRMVNLSAQLHALQGVVIRQDSILELCLRESPVSPATTGGRTVRSLSRDG
GDVGELTLLQRQHSLLQEELVRLRGAEGKLRDSERARGQLEKQLKDLKNNSATPVEGAGT
RGSQAPSAHRESDTDPNTYTPLASQESMDQSDGLQECSDVEVDVISDDDDDDEVDSRVSP
RSDSPRDLQDIPEESETPADPRGPCVSHC
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgtagcggatctatcgaaacttcgcgaggagaggacgagggagatcaatcaa
aggaataaggagaaggaacgcatgagggagagagaaagagaagcgagggagagagaggca
cgctacagtaacggccacctcttcaactctctgactgtatcgggaacaacgctctgctcg
gcctgcaacaagagcatcacggctaaagaggccctcagctgtcccacctgtaatgtcacc
atccacaatcgctgcagggacacgttaccaaactgtgtcaaaatgaaacaaaagcaacag
aaactggcgctgatgaggaacaattcggcctatcagaacgtgacactgaggaacaaatca
aatttaaaagaaagacccagttcggccatctacccttcagacagtcttcgccaatcactg
ctgggctctcgtcgagggcgatcttctctcttactttccaaaagcgtctccactaataac
attgccgggactctgaatgatgactctcctctgggactgcgcaggattttgtctcaatcc
acagactccctcaacttcaggagcagaaccatgtcaatggaatcactcaacgatgaggga
gaaggatacttcacctctctgttggaagagatggagtgcgaggggtgggaatttgaggca
gattcctggagcatggctgtagactccgcctacctgcagacgcaccgtaaagacgttatc
aagagacaggacgtcatttacgagctgatccagacggagatccaccacgtccggacgctt
cggatcatggatggggtgttcagacggggcatgctggatgaggttcagttggagccaggg
gtcgtgcatgcgctcttcccctgtctggagagactgctggcgctgcacacgcactttcta
acacagctcctcgctcgacgcgcccacagcctgcaacctgacagtacaaacaatttcacc
attaatcagatcagtgatgtgctcatgaagcagttctcaggtcaatctgccgaagaaatc
ctgaaggtctacgccgaattctgcagtcgtcacacgaaggccgtcaaactctacaaagag
attctggctagggacaagagactccagctcttcatacggagggtgggccgggggcctctg
ctccggcgtcacggattccaagagtgcatcctgctggttacccaacgcatcacgaaatac
cccgtcctgttccagcgtatctatgaaaacaccaaagacaatcccgaggaagctgcaggc
ctctctcagacgctttttcacatacgtgagctgctcagctctgtggatcatcaggtgatg
gagctggacagaacacatcggttacaggagatccgttccaaggtcgaccctcgtgccgaa
gccaaactccgctccggggctttgttcagaccggccgaactgctccgcaggcagctgatc
cacgagggcacgctgctctggaaaacccccggctctcgactcaaagatgttcaggttctg
ctgatgactgacattctagttttcttgcaagagaaagatcaaaggttgttctttgccagt
ttagataagtcagctgtagtctccttacaaaatctattggtccgagacatagccaatcag
gagcgaggtttgttcctgatcagcagcgagtccagcccacctgagatgtacgagctgtac
gccgcatctaaagatgatcgaaacacctggatgcggtttatacagcaaaccatcagcatc
tgtccgtcaagagaagagttcccgttaatagaaacagaagacaaggcccttctgcgaaga
ctgaaagctgatatccagcagaaggacagggaggttttagagcttcttcaggagcgggtg
accctgttttcagacatggcagaggtcatgggaggttacgaggtcacattgcagcactgt
tccaggaacctctttagagcagagtcttcgcaagcccctcgcggagaacagctgctcact
caggccataaccgaagtggacaggttgacagacctgctgttaggatccggttttgaggtt
cctctgccctgcagttccaacggtcaccacagcggagcgcttgttatcaatggacaagag
gtgttggtcaatggctctcaggagaaccagtctgctcaggatgggaacgggaatcaaatg
gccgacaaaacacccagtgaggaagtatcacagaggatggttaatctcagtgcacagcta
cacgctctgcagggtgtggtgatacgacaggactccatcttagagctgtgcctacgggag
agccctgtgtctccagccaccacaggagggcgaacggttcgctccctgtcccgggatgga
ggtgacgtgggtgagctcaccctgttgcaacggcagcacagtcttctgcaggaggaactt
gtacgcctcaggggagccgaaggcaaactcagggacagcgagagagcaagaggtcaactc
gagaaacaactcaaggatcttaagaacaatagcgccactccggtggaaggtgctggaact
agaggctcacaggctccatcagctcatagagagagtgataccgaccccaacacttacacg
ccattggcaagtcaggaatcaatggaccaatcggacggcttgcaagaatgcagtgatgtg
gaagtggatgtgatatctgatgatgatgacgacgacgaagtggattcgagagtgtcacct
cgttcagatagtcctagagatttacaagacattcctgaggaaagcgagaccccagcagat
ccccggggaccctgcgtctcacactgctaa
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