Triplophysa dalaica: 130415518
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Entry
130415518 CDS
T09616
Symbol
prdm1b
Name
(RefSeq) PR domain zinc finger protein 1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130415518 (prdm1b)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
130415518 (prdm1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
C2CH-3rd_BIRD-IDD
zf-C2H2_15
zf-C2H2_jaz
STL11_N
zf-C2H2_11
Zf-C2H2_ZNF451_C
zf-met
zf-BED
B129_C2H2-zf
zf-C2HE
zf-MYST
Motif
Other DBs
NCBI-GeneID:
130415518
NCBI-ProteinID:
XP_056597263
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Position
25:8875651..8882228
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AA seq
598 aa
AA seq
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MAEIYSGGQLHHFIDGYDVQGSNWMRYVNPARSMAEQNLVACQNGQEIFFYTIRPVEPKE
ELLVWYSPEFSQRLCGRTEQPDSLKPKHMPDIGYEYHKQPLPQYYPKQPPSPYKLQSEGE
DDEVDEKIDVEVIERDTPPDTPDEQVIDCSAKILKAVPPGPVHSPHLSQKELNMRAHPYQ
TLSPPHELPLHLHGLYRHREGLISHPSLPSPRPLHAPYHLLSPYNPHYPRLLLPPYSPPF
PSMLPSKRYNSFLGTDGLPYPSIPQPGLLPVNLPYPNPLHGGLKERIPNTPPQGAPATPE
LSPQPKHSPQQTSLKPLSKCEEAINLSVSSPRSTSPAYSPSPPPPGYKSLPYPLKKQNGK
IKYECNICMKTFGQLSNLKVHLRVHSGERPFQCNLCKKSFTQLAHLQKHHLVHTGEKPHE
CQVCHKRFSSTSNLKTHLRLHSGEKPYQCKLCGVKFTQYIHLKLHRRLHSSRDRPHCCQA
CSRGFIHLFSLHLHQRSGCCPASRPEIPELRRGGELVEHFDASHEAEALPETAGESDVDA
ALEKWLARSLESGEGKEDHGVLEGFPAVPRGVTAVGHHQERASVVHFNHRSSVKTEDE
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atggcagagatttacagtggtggccagctacaccacttcattgatggctatgatgtgcag
ggtagtaactggatgcggtacgtcaacccagcacgctcaatggccgaacagaacctggtg
gcctgtcagaacggccaggaaattttcttttacaccatccggccggtggagccgaaagaa
gaactgctggtttggtacagtcctgagttctcccagagactgtgcggccggacagagcaa
ccagacagcttgaagccaaagcacatgccggatatcgggtacgagtatcacaagcagccg
ctacctcagtactacccgaaacaaccccccagcccgtacaaacttcagagcgagggagag
gatgatgaggtcgacgaaaagattgacgttgaggttatcgaaagggacacgccacccgac
acaccagacgagcaagtcatagattgcagcgcgaagatcctcaaagccgttccaccaggg
cctgtgcattctccacatctaagtcaaaaggagctgaacatgcgcgctcatccgtaccaa
acactctccccaccacatgagctcccccttcacctacatggtctctatcgtcatcgggaa
ggtttgatctcacacccttccttgccctcaccgagacctttgcatgctccctatcacctt
ttatcaccgtacaaccctcattatccccgtttgcttcttcctccatattctccacccttc
ccctccatgttgccctcgaaaaggtacaacagctttttgggtactgatggcttaccctat
ccctccataccccaacctggcctgctacctgttaatttgccctatcccaacccacttcat
ggaggtctgaaggagagaatcccaaacacaccaccgcaaggagctccagcaactcctgaa
ctctcccctcagccgaagcactccccccagcagacgtcgctgaagcctctttcaaaatgc
gaggaggccatcaacctcagcgtgtcatcgcccaggagcacatcacctgcatactccccc
tctccaccgccccctgggtacaaatctctcccttacccactcaagaaacaaaatggcaaa
atcaaatatgaatgcaacatctgtatgaaaacattcggacagctgtccaacctcaaagtg
cacttgagggtccacagtggcgaaaggccattccagtgtaacctctgtaaaaagagcttt
acccagctagcccacctccagaaacatcacctggtccacacaggagagaaaccacacgag
tgccaggtgtgtcacaaacgcttcagcagcactagtaacctgaagacccacctgcgtctg
cactcgggcgaaaagccctatcagtgcaagctatgtggggtgaaattcacccaatacatc
cacctcaaactccaccgacggctgcacagctctcgcgaccgaccccactgctgccaggcc
tgctccagaggcttcatccatctcttctccctgcatcttcatcagcgctcgggctgctgt
ccggcctcccgtcccgaaatcccagagctgagacgtgggggggagctggtggagcatttc
gatgccagtcacgaggctgaggccctgcccgagactgctggagaaagtgatgttgatgcc
gctttggaaaaatggctggccagaagtttggaaagtggtgaggggaaggaggaccatggg
gtcctcgaaggattcccagcggtgccacgaggggtgaccgctgtggggcatcaccaggag
agagccagtgtagtacacttcaaccatcggtcttctgttaagactgaggatgagtag
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