Triplophysa dalaica: 130415545
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Entry
130415545 CDS
T09616
Symbol
rnf2
Name
(RefSeq) E3 ubiquitin-protein ligase RING2
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
130415545 (rnf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130415545 (rnf2)
03036 Chromosome and associated proteins [BR:
tdw03036
]
130415545 (rnf2)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130415545 (rnf2)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130415545 (rnf2)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
130415545 (rnf2)
Noncanonical PRC1 (PRC1.1)
130415545 (rnf2)
Noncanonical PRC1 (PRC1.3/1.5)
130415545 (rnf2)
Noncanonical PRC1 (PRC1.6)
130415545 (rnf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-Nse
zf-RING_5
zf-RING_4
zf-rbx1
zf-RING_6
zf-UDP
TRAF3_RING
zf-C3HC4_5
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
130415545
NCBI-ProteinID:
XP_056597307
LinkDB
All DBs
Position
3:10821624..10825828
Genome browser
AA seq
336 aa
AA seq
DB search
MTQTVQTNGIQPLSKTWELSLYELQRTPQEAITDGLEIAVSPRSLHSELMCPICLDMLKN
TMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSRDEY
EAHQERVLARISKHNNQQALSHSIEEGLKIQAMNRLQRGKKHQIENGSGAEDNGDSSHCS
NASVHSNQEAGPSIKRTKTSDDSGLDMDNATENGGGDLALDGASEIELVFRPHPTLMEKE
DAALTRYIKTSGNATVDHLSKYLAVRLALEEMRKCEEANPINVEAASEKQYTIYIPTANN
QFTVLNGSFSLELVSEKYWKVNKPMELYFAPTKEHK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagacagtccaaacgaatgggattcaacccctcagcaagacctgggagctcagt
ctctatgaattacagagaacaccacaggaggccatcacggatggtctggaaatagccgtg
tccccacgtagcttgcacagcgagctcatgtgtcccatctgcctggatatgctaaagaac
accatgaccaccaaggagtgcctgcaccgcttttgtgctgactgcattatcacagctctc
agatcaggaaataaggagtgtccgacgtgcaggaagaaactggtgtcgaagcgctcgctc
cgtccagaccctaactttgacgccctgatcagtaagatttatcccagcagagacgaatac
gaggcccatcaggagagagtgctggcccgcatcagcaagcacaacaaccagcaggcgcta
agccacagtattgaagaaggccttaagatccaagccatgaacagacttcaacggggaaag
aagcaccagatcgaaaatggcagcggggcggaagacaatggggacagctcacactgtagt
aacgcatcagtgcacagtaaccaggaggccggacccagcatcaaacgaaccaaaacttca
gacgactctggtcttgacatggacaatgccacagaaaacggaggaggagacttggcgcta
gatggggccagtgagatagagctggtttttcgtcctcacccaacactcatggaaaaagaa
gatgcggcactgacacggtacatcaagacttcggggaacgcaacagtggatcacctctct
aaatatctggccgtcagactggctctcgaggaaatgcgcaagtgcgaagaggcaaaccct
attaatgtagaggccgccagtgaaaaacagtataccatctacattcccacagccaacaac
cagttcacagtcttgaacggttccttctccttggagctggtgagcgagaagtactggaaa
gttaacaagcctatggagttgtacttcgcaccaacaaaagagcacaaatga
DBGET
integrated database retrieval system
