Triplophysa dalaica: 130415585
Help
Entry
130415585 CDS
T09616
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
130415585 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tdw01007
]
130415585 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tdw03016
]
130415585 (vars2)
Enzymes [BR:
tdw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
130415585 (vars2)
Amino acid related enzymes [BR:
tdw01007
]
Aminoacyl-tRNA synthetase
Class I (U)
130415585 (vars2)
Transfer RNA biogenesis [BR:
tdw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
130415585 (vars2)
Prokaryotic type
130415585 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
130415585
NCBI-ProteinID:
XP_056597371
LinkDB
All DBs
Position
25:complement(614951..637315)
Genome browser
AA seq
1074 aa
AA seq
DB search
MWKRVHVVSLRICSKDLQKTWSAWGYRLCSSAHPPASSNKPSTQPRTQAEKAKRRREKEK
TILSSDVNDVVPVWSEKEKIRYTAALLPGEKKDTSLPFPQSYSPEYVEFGWYQWWEKQGF
FSPEQHGKQPHATDKYFSFCIPPPNVTGNLHLGHALTVAIEDALARWRRMQGYKVLWVPG
CDHAGIATQSVVERKLLREHGKLRQDYSREEFLKEVWRWKNEKGDEIYHQLRKLGASLDW
TRACFTMDPGFSSAVTEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEVDSKELSGKTF
LSVPGYQQKVEFGTIVTFAYLLEGQEGEVAVSTTRPETMLGDVAIAVHPNDPRYQDLHGK
YCRHPFTDRLLPIIADTMVDMKLGTGAVKVTPAHDHTDFLLSQRHALPRLTVIGGDGTMT
SLCGQWLEGVKRFDARERVISALMERKLFRNKQSHPMSLPICSRSGDVIEPLLKRQWFVR
CQEMAQKAVQAVEDGELQIIPEFYTKMWRNWLSNISDWCISRQLWWGHQIPAYRVTLQNS
VDPEEELWVWGRTAAEARERAAVKFGVNPDHITLTQDPDVLDTWFSSALFPFAMLGWPQQ
KEDLKQFYPNSILETGSDLIFFWVARMVMLGKELTGQLPFRQVLFHSLVRDKYGRKMSKS
LGNVIDPLDVISGVSLERLQKKIKEGNLDPRESMVAMEAQEKDFPKGIPECGTDALRFAL
CSYKAQGDDISLSVSHVLSCRHFCNKMWQAVRFTLAVLQEASSPASLAETHPVSSMDRWI
CSRLYSTVRQCEEAFESYQLHTITSALHSFWVHSLCDVYLESIKPVLKQEPSDSNEQKER
ERQVAMSVLYHSVSISLCLLSPFMPFLTEELWQRLLPYSADSIKNPTSLCVQPYPKSSQL
EHWYFPEEEADFSLAQEVVRVARLLRAQCQMTKEKPDLWAVCAPDQAQTLLHFRSAICTL
GRISKLRLHCPDGGFTDSPPPKGSVGVVDHSIRLYLSVQTGINADKQRAVLCQRREKLAN
KLKQAISRTLMPNYTEKVPDHVRQEMENKIAAMEEDLKNIEDQLLDLEHMKKQD
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgtggaagcgtgtgcatgtggtgtcactgagaatctgctcgaaagatctacagaagaca
tggagcgcatggggatacaggctctgttcatcggctcatcctccagcatcatctaataaa
ccatcaacacagcccaggacacaagcagagaaagccaaacgtagacgagagaaagagaag
actatactgagtagtgatgttaatgacgttgtaccggtctggtcggaaaaagagaaaata
agatatacagctgccctattaccaggagagaagaaagacacctccctgcccttcccacag
tcctacagcccagaatatgtggaatttggctggtatcagtggtgggagaaacagggattc
ttcagccctgagcagcatggtaaacagccgcatgcgactgataaatatttctccttttgc
attcctccaccaaatgtgacgggtaatttacatctcggacatgctctgacagtggctata
gaggacgccttggcacgctggcgtcgaatgcagggctacaaggtgctgtgggttccaggc
tgtgaccacgctgggattgcaacacagtcagtggttgagaggaagctgttacgagagcat
ggaaagctgagacaggactacagcagagaggagttcctcaaagaagtctggagatggaaa
aacgagaagggggatgaaatttatcatcagctgagaaaactgggtgcgtctctggactgg
accagagcttgtttcacaatggacccgggtttcagcagtgctgtgacagaggctttcgta
agactgtgtgactctggtctcatctatcgctctgaaggtttggtcaactggagctgtgca
ttagagtcggccatctcagacatagaggtggattcgaaagagctttcaggcaaaacattt
ttgtctgttcctggctatcagcagaaggtggaatttgggacgattgttacatttgcatat
ctgttagagggacaggaaggagaggttgcagtgtcaaccacgcgaccggagacaatgttg
ggagatgtggccattgctgtgcatcctaatgaccctcgatatcaagatcttcatggcaaa
tactgtcggcacccgtttacagatcgattgttacccattatcgctgacactatggtggat
atgaaattggggacaggtgctgttaaagtgaccccagctcacgaccacactgacttcctg
ctatcccaaagacacgcgctcccacgcctcactgtgattggaggagatggaactatgacg
tcactttgtggccagtggctagagggagtcaaacgctttgacgccagagagcgagtgatc
agtgcactgatggagaggaagttattcagaaacaagcagagtcaccccatgtcattacca
atctgcagccgttctggagatgtcattgaaccgctgctgaagagacaatggtttgtacgc
tgtcaagaaatggcacaaaaagcagttcaagcagtagaagatggggagctacagatcatt
cctgagttttatacaaaaatgtggaggaactggctgtctaacatcagtgattggtgcatt
tctagacaactttggtggggtcatcagataccagcctatcgagtgacactacaaaactct
gttgacccagaagaggagctgtgggtttggggccgaactgctgcagaggctcgggaacgt
gctgctgtgaagttcggagtgaatccggatcacatcacgctcacacaggacccagatgtg
cttgatacctggttttcttcggctctttttccattcgccatgctcggctggccccagcag
aaagaagacctgaaacaattctaccccaactccattctggaaacaggaagtgacctcatc
tttttctgggtggccaggatggtgatgctgggcaaggagttgactggccagctgcccttt
agacaggtgctctttcactctttggtgagagataaatatgggcggaagatgagtaaatct
ttaggaaatgtcattgatccactggatgttatttcaggcgtctctctggagagacttcaa
aagaaaatcaaagaaggaaacttagatccgagagagagcatggttgccatggaagcgcag
gagaaagatttccctaaaggtattccagagtgtgggacggacgctttgaggtttgctctc
tgctcttacaaagcccagggagacgacatcagcctgtccgtgtcccacgtgttgagctgt
agacacttctgtaataagatgtggcaggcggtacgcttcacccttgctgtgttgcaagag
gcgagttcacctgcatcattagcagagacacatccggtctccagcatggacaggtggata
tgttcaagactgtacagcacagttcggcagtgtgaagaggcttttgagagctaccagctt
cacaccattacctctgcactgcattccttctgggtccacagtctctgtgatgtctacctg
gagagcatcaagcccgtgctaaaacaagaaccctcggacagcaatgagcagaaggagaga
gagagacaggtggccatgtctgtgttgtatcacagtgtgtctatttctctgtgtctcctc
tcgcccttcatgcctttcctcacagaggagctgtggcagagactcttgccttacagcgcc
gactccatcaaaaaccccaccagcctgtgcgtgcagccctatccaaagtcctcacagttg
gagcactggtattttcctgaggaggaagcagatttctctttggctcaggaagtggtcaga
gtggcgaggttactgagggcccagtgccagatgacgaaagaaaaacctgacttgtgggca
gtgtgtgcacctgatcaagctcagacccttctgcacttcagatctgctatctgcaccctg
ggtcgcatctcaaagctgcgtctgcactgtccagatggaggtttcacggactcacctcca
cccaagggcagtgtaggggtggtggatcattccattcgcttgtatctcagtgttcagact
ggtattaatgctgacaaacagcgagcagtcctctgtcagcgcagagaaaagctggccaac
aaactcaagcaagccatctctcgcacacttatgcccaactacacagagaaagttcctgat
catgtcaggcaagagatggaaaataagattgcagccatggaggaggatctgaagaacatt
gaggatcaacttttggatttggaacacatgaagaaacaagactga
DBGET
integrated database retrieval system
