Triplophysa dalaica: 130415727
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Entry
130415727 CDS
T09616
Symbol
exosc7
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
tdw
Triplophysa dalaica
Pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130415727 (exosc7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130415727 (exosc7)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130415727 (exosc7)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
130415727 (exosc7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DDE_Tnp_4
Motif
Other DBs
NCBI-GeneID:
130415727
NCBI-ProteinID:
XP_056597582
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Position
25:complement(15454511..15456976)
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AA seq
291 aa
AA seq
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MAAVHLSEAEKVYIIHGVRDDLRLDGRGCEDYRHMEIETDVVSNTDGSAKISLGHTDVLV
GIKAEIGKPKPMVPNEGYLEFFVDCSANATPEFEGRGGEDLGVELSNTLYKVFNNRLSVD
LRSLCISPGEHCWVLYVDVLLLQCDGNLFDAMSIAIKAALFNTRISKVQLSEDEEGGKEI
ELSDDPYDCMRLDVENVPCIVTLCKIGQRHVVDATLQEKACSVASVLISVTHRGTVTCVR
KMGKGSLDPESIFEMTEAGKRVGKSLHAPLMRLLQEEESLCQKRQKVGFLG
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcagcggttcacctgagcgaagctgagaaggtttatataatacacggagttcgggat
gacctgagattggacgggcgaggatgtgaagactacagacacatggagatcgagacagat
gtggtgtccaacaccgacggttctgctaaaatcagtcttggtcacacagatgttcttgta
ggaatcaaggcagagattggtaaacccaaacccatggtaccaaatgaaggctatctagag
ttttttgttgactgctcagcgaatgccacccctgagtttgaggggaggggcggagaggac
ctgggggtggagcttagcaacaccctgtataaagtgtttaacaacagactcagtgttgat
ctgagatccctctgcatctctccgggagagcactgttgggtgttgtatgtggacgtgctg
ctgctgcagtgcgatggaaacctgtttgatgcgatgtccatcgcaataaaagctgctctg
ttcaacacgcgaatttccaaagtgcaattatctgaggatgaggaggggggcaaagagatc
gagctgtcagatgacccttatgactgcatgaggctcgatgtggagaacgttccctgtatc
gtaaccctgtgcaagatcggtcaaagacatgtggtggatgccactctgcaggagaaagcg
tgttcagtggccagtgttctgatatcagtcacacacagagggacggtcacatgtgtgagg
aagatgggaaagggcagtctggaccccgagagcatctttgagatgacagaggccggaaag
cgtgtggggaaatctctacatgctcctctcatgcgactgctgcaggaagaagaaagtctg
tgccagaaacgacagaaagtgggtttcctcggatag
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