Triplophysa dalaica: 130415900
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Entry
130415900 CDS
T09616
Symbol
sdc3
Name
(RefSeq) syndecan-3
KO
K16337
syndecan 3
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecule (CAM) interaction
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
130415900 (sdc3)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130415900 (sdc3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tdw00535
]
130415900 (sdc3)
Proteoglycans [BR:
tdw00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
130415900 (sdc3)
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Motif
Pfam:
Syndecan
DUF1180
SDH8
Motif
Other DBs
NCBI-GeneID:
130415900
NCBI-ProteinID:
XP_056597881
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Position
25:7067850..7091841
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AA seq
395 aa
AA seq
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MKLPCWITLALLLAQTALAQRRKSRPVDEDSSGDEPYDDEDFFSGSGSGFPDIDVSPTGA
GVSVTTEEPLPLSTTQATGPAPSASPAAEPSRPPPPEVERESGMGQEVDREVEIQKKWEE
EMQRPNEQDEVSEKGEWEEKSKATVAPRLTEVPMVAMDSTTILDEITVAPSEWEEPSNSE
KDDLFITTEITIFEPSSTTQMTDDITTIEVLPTTVASTTAKPTRPVPTTPSTSPPRPRQP
QTTPSRATPTESSTNTVMSSTVQTQTPYETVNNEVAGAGPSGDFEIREDEVRQGNEVSRG
KAAPGVPAEPDLTGNSIDAAGSSAAQLPQKNILERKEVLIAVIVGGVVGALFAAFLVMLL
VYRMKKKDEGSYTLEEPKQATVTYQKPDKQEEFYA
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcccgtgctggataacactggcgcttctgctagcgcagaccgcactggctcag
cggcgcaaatcacgaccggttgacgaggatagttctggagatgagccgtatgatgacgaa
gacttcttctctggttctggatctggctttccagatatagatgttagtccgaccggagca
ggtgtgtctgtcactacagaggagcccctcccactttccacgacacaggccactggcccc
gccccctctgcctccccagctgcggagcccagtaggccaccaccacctgaggtagaacga
gaaagcggaatgggacaagaagtagacagggaagtggagattcagaaaaagtgggaggaa
gaaatgcagaggccgaatgagcaggatgaagtatctgagaaaggagaatgggaagaaaag
tcaaaggctacagtcgcacctcggcttactgaagttcccatggtggccatggactcaacc
acaattctggatgagattacagtggctcctagtgaatgggaggagcccagcaactcagaa
aaagatgatttgttcattactacagaaattaccatatttgagccatccagcactacgcaa
atgacagatgacatcacaaccatcgaggtgctacccaccactgttgcgtcaaccacagct
aagcccaccagacccgtcccgaccactcctagcacctctcccccacgaccccggcaacca
cagaccacccccagtagagccaccccgaccgagagcagcacaaatacagtgatgagctca
acagtacagacacaaacaccatatgagactgtaaataatgaagtcgctggagcaggtcca
agtggtgattttgaaatccgagaggatgaagttcgccaaggcaacgaggtcagtcgaggc
aaagcggccccgggcgtaccagcagagcccgatttgactggcaactccatagatgcagct
ggaagctcagctgctcagcttccacagaaaaacattcttgagcggaaagaagttttgata
gcggtgattgttggaggtgtagtgggagcgctattcgccgccttcctcgtcatgctactc
gtctatcgaatgaaaaagaaagacgaaggcagctacacactggaggagcccaaacaagcc
acagtcacctaccagaagcccgacaagcaggaagaattctatgcctaa
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