Triplophysa dalaica: 130415970
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Entry
130415970 CDS
T09616
Symbol
vps50
Name
(RefSeq) syndetin
KO
K23288
syndetin
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130415970 (vps50)
Membrane trafficking [BR:
tdw04131
]
Protein recycling
Others
EARP complex
130415970 (vps50)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
Motif
Other DBs
NCBI-GeneID:
130415970
NCBI-ProteinID:
XP_056597988
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All DBs
Position
25:6023768..6141801
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AA seq
957 aa
AA seq
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MQKIKSLMARQGLKSPQESVVDMSPVENLRTPSKEELRELREQPTDPQAEQEIIDSIEEV
YFSSDSFDMVQYELEKLPPDLNLQELEEYRDKLKRQQAAVSKRVADLILEKQPSYVKELE
RVTSLQTNLQLAAVICTNARRQLRSSKEGFTEASLGLLANQRRRQLLTGLLKSLRTIKTL
QRTDVRLSEMLEEEDYPGAIQLCLECQKAASTFKHYNCISELNSKLQDTLEQIEEQLDVA
LSRTCKHFDVSHYTKVQLAYKLLGKTQTAMDQLHMHFTQAIHNTVFQVVLGYVELCAGNA
DTKFQKMQYRDLCTHITPDSYIPCLTDLCKALWEVMLSYHLTILWHDEHYKEEEAAPAAD
DSTVGRSYVKKKLEHGLTRIWQDVQLKVKAYLLGTDMSNFKYDDFIVVLDVISRLMQVGE
EFCGSKSEVLQESIKRQSVNYFKNYHRTRLEELRMFLENETWELCPVKSNFSIAQLHEFK
FMGQCRSPSVSPSRQSESIDPVDLSLFEQYLQGGNPFEMQIDNKEDETEDVLASNGYESD
ELEKCVYQDYDSDSDVADELKQDYVDEQTGDVPVKSVSRETLRSQKRSDYNLNRANAPIL
TNTTLNVIRLVGKYMQMMNILKPIAFDVIHCVSQLFDYYLYAVYTFFGRNDMYESSGLGL
ISSRLRTTLSRIQESLIDMEAGGETAGPHAPAEERKEKVPSPHLSQLVVLTASETLYGLA
ERVVATESLVFLAEQFELLQPHLDTMMPSAKKPFLQQFYSQTVSTASELRKPIYWIVAAK
AIDYEQMLLLMVGVKWDIKEIMSQHNVYVDVLLKEFEKFNQKLEDVSKIVRIPLPVSNVL
WEHCIRLANRTLVEGYANVKKCSNEGRALMQLDFQQFLMKLEKLTDLRPIPDKEFVETYI
KAYYLTENDMEQFIKNHREYSMKQLTNLVNVCLGSHINKKARQKLLSAIDDIDRPKR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatcaagtctttaatggcccgtcagggcctgaaaagtcctcaagagagtgtg
gtcgacatgagccccgtggagaacttaaggacccccagcaaggaagagctgcgggaactg
agagagcagcccactgatccccaggcagagcaggaaatcatcgacagcatcgaggaagtg
tacttttccagcgactccttcgacatggtgcaatacgagctggagaaactccctcccgat
ctgaacctccaggaactcgaggaatacagagataagctgaagagacaacaagcagccgtg
tctaaaagagtggcagaccttattctggagaaacagccttcgtatgttaaggagcttgag
agagtgacgtctcttcaaactaatctgcagctggctgccgtaatctgcacaaacgcacgg
agacagcttcgttcttctaaagagggctttactgaagccagtctggggcttttggccaat
cagagacgccgacagctgttgacaggattgctgaaatctttgaggaccataaagactcta
caaagaactgatgttagactcagcgagatgctggaggaggaggattatccaggagccatc
cagttgtgtttagaatgccagaaagccgccagcactttcaaacactacaactgtataagt
gagttgaattccaaactgcaagacaccttggagcaaatagaggaacagctagatgtggct
ctgtccagaacctgcaagcactttgatgtctctcactacaccaaagttcaactggcgtat
aagcttctgggcaaaacacagactgccatggaccagctgcacatgcacttcacgcaagcc
atccacaacactgtcttccaggtggttctgggatacgtggagctgtgcgctggcaatgcc
gacaccaagtttcagaagatgcagtacagggatctatgcacgcacattaccccagacagc
tacatcccctgcctaacagacctctgcaaggcattgtgggaggtgatgctcagttaccac
ctaaccattctgtggcacgatgaacactacaaagaagaggaggcagctcctgcagcagat
gactccaccgtgggccgcagttacgtgaaaaagaagctggagcatggtttaacccggatc
tggcaggacgtccaattgaaagtgaaagcctatttgctgggaacagacatgtccaacttc
aagtacgacgacttcattgtggtgctggatgttatcagcaggttaatgcaggtgggagag
gagttctgcggaagcaagtcggaggtattacaggagtccattaagagacagagcgtaaac
tactttaagaactaccacagaacccgcctggaggagctgcgcatgtttcttgaaaacgaa
acatgggagctgtgccctgtgaagtccaattttagtattgcacagcttcacgagtttaag
ttcatgggtcagtgtcgttctccctcagtgtctcccagcagacagtcagaatccatcgat
cctgtggatctttctctctttgagcagtacctacagggcggaaacccgtttgagatgcag
atagataataaggaagacgaaacagaggatgtcctggcttccaatgggtatgagtcagat
gagctggagaagtgcgtgtatcaggactacgacagtgatagcgacgtagccgatgagctg
aagcaggactacgtcgatgaacaaacaggagacgtgcctgtaaagagcgtgtccagagag
accctccgcagccagaagagatctgactacaatctcaacagagccaatgcccccatcctt
accaacaccaccctcaacgtgattcgtcttgtcggtaaatacatgcagatgatgaatatt
ctgaagcccatcgccttcgatgtcatccactgtgtctctcagctctttgattattacctt
tatgccgtctacaccttcttcggccgcaatgacatgtacgaatcttctgggctgggtctg
atcagcagcagactgaggactactctcagcagaatccaggagagccttatagatatggag
gctggaggagaaaccgcaggtcctcatgcacctgctgaggaaaggaaggagaaggtcccc
agtcctcacctcagtcagctggtggtcctcacggctagcgaaacgctctacggtttggca
gagagagtcgtcgccacagaatctctagtttttctggcagagcagtttgagcttcttcag
ccccatctcgacactatgatgccttcagccaagaagcctttcctccagcagttctactca
cagactgtatctacagccagtgaactccgaaagcccatttactggatagtggcagccaaa
gccatagattacgaacagatgcttttgctgatggtgggagtgaaatgggacattaaagag
ataatgtcacagcacaatgtctacgtggatgtccttttaaaggagttcgagaagttcaac
cagaagcttgaagatgtttcgaaaatagttcggattcccctgccagtctccaatgtctta
tgggagcactgcatccgtctggccaacaggacattggtggagggctacgccaacgtgaag
aaatgcagtaatgaaggacgagcgctaatgcagttggacttccagcagtttctgatgaag
ctggagaagctcacagacctcaggccaattcctgataaggagtttgtggagacctacatc
aaagcgtactacctaactgaaaatgacatggagcagttcatcaagaaccacagggaatac
tcaatgaagcagctgaccaacctggtcaacgtctgcctggggtcccacatcaacaagaag
gcgagacagaagcttctctcagctatcgatgacattgaccgtccaaaaagataa
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