Triplophysa dalaica: 130416023
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Entry
130416023 CDS
T09616
Symbol
stx1b
Name
(RefSeq) syntaxin-1B
KO
K08486
syntaxin 1B/2/3
Organism
tdw
Triplophysa dalaica
Pathway
tdw04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
130416023 (stx1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130416023 (stx1b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130416023 (stx1b)
Membrane trafficking [BR:
tdw04131
]
SNARE
Syntaxin (Qa)
Stx-PM
130416023 (stx1b)
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
130416023 (stx1b)
Exosomal proteins of other body fluids (saliva and urine)
130416023 (stx1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
AAA_13
Lzipper-MIP1
Spectrin_Anc-1
Relaxase_C
GNVR
Baculo_PEP_C
DUF4658
ARM_ECM29
TolA_bind_tri
VBS_C3G9
CAP_N
Motif
Other DBs
NCBI-GeneID:
130416023
NCBI-ProteinID:
XP_056598085
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All DBs
Position
25:13178039..13214088
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AA seq
288 aa
AA seq
DB search
MKDRTQELRSAKDSDDDEEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAI
LAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHS
TLSRKFVEVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDI
KMDSQMTKQALNEIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSV
DYVERAVSDTKKAVKYQSQARKKKIMIIICCVILGVVLASTIGGTLGF
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcgcacgcaggaactacgaagtgctaaggacagtgatgatgatgaagaagtc
gttcacgttgaccgagatcactttatggatgaattttttgaacaggtggaggagatccgc
ggctgtattgaaaagctgtcagaggatgtagaacaggtgaagaagcagcacagtgccatt
ctagcagcacctaaccctgatgaaaagaccaagcaggagttggaggacctcacagctgac
atcaagaagacagccaataaagtgcgctctaaattaaaagcaatcgaacaaagtatcgag
caggaggaaggtttgaacagatcgtctgcagatttgcgaatccgtaagacacagcattcc
acgctgtcacgcaagtttgtggaagtgatgacagagtacaacaccacgcagtccaaatac
agggaccgctgcaaggaccgcattcagagacaactggaaattactggcagaacaaccacc
aatgaggagctggaggatatgctggagagcgggaagcttgccatctttactgatgatatc
aagatggactctcagatgaccaagcaggcactaaatgagattgagacccgacacactgag
atcatcaagttggagaacagcattcgtgagctgcacgacatgtttgtggatatggccatg
ctggtggagagtcagggagaaatgattgacagaatcgagtataacgtggaacactctgtg
gactatgtagagagagcagtttcagacaccaagaaggctgtcaaataccagagtcaggca
cgcaagaagaagatcatgatcatcatctgctgtgtaattttgggagtggttttggcatcc
accatcggaggaaccctgggcttctaa
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