Triplophysa dalaica: 130417201
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Entry
130417201 CDS
T09616
Symbol
acin1a
Name
(RefSeq) LOW QUALITY PROTEIN: apoptotic chromatin condensation inducer in the nucleus
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
tdw03015
mRNA surveillance pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130417201 (acin1a)
09122 Translation
03013 Nucleocytoplasmic transport
130417201 (acin1a)
03015 mRNA surveillance pathway
130417201 (acin1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130417201 (acin1a)
03041 Spliceosome [BR:
tdw03041
]
130417201 (acin1a)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130417201 (acin1a)
Spliceosome [BR:
tdw03041
]
Complex C
Other components
EJC/TREX
130417201 (acin1a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
AJM1_N
Motif
Other DBs
NCBI-GeneID:
130417201
NCBI-ProteinID:
XP_056598529
LinkDB
All DBs
Position
3:complement(1718781..1733450)
Genome browser
AA seq
1625 aa
AA seq
DB search
MADLEDVTLDGRPLHSLRVADLKAALEERGLPKSGQKNALIKRLKGALMLENLQKTSSHH
IGLQPNSRIGEEMSQNSFIKQYLAKQQELLRQRLEREAREAAENDGTDQDDHTEANDSKV
CAAPAQDDQHKPTASEVDDNSEKEQPSPSVPAQPGAIASLSVRVVGERESTSSRAAADSD
DDSEGGDDNENDKEECKMNAQRSVPKSQPVRERSGGSQQQQHPPPQHIPLLSQQLRQPTP
PPSPPPELSFPLPDTPKQSPPSPGELPSRQRMSSSSSSGSSSSDSRSSSPEPAGDSSERR
PGPLTLLARKMESEGAFSGAGKHEREAVDRQGVPAGRGHKEGGVSAITHTANAASVLSYP
SSVISNQGVSVVRTAVIEESDATKQDGDHLLWEQERQKEQERQKALEKEREEREKALEQE
RQEREEALRREREERERALQREREEKAKALELERERALERERALERERLEREQALERERI
EKEQALERERVEREKALERERLERERIEREQALEKERIERKKALEMERLERERIEIERLE
RERVEREKALERERLERERIEREKALELERLERERLERERALEKERLEREQALERERIEK
EQALERKRLERERIEKEQALEKERLEREAALERERQEMEKERKRQEMEKERKRQEKQERD
MALERERLEKEKAALEKERLQREKALEREEAQKKAEEEKERALEKEREERALQEEKQRAV
AEKEVRAREEKEKALKQEREEEREKERESRLPPLKRGRDIGGFSRSVAHPESQSDKPEDS
EDARSTEPFPKESPTPTTPLSSQLSSKKSRFLRDAPTTPLPSSPASVLKRPRSFSDKPVP
QAPVIPLAAIPGDAVQDGADQASQTPLETVRQKVVVSAPHGLESKTPEVGDQKHEVEKMV
VSEAPKALKDNEASIYTKPGRVEDEGKSPLPPPGEKKRGRERDKKEVEKRERKSSSSSDS
SSSDSDSGSSSSSRSSSSSSSSQEKTRTSSAGKKSKEIQKESTKHMDEVSKSKAVIEKPP
TAQRKKRIFTEQEEKDVSNVDVVQTKRPCLEQQDEKGTGGRKEHIGEDDIMENTTSSEVK
ETVMAEPEKLPESSEESTTPKTFCARKISLSSSKPSPGVLNSEGETESTSGAAAGRKRRW
GSSTAVTAKKPSISITTDSLKSLIPDIKPAQGQEAVLDLHSEEVPLSGDEEGGERGDQDL
KIRRTVTQVVPSDTQENGQKESKRDDPGDEEERNDRQDRLSQEEKMEDSVQISMDAETSS
PGHDVDMKTVTHSDTLIRRSISQQKSGVSITIDDPVRTSKQPSPPRSKLSNIIHICNLVR
PFTLGQLKELLNRTGAVVEDSFWIDKIKSHCYVTYSSTEEAMATRTALHGVKWPQSNPKF
LSVDFCNQEELDFHRGLGPAGEKPPEETQRVAAAGPGRTVPPPLLPERDQWAEREREMER
RERARADREWDRDKVKDLSKPGEEREAAARRSRSRERERRRKERGKSKERKTEKKEKGPE
EPPAKLLDDLFRKTKAAPCIYWLPLTEELAVQKAEARAERMREREKRRKEMEEEEVKKRE
EERRERMKPSVAAAGDGERDRDRGRERDREGDKRKEGYRRPGGNSASGSRRSRSRSDPPP
RDRRR
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atggcggacctcgaagacgttacgctagacggcaggccgctccattcgctccgggtagcg
gatttgaaagccgcgttggaagagagagggcttccgaaaagcggacagaagaatgctctc
atcaagaggctgaaaggggctctcatgttggagaaccttcagaaaacctcttctcaccac
attggcctgcagcccaactcccggattggggaggagatgagccagaacagtttcattaaa
cagtacctggcgaaacagcaagaactgctcaggcagcgcttggagagagaggcacgggaa
gcggctgagaatgatggaacagatcaagatgaccacacagaagccaatgacagcaaggtc
tgtgctgcccctgcccaggatgaccaacacaaacccacagcaagtgaggttgatgataac
agtgagaaagaacagccatcaccctctgtacctgctcagcctggggcgatagcttctttg
tcagttcgggttgttggtgaaagagagtctacctcaagccgtgcagcggccgacagtgat
gacgacagcgagggcggggacgacaatgaaaacgacaaggaagagtgcaaaatgaatgct
cagagaagtgtgccaaaaagccagccggtgagggaaagatcaggtggctcacagcaacag
cagcatccacccccccaacacatacccttgctatcacagcagctgagacagcccactccg
cccccatcccctccacccgaactctcattcccactcccagacacccctaaacagagcccc
ccaagtccaggagagctcccgtctagacagcgcatgtctagctcttccagctccggcagt
tcgagcagtgacagtcgtagcagtagccctgaaccagcaggcgattcctccgaacgcaga
ccaggccctctgaccttactggcgcgaaagatggagtctgaaggagctttctctggagct
ggaaagcatgaaagagaggctgttgatagacagggtgtacctgcaggacgaggccacaaa
gagggaggcgtgtctgcaattactcacacagccaatgcagcatcagttctgtcatacccc
agttcggtgatctctaaccagggagttagtgtggtcaggacagcggtgatagaagagagc
gatgccacgaagcaggacggggaccatcttttgtgggagcaggaaagacaaaaagaacaa
gagaggcagaaagctcttgaaaaggagagagaggaaagggagaaggcattggagcaggaa
aggcaggaacgagaagaggctcttagacgcgagagggaagagagagagagggctttacaa
cgagaacgggaagagaaggccaaggcgttggaactagagagagaacgagcgctggaaagg
gagcgagcgttagagagagaaaggctggaaagagagcaggctctggaaagggagaggatt
gaaaaagaacaggctctggagcgagagagggttgaaagagaaaaggccctggaaagggag
agactggagagagagaggatcgagagagagcaagctctggagaaagagaggatcgaaaga
aaaaaagctctagaaatggagagactggagagagagaggatagagatagagagactggag
cgagagagggtagaaagagaaaaagctctggaaagagagagactggagcgcgagaggata
gaaagagaaaaggctctagaattggagagactggagagagagagattagaaagggagcga
gctctagaaaaagagaggctggagcgagagcaagctctggagagagagaggatagaaaaa
gagcaagctctggagaggaagagactggagagagagaggatagaaaaagagcaagctttg
gagaaggagaggcttgaaagagaagccgctttggagcgagagagacaagaaatggagaaa
gaacgcaagagacaagaaatggagaaggagcgaaagagacaggagaagcaagagagagac
atggccttagaacgagaaagactggagaaggagaaagcagctttggaaaaagagcggttg
cagagagagaaagctctcgagcgtgaggaggctcaaaagaaagcagaggaggagaaagag
cgtgccttggaaaaagagagagaggagagggctttacaagaggagaaacagagagcagtg
gcggagaaggaagtaagagctcgggaagaaaaggaaaaggctttgaaacaagaacgagag
gaggaacgagagaaagaaagagaaagccgtcttcctccgctgaagcgtggtcgtgatatc
ggtggtttctctcgttcagtggcccatcctgagagtcagtcggacaaacctgaggatagt
gaagatgctcgatctacagagcctttccctaaagagtcacccacacctacgacaccatta
tcctctcaattgtcttctaagaagtctcgctttctcagagatgctcccacgactcctctc
ccatcctctccagcttctgtcttaaagagacctcggtccttctcggacaaacccgtgccg
caagctcctgtaattccattagcagctatacctggagacgcagtacaagatggtgccgat
caggcttctcaaacacctcttgagactgtgaggcagaaggtcgttgtttcagctccccat
gggttagaaagcaagaccccagaagtgggtgatcagaaacacgaggtagagaagatggtg
gtatcagaggcacccaaagcgctgaaggacaatgaagcgagcatatacactaaacccggg
agagttgaggatgaagggaaatctccattgcctcctccaggagagaagaaaagaggaagg
gaaagagacaagaaagaggtggagaaaagagaaagaaaatcgtcatcgtccagcgatagt
tcatcatccgattcggattctgggtcttcatcctcctcgcgttcctctagttcatcatca
tcctcgcaggagaaaacccgtactagttcagctggtaaaaagtcaaaggaaatccagaaa
gagtctacgaagcacatggatgaagttagcaaatctaaagctgtgattgaaaagccacca
acagcccagcgcaaaaaacgaatcttcacagagcaggaggagaaagatgtcagcaatgta
gacgtcgttcagaccaagagaccctgccttgagcaacaggatgagaagggaacaggagga
agaaaggaacatattggggaagatgatattatggaaaacactacaagtagtgaggtgaag
gagacagtcatggccgagcccgagaagctaccagagagcagcgaggagagcaccacgcca
aagaccttctgtgcccggaaaatctcactcagcagcagcaaaccgtctccgggagtgctg
aattcagaaggggaaactgagagcacaagcggggcagctgctggcaggaagaggagatgg
ggctcaagtacagctgtcactgccaagaaaccctccatcagcatcaccacagactcatta
aagtctttaattcctgacatcaagcctgctcagggccaggaggccgttctagatctgcat
tcagaagaggtgcctctttctggggacgaggaaggcggggagagaggtgaccaagacctg
aaaatcagacgaactgttacacaggtcgtgccctctgacacacaagagaatggacagaag
gaatcaaaaagggatgatcctggagatgaggaggaaagaaacgacagacaggatagactt
agccaggaggagaaaatggaagactctgttcagatttccatggacgcagagacttcttcc
cctggccatgatgttgacatgaagacggtgactcacagtgacacactgatcaggcgttcc
attagccagcagaagtctggagtgagcatcaccattgatgacccagtccgcacatccaag
caaccgtctcctcctcgtagcaagctgtctaacatcatccatatctgcaacctggtgaga
ccatttacactgggccagttgaaagagctgctgaaccgcaccggtgctgtagtcgaggac
agtttctggatcgacaagattaaatctcattgctacgtcacatactccagcacagaagag
gcaatggccacacggacggcactacatggggtcaaatggccccagagtaatccaaagttc
ctcagtgttgacttctgcaatcaggaggaattggactttcatagaggtctaggtccagcg
ggagagaagccaccggaggagacccaaagggtagcagctgccgggcctggccgtacggtt
cccccacctctccttccagagcgtgaccagtgggctgaacgagagagggagatggaaagg
cgggaacgagcacgtgcagatagggaatgggacagagataaggtgaaagacttaagcaaa
ccaggagaagaacgggaggctgcggccagacgatcgcgatctagagagcgtgagcgaagg
cgtaaggaaagagggaagagcaaagagagaaagacagagaagaaggaaaaaggtcccgag
gagccacctgctaaactgctggatgacctgttccgcaaaaccaaagcagcaccctgcata
tactggctccccctcactgaagaactggcagtacagaaggcagaggctcgtgccgagcgc
atgagagaaagagagaagaggagaaaggagatggaggaggaagaggtcaaaaagcgggaa
gaggagcgcagggagagaatgaagcccagcgttgccgccgcaggagacggcgagagagac
cgtgaccgaggtcgcgagagggatcgggagggggacaagcgaaaggagggatatcgcagg
cctggcggaaacagcgcgagcgggagcagaaggtcacgaagccgcagtgaccctccacct
agagatcgacgacgctaa
DBGET
integrated database retrieval system
