Triplophysa dalaica: 130417297
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Entry
130417297 CDS
T09616
Symbol
puf60a
Name
(RefSeq) poly(U)-binding-splicing factor PUF60a isoform X1
KO
K12838
poly(U)-binding-splicing factor PUF60
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130417297 (puf60a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130417297 (puf60a)
Spliceosome [BR:
tdw03041
]
Complex A
U2 snRNP components
U2 related factors
130417297 (puf60a)
Complex B
130417297 (puf60a)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
BAF1_ABF1
DUF1543
Motif
Other DBs
NCBI-GeneID:
130417297
NCBI-ProteinID:
XP_056598726
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All DBs
Position
3:6188802..6201268
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AA seq
572 aa
AA seq
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MAVAVSAVNGGEALMMENGQSTASKLGLPPLTPEQQEALQKAKKYAMEQSIKSVLVKQTL
AHQQQQQLTNLQLPNSLQMASLTMGFGDPLSPLQSVAAQRQRALAIMCRVYVGSIYYELG
EDTIRQAFAPFGPIKSIDMSWDSVTLKHKGFAFVEYEIPEAAQLALEQMNSVMLGGRNIK
VGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHPDLSDDDIKSVFEAFGRIKSCMLARDP
TTGKHKGFGFIEYDKAQSSLDAVSSMNLFDLGGQYLRVGKAVTPPMPLLTPTTPGGLPPA
AAVAAAAATAKITAQSFYMQKDNIACKLQKQMAWNLSQPENRTEEFLNCLEAVAGASILG
AMSAGTGLSLPQIPQAVMAAQAPGVITGVTPARPALPVVPQVGLVNPVLSSPPSLSAAVA
AAQEAKKEKEKKEEEESAQDGTGQEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLR
NMVGPEDIDDDLEGEVTEECGKFGVVNRVIIYQEKQGEEDDAEVIVKIFVEFSVVSEMNK
AIQALNKRWFGGRKVIAEVYDQERFDNSDLSA
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggctgtttcagcggtaaatggaggcgaggctctgatgatggagaatggacag
agcacggcctcgaagctcggcctgccgccccttacccctgaacagcaggaggcactgcag
aaggctaagaagtatgccatggaacaaagcatcaagagcgtcctggtcaaacagacactt
gctcatcagcagcaacagcagctcactaacctacagctccctaattcccttcagatggcc
tcattaaccatgggttttggagatcccctctcaccactacagtctgttgcagcccagagg
caacgagcattagccataatgtgcagggtttatgttgggtctatctattacgagctagga
gaagacacaattcgacaggcctttgctccttttggtcccatcaaaagcattgacatgtct
tgggactctgttacattaaagcacaagggtttcgcctttgtggagtatgaaatacctgaa
gcagcacagcttgcgttagaacagatgaactctgtcatgctgggcggtagaaacattaaa
gtgggacgaccttcaaacatcggtcaggctcaaccaatcatagaccagttagccgaagaa
gcgcgcgccttcaaccggatttacgtggcgtccgtacatccagacctgtcagacgatgac
ataaaaagcgtgttcgaagccttcggaagaatcaagtcctgtatgctggcgcgggatccc
accacgggaaagcacaaaggctttggttttatagaatatgacaaggcccagtcctcgctg
gatgccgtgtcctccatgaacctcttcgatcttgggggccagtacctgcgagtgggcaaa
gccgtcacgcctccaatgccccttcttacgccaaccacgccaggcggccttcctcctgcc
gcagctgtagcggcagcggccgccacggccaaaatcaccgctcagagtttttacatgcag
aaagataacatagcgtgtaaactccaaaaacagatggcatggaatctgtcccagccggag
aatcggacagaagaattcctcaactgtctggaagcagtggcgggagcatcgatcctggga
gcaatgtccgctgggacgggcttgagcctgccccagatccctcaggccgtcatggcagct
caggccccaggggtcattacaggggtgacgccagcccggcccgctctgcctgtcgtgcct
caggtgggtctagtgaacccggtgctatcctctccgccatcactgtcagctgcggtagct
gctgctcaagaggccaaaaaggagaaggagaagaaggaagaggaggaatctgcccaagac
ggcacgggacaggagatgcttagtgaacaggagcacatgagcatctcggggagcagtgca
aggcatatggtcatgcagaaactgctgagaaaacaagagtctacggttatggtgctcagg
aacatggttggccctgaggacattgatgatgatctggaaggagaagtcacggaggaatgc
gggaagtttggcgttgttaatagagtgattatctaccaggagaagcagggtgaggaggac
gatgctgaagtcatagtcaagatctttgtggagttttcagtggtatcagagatgaacaag
gccattcaggcccttaacaaacgctggttcggaggtcggaaggtcattgccgaggtgtac
gatcaggagcgattcgacaacagtgacctctctgcatag
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