Triplophysa dalaica: 130417307
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Entry
130417307 CDS
T09616
Symbol
sbno2a
Name
(RefSeq) protein strawberry notch homolog 2a isoform X1
KO
K26273
protein strawberry notch
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130417307 (sbno2a)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
130417307 (sbno2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130417307
NCBI-ProteinID:
XP_056598761
LinkDB
All DBs
Position
3:24862618..24892243
Genome browser
AA seq
1613 aa
AA seq
DB search
MVIVCLEGVALPGFWFCVCGLHKPHTFCWVSQVVLNSPASALPSQLCPSNSWAFSQQTQY
SQHYPMQSGRSFQSNPSSGNLDLSDIDFQDLVRNGDFPQDLSCIDELSNTSLFSSPSDSL
SEYTEPSGFGTDSLAQLPSEGTAAQGYWVTPGHSQRQQSVFPTKLEDINAILSASVPGLR
AAPPPQEEEEEADDEETEELGHADTYAEYKPSKSTIGISHPDIVVETNTLSSVPPPDITY
PLSIPESTITSGLLSALQLEAIIYACQQHEVILQNGQRAGFLIGDGAGVGKGRTVAGIIL
ENFLKGRKKALWFSVSNDLKYDAERDLKDINAPNIPVFALNKIKYGDTATSEGVLFATYS
ALIGESQAGGQHRTRLKQIQEWCKPNFDGVIVFDECHKAKNATATKMGKAVLDLQTKLPL
ARVVYASATGASEPKNMIYMSRLGIWGLGTPFKAFDDFLHAIEKRGVGAMEIVAMDMKVS
GMYIARQLSFSGVSFRIEEITLDEEFKLVYNRAARLWAEALESFTRAADILGLASRKSLW
GQFWSAHQRFFKYLCIAAKVRRLVELARVEMQHGKCVVIGLQSTGEARTREVLDENDGHL
DRFVSAAEGVFHSLVQKHFPTEKREKRTTGKRKRKPKGRASKFPKHCVEVGGVIKISDDS
DSDSDEVDSESNSSPESLQDNDDVIFVNHINGPAAKLLEDKQRLLGKIAELGKDLPLNTL
DELIDRFGGPERVSEMTGRKGRVVRRPDGSVRYETRAEQGLTIDHVNIREKERFMTGEKF
IAIISEAASSGISLQADKRVQNRRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPDYIF
LISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSQYNFENKYGTKALDKITKAIL
GHIDNKVPPPKGYPGGDLMFFRDMKKGMIDVGIFCREPRLGLNTEKDCTITKFLNRILGL
EVYQQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIHEETQEKFLTPGNPQEG
QVILYKISVDRGMPWDEACSKAEKFTGDYEGFYLSNKLRGSQPCVLLAEQGRGRNLILYK
PNIGKQAHPENLDNLLLRYYKVMPDEAKHYWESQFVFSFTKCSHANWKGTCKLIEEGHEC
LLGMRLRQYHMLCGALLRVWKRVSDIVSDITNSSILQIVRLKTKQNSKQVGIKIPENCVS
RVRAELSRMDEEVKKARRERDQRFQQEMFAKMNNARKLCANLPQSLANHLPYPPSRLPPA
APSKSESVSEVLDLTISPCPSPDIKPVGSDARISLNGISLNGGIAGGKGRHSVVAPETFD
LEELISQERQRQLAMNAGMRVSPSSRAARGFLRQQQHVHTLKQNHSSLGVLTQQQSSSHA
QRSVNGSARCSTLLSQLQGGQDKALMMRFLTQMQQRTGVSSQSTRTALQSPQQSQHASML
TRMSNAHSLSTHPQVMKQPPQAHASKNMQLPLSRSMLPQPLQLQLLHSQPAPDRVAIPNS
DFDFEDLDFSCPSPVSRLQYPFSSQTPSSTPPSSYSSSLFTSAPLNSSLSDSSSSSSHFT
PSSSEQSHLLLPNGHCSMDVLDVRETLDHMIRGTPSDQRQSVIQYKPVDWDAT
NT seq
4842 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcgtctgtctagaaggggttgccttacctggtttttggttttgtgtatgtggt
ctgcataaaccgcacactttctgttgggtctcacaggttgtgttaaattcaccagcatca
gctctaccaagtcagctctgtccgtcaaactcatgggcgttctcgcagcaaactcagtac
agccagcactatcctatgcaatctggaaggtcgttccagtcaaacccatcctctgggaat
ctggacctgtctgacatagactttcaggaccttgtgcggaacggagattttccccaggat
ctgtcatgtatagatgagctgtccaacacatcactgttctcttcgccctctgactctctt
tcggagtatacagagccttcagggtttggcaccgacagcctggcacagttacccagcgag
ggcacagcagcacagggctactgggttacacctggacacagtcagagacaacagagtgtt
tttcctactaaactggaagacattaatgcgattctgtctgcctcagtccctggattaagg
gcagctccacctccacaggaggaagaggaggaggccgatgatgaagagacagaagagtta
gggcacgccgacacgtatgcggaatacaagccatccaaatctactattggtatctctcat
cctgacatcgttgtggagacgaacacgctgtccagtgtccctcctcctgacattacatac
ccactgtccattcctgagagcaccataacctcaggcctgctgtcagcactgcagctggag
gccatcatctatgcctgtcagcaacacgaggtgatccttcagaacggtcagcgggcaggg
tttctgatcggagatggtgccggtgtcgggaaaggccgcactgtggccggaatcatactg
gagaatttcttaaagggacggaaaaaagcattatggtttagtgtctcgaatgatttgaag
tatgatgccgagagagatctcaaagacatcaacgctcctaacatccctgtttttgctttg
aataagattaaatatggtgatactgctacctcagagggcgttctcttcgccacatactct
gcgctgatcggagagagccaggccggcgggcagcaccgcaccagactcaaacagatccag
gaatggtgtaaacccaactttgatggagtcattgtgtttgacgaatgccacaaagctaaa
aatgcaaccgccaccaagatgggtaaagcagtacttgacctccagactaaactgcccctg
gcaagggtggtgtatgctagtgccacaggtgcttctgagccaaagaacatgatctacatg
agccggctgggcatctgggggctaggaaccccattcaaggcgtttgatgactttcttcac
gctatagagaagaggggtgttggtgccatggagattgttgccatggatatgaaagtgagc
ggcatgtatattgcacgacagctgagtttttctggtgtgtcgttccgtatagaggagata
acactggatgaggagttcaaactggtttacaacagagcagctagactgtgggctgaggct
ctggagtcgttcaccagggctgcggacattttgggtttggcgtcccggaagtctctttgg
ggtcagttctggtctgcacatcagaggttctttaaatacctctgcatcgctgctaaagtc
cgtcgtctggtggagcttgctcgtgtcgagatgcagcacggcaagtgtgtcgtgattggc
ctgcagtcaaccggagaggctcgtactcgagaggtgctggacgagaacgatgggcattta
gacagattcgtctctgctgctgagggtgttttccactcattagtccaaaaacactttcca
accgaaaaaagagagaaaagaaccaccggcaagaggaaacgaaagcccaagggccgggct
tcaaagtttccaaagcactgtgtggaggtggggggagttattaagatcagcgacgactcg
gactctgactcagatgaggttgacagcgaatcaaactcctccccagaatcactacaggat
aatgatgatgtgatttttgtcaaccacatcaatgggcctgcggccaaactattagaagac
aagcagaggctgctgggtaaaatagcagagttggggaaagatctgcctctaaacacactt
gatgagttgattgacaggtttggaggaccagagagggtgtctgagatgaccgggcgtaag
ggtcgtgtggtgcggcgacctgatggcagcgtgcgatacgagaccagagcagaacagggc
ctgaccatcgatcacgttaacatcagagaaaaagagagattcatgaccggagagaagttc
atagccattatctctgaggctgctagctcgggcatctctctgcaggcagataaacgcgtg
cagaaccgcaggagacgggttcacatgaccctagagctgccgtggagtgctgaccgggcc
attcagcagttcggtcgaacacatcgatcaaatcaggttactgctcccgactatatcttc
ctgatctcagagctggcgggtgagaggcgcttcgcttcaatcgttgccaagagattggag
agcctgggggcgctgacgcatggggaccgacgagccactgagtctagagacctgagtcag
tacaactttgagaataaatacggcaccaaagcgttggataagatcactaaagccatcctg
ggacacatcgacaacaaagtccctccacccaaagggtacccaggaggagatctcatgttc
ttcagagatatgaagaaaggcatgatcgatgttgggatcttctgtagggagcctcgactt
ggtctgaacacagaaaaagactgcaccattaccaagtttctgaaccggattctgggtttg
gaggtctatcagcagaactctttgtttcagtacttcactgataacttcgactacttgatc
gagaaagacaaaaaagagggcaaatatgacatgggaatattggatctggctcctggtaat
gatgagattcacgaggaaacacaggagaagtttctgaccccgggtaaccctcaggagggt
caggtcatcctctacaagatcagtgtggatcgtggaatgccctgggatgaagcctgcagt
aaagctgagaaatttacgggagattatgaaggcttttacctttcaaataagttgcgcggg
agccagccatgtgtgctgcttgctgaacagggtcgcgggcggaacctcattttatataaa
cccaacatcggtaaacaggcacatcctgagaatctagacaacctcctgctgcgatactac
aaggtgatgccagatgaagcaaaacattactgggagagtcagtttgtcttttccttcact
aaatgcagccatgccaactggaagggtacgtgtaagctgatcgaggagggacatgagtgt
ttgttggggatgcgtctcagacagtatcacatgttgtgcggcgctctgctcagggtttgg
aaacgcgtctctgacatcgtctctgacatcacgaactctagcatcctgcagatcgttcga
ctcaaaacaaaacagaacagcaaacaagtcggtataaaaatcccagagaactgcgtatct
cgggtgcgtgccgagctctctcgaatggacgaggaagtaaagaaggcacgcagagagcga
gaccagcgttttcaacaggagatgtttgccaaaatgaacaatgcccgcaaactgtgcgcc
aacctaccccagtcccttgcaaaccaccttccttacccaccatcccgcctgccccctgca
gcgccgtcaaagagcgagtctgtcagtgaggtcctggacctgaccatcagcccgtgccct
tccccagacatcaaacccgtcgggtcagacgcgaggatcagcctgaacggcatttccctg
aacggagggatagcgggcgggaaaggacgccattccgtggttgcaccggagacatttgac
ctggaagaactgatctcccaggaacggcagaggcagttggcgatgaacgcaggcatgcgt
gtctcgccgtcttctcgcgccgctcgtggtttcctgcgacagcagcagcatgttcacacg
ctaaagcagaatcattcgtcgctgggcgtgttgacgcagcagcagagcagctcacacgcc
cagcggagcgttaatgggtcggcacggtgcagcactcttttatcacagctgcaaggaggg
caggacaaagcgctcatgatgcggtttctcacgcagatgcagcagcgaaccggcgtatcg
tcgcagtctacacgcacggcgctgcagtcaccacagcagagtcaacacgcatccatgctg
acacgcatgtctaacgcacactcgctcagcactcacccgcaggtgatgaaacaaccgccg
caggcgcatgcgagcaaaaacatgcagcttcctctaagcagatccatgctgccgcaaccc
ctgcagttgcagctcctgcacagtcagcccgctccagatcgagtagcaatcccaaacagc
gattttgattttgaggatttggacttcagttgcccctcgcccgtttctcgactgcagtac
ccgtttagctctcaaaccccgtcctccacccctccttcctcttactcctcctccctcttc
acttcagctcctctgaactcctccctgtcagactcgagctcctcctcgtcacactttacg
ccatcctcttccgaacagtcgcacctcctgttacccaacggccactgcagtatggacgtc
ctggatgtgcgtgagacactggatcacatgatccgcggaaccccatcggaccaacgccag
tccgtcatccagtacaaacccgtggactgggacgccacctag
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