Triplophysa dalaica: 130417423
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Entry
130417423 CDS
T09616
Name
(RefSeq) uncharacterized protein LOC130417423
KO
K13126
polyadenylate-binding protein
Organism
tdw
Triplophysa dalaica
Pathway
tdw03015
mRNA surveillance pathway
tdw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130417423
09123 Folding, sorting and degradation
03018 RNA degradation
130417423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130417423
03041 Spliceosome [BR:
tdw03041
]
130417423
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130417423
mRNA cycle factors
Stress granule specific factors
130417423
Spliceosome [BR:
tdw03041
]
Complex C
Other components
Complex C specific factors
130417423
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Motif
Other DBs
NCBI-GeneID:
130417423
NCBI-ProteinID:
XP_056598964
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All DBs
Position
3:complement(21588529..21591497)
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AA seq
381 aa
AA seq
DB search
MTYMWSCAYHVKRRSLGNDRVADVLQNNKHSFDEPLDETERSSDLPLHFLTFIEQFISLI
HSLNNTFSSELLCVSCILSCFNISCELVIFTGQMTSFVGGSCRAAGVPRDQIASLFVGDL
HPEVSEFVLHQMFSPFGPIQSVRVCRDRLTRRSLRYGYVNFVNLANAESAMDNLMCQDLL
GRPMRIMFSQRDSTLRTTGVGNIFVKGLASSIDGARLHDSFSIFGKILSCKVVCDANGSK
GYGFVHFATFEAAEKAIKALDGMLLDDQLVSIGHFKTFEERRVEPQVVAQDNERRYPVEK
RPDAQPENQPALQDVSRQTAACALAQSESLRPPMPVDLWDDVNTRPPRLLVSQVLMEYWC
LRFPKLCLTVQELLSKRKLNR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgacgtatatgtggtcgtgtgcgtatcacgtgaaacgtcggtcactaggcaacgaccgc
gtagctgacgttctacaaaacaacaaacattcgtttgacgagccgctggatgagacggag
cgatcttcagacttgcctttacatttcttgacttttattgaacagttcatttcgttaatt
cattcgttgaacaatacattttcatctgaattactgtgtgtgtcctgtattttgtcttgt
tttaacatttcttgcgagttggttatttttacaggtcagatgacatcgttcgtcggagga
agctgtcgtgcggctggcgtaccgagggaccagatcgcctcgttgttcgtgggggacctt
catccagaagtgtccgagttcgtcctccatcagatgttcagcccgttcggtccgatccag
tccgtgcgggtctgcagagacaggttgactcggcgatccctgcggtatggttatgttaac
tttgttaacctcgccaatgccgagagtgccatggacaacctgatgtgccaggatcttctg
ggcagacccatgcggatcatgttctcccagcgtgattccacgctgcggacgactggggtc
gggaacatcttcgtcaagggtctggccagcagcatcgatggtgcccgccttcatgacagc
ttctcgatttttgggaagatcctgtcctgcaaggtggtctgcgatgcgaacggatccaaa
ggttacggattcgtccactttgccaccttcgaagcggcagagaaggccatcaaagcgctt
gatggcatgttgttggacgaccagctagtgtccattggccactttaagacctttgaagag
cgtcgcgttgagccgcaggtcgtggctcaggacaacgagcggcgctacccggtcgaaaaa
cgccctgacgctcaacctgaaaaccagccggcgcttcaggacgtcagtcgacagacagca
gcgtgcgccctcgctcagagtgagagtctccgcccacccatgcctgtcgacctgtgggat
gacgttaatactcggcccccgcgcctgctggtctctcaggtgctcatggaatactggtgt
ctcagattcccaaaactctgcctgacggtgcaagagctcctgtccaaacgcaagctcaac
aggtag
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