Triplophysa dalaica: 130417498
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Entry
130417498 CDS
T09616
Symbol
mib1
Name
(RefSeq) E3 ubiquitin-protein ligase mib1 isoform X1
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tdw04121
]
130417498 (mib1)
Enzymes [BR:
tdw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130417498 (mib1)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130417498 (mib1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank_5
Ank
SH3_15
MIB_HERC2
Ank_4
Ank_3
zf-C3HC4_3
ZZ
Ank_KRIT1
zf-C3HC4_2
Sina_RING
Prok-RING_4
zf-RING_5
Peptidase_M16
Motif
Other DBs
NCBI-GeneID:
130417498
NCBI-ProteinID:
XP_056599056
LinkDB
All DBs
Position
3:13761216..13808119
Genome browser
AA seq
1059 aa
AA seq
DB search
MTTGRNNRVMMEGVGARVIRGPDWKWGKQDGGEGHVGTVRSFESPEEVVVVWDNGTAANY
RCSGAYDVRILDSAPTGIKHDGTMCDTCRQQPIIGIRWKCAECTNYDLCTTCYHGDKHHL
RHRFYRITTPGSERVLLESRRKSKKITARGIFAGGRVVRGVDWQWEDQDGGNGRRGKVTE
IQDWSASSPHSAAYVLWDNGAKNLYRVGFEGMSDLKCVQDAKGGTFYRDHCPVLGEQNGN
RNPGGLQIGDLVNIDLDLEIVQSLQHGHGGWTDGMFETLTTTGTVCGIDEDHDIVVQYPS
GNRWTFNPAVLTKANVVRSGDVAAGAEGGTSQFMVGDLVQICYDIDRIKLLQRGHGEWAE
AMLPTLGKVGRVQQIYSDSDLKVEVCGTSWTYNPAAVTKVAPSGSAVTNGSGERLSQLLK
KLFETQESGDINEELVKAAANGDLAKVEDILKRSDVDVNGQCAGHTAMQAASQNGHVDVL
RLLLKHNVDLEAEDKDGDRAVHHASFGDEGSVIEVLHRGGADLNARNKRRQTPLHIAVNK
GHLQVVKTLLDFSCHPSLQDSEGDTPLHDAISKKRDDMLSVLLEAGADVTITNNNGFNAL
HHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVHQGSANLD
IQNVNQQTALHLAVERQHTQIVRLLVRAEAKLDVQDKDGDTPLHEALRHHTLSQLRQLQD
MQDVSKVEPWEPSKNTLIMGLGTQGAEKKSAASIACFLAANGADLTIRNKKGQSPLDLCP
DPSLCKALAKCHKEKTSGQVGSRSPSLSSNNETLEECMVCSDMKRDTLFGPCGHIATCSL
CSPRVKKCLICKEQVQSRTKIEECVVCSDKKAAVLFQPCGHMCACENCASLMKKCVQCRA
VVELRTPFVLCCGGKGMEDATDDEDLNYAIDQTELAPKPAAGVLALQNNVSGCFSAGSSN
SVAGGSQDLLQPNNLAISWSSGNIPGLQRDKDNTNVNADVQKLQQQLQDIKEQTMCPVCL
DRLKNMIFMCGHGTCQLCGDRMSECPICRKAIERRILLY
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccggtaggaataacagagtcatgatggaaggagtcggcgctcgagttatccgc
gggccagactggaagtggggtaaacaggacggaggagagggtcacgtcggcaccgtgagg
agttttgagagcccggaggaggtggttgtggtgtgggataacggcacggccgctaattac
cgctgctcaggagcgtatgatgtgaggatcttagacagtgcacccacaggaatcaagcat
gatggcaccatgtgtgacacctgtcggcagcagcccatcattgggatccgatggaaatgt
gcagagtgcaccaactatgacctctgcactacctgttaccatggtgacaagcaccacttg
cgccacaggttctaccgcatcaccactcctggcagtgagagagttcttctggaatctcgt
cgaaagtccaagaagatcacagcccgaggcatctttgcaggaggacgggtagttcgggga
gtggattggcagtgggaggatcaggatggtggaaatggcagaagagggaaggtgacagag
atccaggactggagtgcttccagcccccacagtgcagcctacgtcctctgggacaacggg
gccaagaacctttacagagtgggattcgagggcatgtccgatctgaaatgtgtgcaagat
gccaaaggaggcacgttttacagggaccactgtccagtattgggtgagcaaaatggcaac
aggaacccaggaggtctgcagattggagacttggtcaacattgatctggatctggagatt
gttcagtcactgcagcatgggcatggaggctggacagatggcatgtttgaaacgctcacc
accacaggcactgtttgtggcatcgatgaagatcatgacattgtcgtgcagtaccctagt
ggaaacaggtggacatttaacccggctgtactcaccaaggcaaacgtggtgcgcagtgga
gatgtggctgccggtgctgaggggggcacctctcagttcatggtgggagatctggtccag
atctgctatgacattgatcgtatcaaactgctccagagaggacatggagagtgggctgaa
gctatgctgccaacccttggaaaggtgggcagagtgcagcagatctactcggacagtgac
ctgaaagtcgaggtgtgtgggacatcctggacgtacaatccggctgctgtcactaaagtt
gcaccttctggctctgctgttaccaatggatctggagagcgcctttctcaactcctcaag
aagctctttgagactcaggagtctggagacatcaatgaagagttggtgaaggccgctgct
aatggtgacctggctaaagtggaggacattctgaagagatcagatgtagatgtgaacggg
cagtgtgcaggacacactgctatgcaggctgccagccagaatggccatgtggatgtcctc
agacttctgctgaaacataatgtagacctggaggctgaggataaagacggagacagagct
gtccatcacgcatcctttggggatgagggttccgtcattgaggtactgcatcgaggcggg
gctgacctgaatgccagaaacaagcgcagacagacgccccttcacattgctgtcaacaag
ggccacctacaggtggtgaagacgttgcttgactttagttgccaccccagtctgcaggac
tctgagggagacacacctctgcatgatgccatcagcaagaagagggatgacatgctctcc
gtactgctggaagctggtgcagatgtcacaatcaccaacaacaatggtttcaacgcgctt
caccatgctgctctgcgagggaaccccagtgccatgcgcgtgcttttgtccaaactgcca
cggccctggatagtggacgagaagaaagatgacggttacactgcacttcatctcgctgcc
ctcaacaaccacgtggaggtggcagagctcctagttcatcagggaagtgccaatctggac
atacagaatgttaaccagcagacagcattgcaccttgccgtcgaacgtcagcacacccag
atagtgcgactgttggtccgagctgaggctaagttggatgtgcaagacaaggacggcgac
acgccactgcacgaggccctgcgtcaccacactttgtcccaactgcgccaacttcaggac
atgcaagatgtcagcaaagtggaaccctgggagccctccaaaaacacattaatcatggga
ttgggcactcagggagctgaaaagaagagtgcggcttctattgcttgtttcctggcagcc
aacggtgctgacctcaccatccgcaacaagaaaggccagtctcctctggacctgtgccct
gaccccagcctctgcaaggccctggctaaatgccacaaagagaagaccagtgggcaggtg
ggttcccgtagcccgtctttgagcagtaataatgaaactctggaggaatgcatggtttgc
tcggatatgaagagagacacgctcttcggcccctgcggtcacatcgccacctgctctctc
tgctcgccccgtgtcaagaaatgtctcatttgcaaggaacaggtccagtccagaactaag
attgaggagtgtgtggtgtgctctgataagaaggcagctgttctctttcagccctgtggt
cacatgtgcgcctgtgagaactgtgcaagcctaatgaaaaagtgtgtgcagtgtcgggcc
gtggtggagctccgcactcccttcgttttgtgctgtggagggaaaggtatggaggatgcc
actgatgatgaggaccttaattatgccatagaccagactgaattggccccaaaaccagca
gcaggggtgcttgcattacaaaacaatgtgagtggttgcttctcagcagggagctctaac
tcagtggcaggggggtcacaggatcttctccagcccaacaatctggcaataagttggtcc
agcggaaatattccaggattgcaaagggacaaagacaacactaatgtcaatgcagatgtg
cagaaattgcagcagcaactgcaggatatcaaagagcagaccatgtgccctgtgtgtctg
gatcgcctaaagaatatgatcttcatgtgcggccatggcacttgtcagctgtgcggtgac
cgaatgagcgagtgtcccatctgccgcaaagctatcgagcgtcggatcctgctttattag
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