Triplophysa dalaica: 130417712
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Entry
130417712 CDS
T09616
Name
(RefSeq) LOW QUALITY PROTEIN: integrin beta-1-A-like
KO
K05719
integrin beta 1
Organism
tdw
Triplophysa dalaica
Pathway
tdw03271
Virion - Rotavirus
tdw04145
Phagosome
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
tdw04514
Cell adhesion molecules
tdw04530
Tight junction
tdw04810
Regulation of actin cytoskeleton
tdw04820
Cytoskeleton in muscle cells
tdw05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
130417712
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130417712
04514 Cell adhesion molecules
130417712
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130417712
09144 Cellular community - eukaryotes
04510 Focal adhesion
130417712
04530 Tight junction
130417712
09142 Cell motility
04820 Cytoskeleton in muscle cells
130417712
04810 Regulation of actin cytoskeleton
130417712
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
130417712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130417712
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130417712
04515 Cell adhesion molecules [BR:
tdw04515
]
130417712
04090 CD molecules [BR:
tdw04090
]
130417712
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
130417712
Exosome [BR:
tdw04147
]
Exosomal proteins
Proteins found in most exosomes
130417712
Cell adhesion molecules [BR:
tdw04515
]
Integrins
Integrin beta subunits
130417712
CD molecules [BR:
tdw04090
]
Proteins
130417712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_B_tail
Integrin_b_cyt
EGF_integrin
PSI_integrin
I-EGF_1
EGF_2
EGF_Teneurin
EGF_TEN
vWA_SIBA-E
Motif
Other DBs
NCBI-GeneID:
130417712
NCBI-ProteinID:
XP_056599408
LinkDB
All DBs
Position
3:19212233..19228636
Genome browser
AA seq
795 aa
AA seq
DB search
MDLRVFLLISLLLGLGSAQQDGNECTKASAQSCGECIQAGEKCGWCTDVNFLKQGEQKST
RCDEVESLLKKGCNKASIENPRGNVETLKNQSVTNRKKEGGSLKPDQITQIQPQKLRLML
RSGEAQKFALKFKRAEDYPIDLYYLMDLSFSMKDDLENVKNLGTHLMTEMQKITSDFRIG
FGSFVEKTVMPYISTTPAKLLNPCSADQNCTSPFSYKNVLSLTADGSKFNDLVSRQHISG
NLDSPEGGFDAIMQVAVCANQIGWRNVTRLLVFSTDAGFHFAGDGKLGGIVLPNDGKCHL
QDNMYTMSHYYDYPSIAHLVQKLSENNIQTIFAITKEFLPVYQQLKELIPKSAVGTLSSD
SSNVIKLIIDAYNSLSSEVILENSRLPEGVSISYVSHCKNGVSENGENGRKCSNISIGDE
VTFDVSITAKGCPSNGKSETIKIKPLGFTEEVEIILNFICECECHVEGIPNSQECHFGNG
TLECGACRCNEGRIGRVCECSKDEVRTEDLDANCRIDNGTDICSNNGDCVCGTCECKKRD
NPEERYSGKFCECDNFNCDRSNNKLCGGHGRCECRKCICDANYTGSACDCSLDTSTCIAS
NQQMCNGRGTCECGVCKCTDSVQGQKCEICPTCPGVCSEHKDCVECRAFSTGDKKDACEK
DCRDFSLNMVKKKEDLPQPNDKPFINHCKERDANDCWFFFTYATRNDSTVEVHVAEELEC
PSGPDIIPIVAGVVAGIVLIGLALLLIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIY
KSAVTTVVNPKYEGK
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagagtgttcctcctgatatcacttctgctcggactcggcagcgctcaacaa
gatggtaatgaatgcacgaaggcttcggctcagtcctgcggagaatgcattcaggccgga
gagaagtgtggatggtgtacagacgtgaactttctaaaacagggagagcagaagtccaca
cgctgcgatgaggtggagtctctgctcaaaaagggctgtaataaagctagcattgaaaat
ccacgtggaaatgttgagaccctcaagaaccaaagtgtaacaaatcgcaaaaaagaagga
ggatctctgaagccagatcagatcacccagattcaacctcaaaaactccgcctcatgctc
cgctcaggtgaagctcagaagtttgcactaaaattcaagagagccgaggattatcctatt
gatctctactacctgatggacctcagtttctctatgaaagatgatttagaaaatgtgaaa
aacttgggaacacatcttatgactgaaatgcaaaagatcacctctgacttcaggattggt
tttggctcctttgtggagaaaaccgttatgccatacatcagcacaacaccagccaagctg
ctaaacccctgctcagctgatcaaaactgtaccagcccgttcagctataaaaacgtgctg
agcctaaccgcagatggatccaagtttaatgaccttgttagcagacagcacatctcagga
aacctggactcacccgagggagggtttgacgccatcatgcaagtggcggtctgcgcaaat
cagatcggctggcggaacgtcacacgtctgcttgtgttttccaccgatgctggattccac
tttgctggagatgggaaactgggtggaattgtacttcccaatgatggaaaatgccatctg
caggataacatgtacactatgagccattattacgactatccatccattgctcatctggtt
cagaaattaagtgaaaacaacattcagaccatttttgcaattacaaaggagttcctgcct
gtttaccagcaactgaaagaactcattccaaagtctgcggtgggaacgctgtcttcagac
tccagcaatgtgataaaactcatcatcgatgcctataattctctttcctctgaggtaatt
ctggagaacagcaggctacctgaaggcgtgtccatctcatatgtttctcactgcaagaat
ggggtgagcgaaaacggagaaaatgggagaaagtgctccaacatctctattggggatgag
gtgacatttgatgtatcgatcacagctaagggttgtccatccaatggtaaatctgagaca
ataaagatcaaaccgctaggcttcacagaggaggtggagatcatcctcaacttcatctgt
gaatgcgagtgtcacgtcgaaggcattccaaacagccaagagtgtcattttggcaatgga
actttggagtgtggagcatgcaggtgcaatgagggacgcattggcagggtttgtgaatgt
agcaaagacgaagtgagaactgaagatttagacgcaaactgccgcattgataacgggacg
gacatctgcagcaataatggagactgtgtttgtgggacgtgcgagtgcaaaaaaagagat
aatccagaagagagatacagcggcaagttctgtgagtgtgacaacttcaactgcgaccgc
tccaacaacaagctctgtggaggtcacggtaggtgcgagtgtcggaaatgtatatgtgat
gctaactacacaggcagcgcttgtgactgctctctggacacctcaacctgtatagccagt
aaccaacaaatgtgtaacggtcgaggcacctgtgagtgtggtgtgtgtaaatgtaccgac
tccgttcagggtcagaaatgtgaaatctgcccgacctgccctggagtttgtagcgaacac
aaggactgtgtcgagtgcagagcatttagcaccggtgacaagaaagatgcatgtgagaaa
gattgtagagacttcagtcttaatatggtgaagaagaaggaagatcttccacagcctaat
gataagcccttcatcaatcactgtaaagagcgagatgctaatgactgctggttcttcttc
acgtacgctaccagaaacgacagcactgttgaggtccatgtggcagaggagcttgagtgc
ccgtctggtcctgacatcatccccattgtagctggtgtggtcgcaggaatcgttctgatt
ggtttagctctgctgctcatctggaagctgctcatgattattcacgaccgcagagaattc
gccaaattcgagaaagagaagatgaatgccaagtgggacacgggtgagaaccccatttac
aagagcgctgtgactacggtggtgaaccccaaatatgagggcaagtaa
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