Triplophysa dalaica: 130417890
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Entry
130417890 CDS
T09616
Symbol
myom1b
Name
(RefSeq) LOW QUALITY PROTEIN: M-protein, striated muscle
KO
K24495
myomesin
Organism
tdw
Triplophysa dalaica
Pathway
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130417890 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tdw04990
]
130417890 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
tdw04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
130417890 (myom1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_DSCAM-DSCAML_C
Ig_2
ig
V-set
Pur_ac_phosph_N
Tissue_fac
C2-set_3
Ig_J_second
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
130417890
NCBI-ProteinID:
XP_056599717
LinkDB
All DBs
Position
1:2983272..3017408
Genome browser
AA seq
1649 aa
AA seq
DB search
MSGSIPFYQKHHRHYDRGYRRRETESAISQYQQSSSSYSSRSSKSTQGIRAATYTALDEG
GIRPLPTRAKPTYLAMDKENQIIGYVVPIFRGSREFESGLSDTEEARAKESAGYLARRDL
FTSGVELERTEHKSRRTVMRESAERISLSKRIHENEEYHKRLNEDSLMHTPEFVIKPRSH
TVWEKQCVRLHCTITGWPEPRVVWYKNNVSIDPMAHPGKYKLESSYNVHSLEINRCDFDD
TAQYRVSAMNSKGENAAYASVVVKRFKGEMDEYLPTPKQLPCLEYGVTFETHIVEKFGVA
FGREGETLSFGCNVIIYPSLQRFQPEIEWYRDDKLLVPSKWMQMHWSGDRATLTLTHLNK
EDEGLYTLRVITKSGFETHSAYVFVRDCDGEVEGAPGAPLDVQCQEANKDYIIVTWKQPA
VDGGSHILGYFVDRCEVGTTHWAQCNDTPVKFARFPVTGLVEGRSYSFRVRAVNKAGMSH
PSRVSEPVAAMDPADRARKGTSAPWTGQIIVTEEEPVEGVVPGRPCDLSVIEATKNYVVL
SWKPPGEKGHEGVMYYVEKCVSGTDTWQRVNTEIPVKSPRFALFDLAEGKSYCFRVRCCN
SAGVGEPSEPTEATTVGDKLDIPSAPGRVVPTRNTDTSVVVSWEASRDAKELVGYYIESS
VAGSNAWEPCNNKPVKCTRFICHGLTTGETYVFRVRAVNAAGISDFSQESESIEVKAAIG
GGIPHASPAPPYGITVLESVRDSMVLAWKQPTFIGGADITGYFIDYREVIGGVPGKWHEA
NIKSISERAYRVSDLKENMLYQFQLRAANMAGVGIPSQPSDVFRCEEWTIAVPGPPHDLQ
IQEVRKDALVLLWKPPVYQGRDAVNGYYVDIKEADADFEMWRGFNEKATDKRHMKIKDLK
EGESYVFRVRAQNKAGVGKASETTEPVKAVTKPGTSEIVVEVDDDGVISLNFQCSELTPD
SKFIWSKNYEEMSDSDRMTMDTKGNKSKATFKTPSEEDLGIYSCVVTHTDGVSASYTITE
EGLKDLLKISHEHKFPIIPLKSELAVELLEKGRVRFWLHAEKMSANGKVEYVFNDNMISQ
GEKYKMNFDKNTGIIEMFMETLSKDDEGTFTFQLQDGKATNQSSLVLIGDVFKQLQKESE
FQRKEWHRKQGPHFVEYLSYEVTPECCVRLKCKVGNMKKDSXALWYKDGREIKVSEKLDF
SEGVLTLEIAQISKKDAGVYEVVVKDDRGKDTSTLNLTDHGFKDLMNEVFSVIANSSTPL
KIQSTEEGIRLYSFVSYYNDELHVTWHHKDAAIAFTDRIKSGVVGEQLWLQISEPTEKDK
GKYAIEFFDGKGGLRRTVELAGQAFDDAFAEFQRLKSAAIAERNRARVAGGLPDVVTIQE
GKALNLTCNISGDPVPEVTWLKNEREMVSDDHYILKFESGKFASFTITGVNTSDSGKYSI
LVKNKYGTESGDFTLKATENMGDYGVISYLADADGNVTVGPATPLSTSRSAKPPSRSTPA
PVIQAPTTSAPETPILPTSAAVTPATPTPAPVTPVTPTPALATPSPPSPALATPSTPALV
TPSPPTPALATPPTSALASPSPPTPASVTPAPTPSTPTPGEDLNKKAVTENTSSLRKDSE
TVGDLADSVPAHEASSAAEPEESTAAPVQ
NT seq
4950 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggatcaataccgttttaccagaaacatcatcgccactatgatcgtggctaccgt
agacgggagactgagtctgctattagccaataccagcagagctccagcagttattcctca
cgtagcagcaaaagcacacagggcattagagctgccacatatacggcactagatgagggg
ggcatcagacccctgcccacgagagccaagcccacctatctggccatggacaaggagaac
cagatcatcggttatgtggtgcccatcttcaggggcagtcgtgagtttgaaagtggtctg
tcagacacagaggaagcacgcgctaaagagagcgccggatatctggcacgccgtgacctc
ttcactagcggcgtggagttggagcgcacagaacacaagtcccgccgaaccgtcatgaga
gagtccgctgagcgcatctcgcttagcaaaaggattcatgagaacgaagagtatcacaag
cgtctgaacgaggacagcctgatgcacacaccagagtttgtgatcaagccccgttcacac
actgtgtgggagaaacagtgtgtgcggctgcactgcaccatcacgggatggcctgaacca
cgcgtggtgtggtacaagaacaatgtctccattgaccccatggcccacccagggaagtac
aaactggagagcagctataatgttcactccctggagattaacaggtgtgattttgatgac
actgcacagtaccgcgtgtccgcaatgaacagcaagggcgagaacgccgcgtacgcttct
gtcgtcgtcaaaagattcaaaggagagatggatgagtatctgcctactccaaaacagctg
ccctgtctggagtacggtgtgacttttgaaacgcacatcgtggagaagtttggagtggcg
ttcggccgtgaaggagagactctgagtttcggctgcaacgtcatcatctatccatcactg
cagcgctttcagccggagatcgagtggtacagagatgataaactgctggtgccgtctaaa
tggatgcagatgcactggagcggagacagagctacactcacgctcacacacctcaacaaa
gaggacgaggggctgtacacactccgcgtcatcaccaaatctggatttgagactcactcc
gcctatgtgtttgttagagattgtgatggtgaggttgaaggtgcacccggagctccttta
gatgtacagtgtcaggaggccaataaggattacatcatcgttacctggaaacagccagcg
gtggatggcgggagtcacatcttgggctactttgttgacagatgtgaggttggcactaca
cattgggctcaatgtaatgacactccagtgaagtttgctcgtttccccgtcaccggtctg
gtggagggacgcagctactcgtttcgtgtgcgtgcggtgaataaggccggtatgagtcac
ccgtcccgtgtgtctgaacccgtagctgctatggaccctgctgatcgcgcacgaaaaggt
acatctgctccctggactggccagatcattgtaactgaagaagaacctgtagagggagtc
gttcccggccgaccttgtgacctcagtgtcattgaagccactaaaaactatgtggtactg
agctggaagcccccaggtgagaagggtcatgaaggggtcatgtattatgttgaaaagtgc
gtttctggcacagacacctggcagcgagtaaacactgaaatcccggtgaaatctccacgc
ttcgctctcttcgatctggcggagggcaaatcgtattgcttccgtgttcgctgctgtaac
tcggctggtgtcggagaaccatcagaaccgactgaagccaccacggttggcgacaaactg
gatatcccgtcagcccctggtcgtgtggtgccgacccgcaacacggacacgtcagtggtg
gtttcgtgggaggcgtcgcgtgatgctaaagagctggtgggctactacatcgagtcaagc
gtcgctgggagcaatgcctgggaaccatgcaacaacaaacctgtgaaatgcaccaggttt
atctgtcatggcctgaccacgggcgagacatacgtcttccgtgtgcgagcggtgaatgct
gcaggaatcagtgatttctcacaagaatctgaatctatcgaagttaaagctgctattggg
ggcggtattcctcacgcatcccctgctcctccctatggcatcactgtgttggaaagtgtg
cgggactcgatggtgttggcatggaaacagcccactttcattggtggcgctgacatcacc
ggctacttcattgattaccgtgaggtcataggtggagtgccgggaaaatggcacgaggcg
aacatcaagtccatcagcgagcgagcatatagagtgtcggacctgaaggagaacatgctg
taccagttccagttacgcgcagccaatatggctggtgtggggatcccatctcagcccagt
gatgtattcagatgtgaggagtggaccattgctgttcctggacctccccatgacctccaa
atacaggaggttcgaaaggacgctctggtgttgctatggaaaccacccgtgtaccagggc
cgtgatgctgtaaatggatactacgttgatattaaggaggctgatgcagactttgagatg
tggaggggttttaatgagaaagccactgataagaggcacatgaagatcaaggatctaaag
gagggcgagtcgtatgtgttccgcgtgcgagctcagaacaaggctggtgtaggaaaagcc
tcagaaaccacagaaccggtcaaggccgtgactaaaccaggcacttcggagatcgtggtg
gaagttgatgacgatggcgtcatttctctgaacttccagtgttcagaactcactcctgac
tccaaattcatctggtccaagaattatgaggagatgtcagattctgaccgcatgaccatg
gacaccaagggcaacaagtctaaagcaacctttaagacgccttcagaagaggatcttggg
atttactcttgtgtggtcacacacactgatggagtgtcagccagctacacaatcactgaa
gaaggtctaaaggatctcttgaaaatcagtcacgagcacaagttccctattattcctctg
aagagcgagctggccgtggagttgctggagaagggaagagttcgcttctggctccatgcg
gagaagatgtctgccaacggaaaagttgaatacgtgttcaatgacaatatgatttcccag
ggagagaaatacaagatgaactttgataaaaacacaggcattattgaaatgttcatggag
actctgagcaaagacgacgagggaacgttcactttccaacttcaggacggcaaagccact
aatcagtccagtctggtgttgatcggagacgtcttcaagcagttacagaaggaatcagag
ttccagaggaaggaatggcacaggaaacagggtccacactttgtggagtatctcagttat
gaagtaacacctgaatgctgtgttagactgaagtgcaaggtcggtaacatgaagaaagac
tcgntggctctctggtataaagacggacgtgagattaaagtcagtgagaaactggatttc
tctgaaggagtgttgactctggagattgcacagatctcaaagaaagatgccggtgtttat
gaagtggttgtgaaggacgacagaggcaaagacacatcaaccctcaatctcactgaccat
ggatttaaagatttgatgaatgaggtcttcagtgttattgccaactcgtccactccactg
aagattcagagcactgaggagggaatcagactttacagctttgtcagctattacaacgat
gagctgcacgtcacctggcatcacaaggacgcagcgatcgcattcacagatcgcattaag
agcggtgtggtgggcgagcagctctggcttcagatttctgaacccactgagaaagacaaa
gggaagtatgccatcgagttcttcgacggtaaaggaggtctgcgcaggaccgtggaactg
gcaggacaggcattcgatgatgcgtttgctgaatttcagagactcaagtctgcagccatc
gcagagagaaatcgcgctcgcgtggctggtggactgcctgacgtcgtgactatccaggaa
ggaaaggctttgaatctgacctgcaacatctcaggagatccagtgcccgaggtcacctgg
ctgaagaacgagcgcgagatggtttctgacgatcattacatcctcaaattcgagtctggc
aagtttgccagtttcaccatcaccggcgtcaacacgtccgactccggcaaatacagcatc
ctggtgaagaacaagtacggtaccgagagcggcgattttactttaaaagcgacggagaac
atgggagattatggggtcatttcatacctggctgatgctgatggaaatgtgactgttgga
cctgcaacacctttatccaccagtcgttcagcgaaacccccatccagatcaacacctgcc
ccagttatacaagcaccaacaacatccgccccagagacacctattctaccaacatctgcc
gcagttaccccagcaaccccaacaccagctcctgttacccctgttacaccaacacccgcc
ctagcaacgccatcaccaccatcacccgctctagcgaccccatcaacacccgccctagtg
accccatcaccaccaacacccgccctagcgacaccaccgacatctgccctagcatcccca
tcaccaccaacacccgcctcggttaccccagcgcccacaccatccactcccacaccaggc
gaggatctcaataaaaaggcagttactgaaaacacatcatcactgcgtaaagactcggaa
actgttggagatctcgcagactccgttcctgcacacgaggcctcgtctgcggccgaacct
gaggagtccacagccgctcctgtacaataa
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