Triplophysa dalaica: 130417932
Help
Entry
130417932 CDS
T09616
Symbol
shhb
Name
(RefSeq) tiggy-winkle hedgehog protein
KO
K11988
sonic hedgehog
Organism
tdw
Triplophysa dalaica
Pathway
tdw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130417932 (shhb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tdw01002
]
130417932 (shhb)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
tdw00536
]
130417932 (shhb)
Peptidases and inhibitors [BR:
tdw01002
]
Cysteine peptidases
Family C46: hedgehog family
130417932 (shhb)
Glycosaminoglycan binding proteins [BR:
tdw00536
]
Heparan sulfate / Heparin
Morphogens
130417932 (shhb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Hom_end_hint
Peptidase_M15_3
YajC
HtaA
Vint
Ribosomal_S6e
Motif
Other DBs
NCBI-GeneID:
130417932
NCBI-ProteinID:
XP_056599781
LinkDB
All DBs
Position
3:7413689..7416931
Genome browser
AA seq
416 aa
AA seq
DB search
MDVRLHLKQIAFLSFICIFLTPCGLACGPGRGYGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGKYEGKITRNSERFKELIPNYNPDIIFKDEENTNADRLMTQRCKDKLNSLAISVMNQW
PGVKLRVTEGWDEDGHHFDESLHYEGRAVDITTSDRDKSKYGMLSRLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSGTVTLADGRRKHIEDLQVGDRVMAADDTGNISFSD
FIMFMDHDPHTRRQFLVIETSNPSIKLALTAAHLVFVVNGSPVSGMIAKFASNVKRGDKV
LVSDGTHGTFKSVTVKRIYTEEYQGSYAPVTAHGTIIVDQVLVSCYAVIENHRWAHWAFA
PVRLGHSLMTWLFPTRASNVTLQEDGIHWYSNALVYIGSWLLDRDSFHPLGISHLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatgtaaggctgcatctgaagcaaattgcttttctgtcttttatctgcattttcctg
acgccttgtggattagcctgtggtcctggtagaggttatggaaaacgaagacacccaaag
aaattaacgccgttggcttacaagcaattcattcccaacgttgccgagaaaacccttggg
gccagcggcaaatacgaaggcaaaattacaaggaattctgagagatttaaggaattgatt
cccaactataatcctgacatcatcttcaaagacgaggaaaacacaaatgctgacagactg
atgacacagcgttgtaaggacaagctgaattctttggcgatatccgtcatgaaccagtgg
cccggtgtgaaattgcgcgtcacggagggctgggatgaggacggtcaccatttcgatgaa
tctttgcactacgagggacgggcggtggacataactacctcagacagggataagagcaag
tatgggatgctgtcaaggcttgcggtggaggctggatttgactgggtctattacgagtcc
aaagcccacatacattgctctgtcaaagcagaaaattcagtcgctgctaaatcaggggga
tgctttcctggatctggcacggtgacactcgccgatgggaggaggaaacatatcgaagat
ctccaagttggcgaccgggttatggctgcggacgatacgggaaatatctcattcagcgac
tttataatgttcatggaccacgacccgcataccagaaggcaattccttgtcatcgagacg
tcaaatccctctataaagctcgcccttacagcagcgcacctggtcttcgttgtaaacggt
tcgcctgtttcaggtatgatagcgaaatttgccagcaacgtgaagcgtggagacaaagtt
ctagtttctgatggcacgcacgggactttcaagagcgtcacagtgaagaggatttacact
gaagagtaccagggctcttacgcgcccgtcaccgcgcacggaaccattattgtggatcag
gtgctggtgtcttgctacgcggttattgaaaatcacagatgggcgcattgggcttttgca
ccggtccgattaggtcacagcttgatgacgtggcttttcccgactcgtgcttcaaacgtc
accttgcaggaggacggcatccactggtactcaaacgcgctcgtttacatcggctcttgg
ctgctggacagagactccttccatccccttgggatttcacacttgagctga
DBGET
integrated database retrieval system
