Triplophysa dalaica: 130417974 Help Entry 130417974         CDS       T09616                                  Symbol copa Name (RefSeq) coatomer subunit alpha   KO K05236   coatomer subunit alpha Organism tdw  Triplophysa dalaica Brite KEGG Orthology (KO) [BR:tdw00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:tdw04131]     130417974 (copa)   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:tdw04147]     130417974 (copa) Membrane trafficking [BR:tdw04131]  Endoplasmic reticulum (ER) - Golgi transport   Retrieval pathways    Coat protein complex I (COP-I)     130417974 (copa) Exosome [BR:tdw04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    130417974 (copa)   Exosomal proteins of bladder cancer cells    130417974 (copa) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd WD40_CDC20-Fz WDR55 Beta-prop_EML_2 TPR_COPA_B Beta-prop_WDR36-Utp21_1st EIF3I WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st ANAPC4_WD40 WD40_RFWD3 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_SPT8 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_RIG_2nd Motif Other DBs NCBI-GeneID:  130417974 NCBI-ProteinID:  XP_056599838 LinkDB All DBs Position 3:3307354..3319072 Genome browser AA seq 1224 aa AA seqDB search MLTKFETKSARVKGLSFHPKRPWILASLHNGVIQLWDYRMCTLIDKFDEHDGPVRGIDFH KQQPLFVSGGDDYKIKVWNYKLRRCLFTLLGHLDYIRTTFFHHDYPWILSASDDQTIRIW NWQSRTCVCVLTGHNHYVMCAQFHPSEDLVVSASLDQTVRVWDISGLRKKNLSPGAVDTE VRGISGVDLFGVSDAVVKHVLEGHDRGVNWAAFHPSMPLIVSGADDRQVKIWRMNESKAW ELDTCRGHYNNVSCAVFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRRDHDRFWVLGAH PNLNLFAAGHDSGMLVFKLERERPAYAVYGNMLYYVKDRFLRQLDFNSSKDTAVMQLRSG SKFPVFSMSYNPAENAVLLCTRATNLENSTYDLYSIPRESDSQNPDAPEGKRSSGLTAVW VARNRFAVLDRMHSLLIKNLKNEIVKKVQVPSCEEIFYAGTGSLLLRDADGVTLFDVQQK RSLATVKIAKVKYVVWSADANHVALLAKHVIMICNKKLESLCNIHENIRVKSGAWAENEV FIYTTSNHIKYALTSGDHGIIRTLDLPIYVTRVRGNSVYCLDRECRPRVLNIDPTEYRFK LALVNRKYEEVLHMVRNAKLVGQSIIAYLQKKGYPEVALHFVKDEKTRFSLALECGNIEV ALEAAKALDERSCWERLGEAALLQGHHQVVEMCYQRTKNFDKLTFLYLITGNLSKLRKMM KIAEIRKDMSGHYQGALYLGDVSERVRILKNCGQKSLAYLTAATHGMDEEAEALKETFDL EKEVVPEVDPNAQLLQPPPPINPLDTNWPLLTVSKGFFEGAIAAKGKAGQMVADQDMDTA GAEGWGEDAELHLDEDGFMDAQEGLGDEGAIGKEEGEGWDVEEDLDLPPELDVPAGGGGG AEGEGFFVPPTKGTSPTQTWCNNSQLAVDHILAGSFETAMRLLHDQVGVVQFGPYKQIFM QTLSRGHTCYLGLPSLPCLHSYPQRNWKDSGAKGGLPAVGLRLSDLISRLQQCYQLTTAG RFEEAVERFRVILLSVPLLVVDNKQEIAEAQQLITICKEYIIGLTMETERKKLPKDSLDQ QKRLCEMAAYFTHCSLQPIHMVLVLRTALNLFFKLRNFKTAAGFARRLLELGPKPEVAQQ TRKILAACEKNLTDAQQLNYDPHNPFDICAASFVPLYRGRPVEKCPLSGACYCPKYKGEV CRVTQATEIGKDVIGLRVSPLQFR NT seq 3675 nt NT seq  +upstreamnt  +downstreamnt atgctgaccaaatttgagacaaagtcggcccgagtgaaagggctgagttttcatcccaag cggccctggattctcgccagtctgcacaatggtgtcatccagctttgggactatcgcatg tgtaccctgattgacaagtttgacgagcatgatggtccagtcagaggtattgacttccat aagcagcagccgctgtttgtgtcgggaggtgatgactacaagatcaaggtctggaactat aaactgcgtcggtgtcttttcactcttttgggacatcttgactacattcgcaccaccttc ttccaccacgactatccctggatcctgagcgcctcggatgatcagaccatccgcatttgg aactggcagtccagaacgtgtgtctgtgtgctgactggtcataatcactatgtgatgtgt gctcagttccatccctctgaagacttggtggtgtcggccagcctggatcagacagtgcgc gtgtgggatatttccggtctgaggaagaagaatctgtcccccggggctgtggacacagag gtgcgtggcatctctggtgtcgacctgtttggggtctctgatgctgtagtgaagcacgtt ctagagggtcatgatcgaggggtaaactgggcagctttccatcccagcatgcctctcatt gtatcaggagcagatgaccggcaggtgaagatctggagaatgaacgagtcaaaagcatgg gagttggacacctgtagggggcactacaacaatgtgtcctgtgcagtgtttcaccctcgc caggagctcatcctgtccaactctgaggacaagagcatccgcgtgtgggacatgtccaag aggacaggcgtccagacttttcgtagagaccacgaccgtttctgggtgctgggagctcac cccaacctcaacctgtttgctgctggtcatgacagcgggatgctggtgtttaagctggag agagagcgtccggcctacgctgtgtacggtaacatgctgtactatgtgaaagaccgattc ctgcgtcagctcgatttcaacagtagtaaggatacagctgtcatgcagctgcgcagcgga tcaaaattcccggtgttcagtatgtcctataatcctgcggaaaacgccgtgttgttgtgc accagagccactaacctggaaaacagcacatatgacctgtactccatccccagggagagt gactcgcagaatcctgatgcacctgagggtaaacgctcctcgggcctgactgcggtgtgg gtggccaggaaccggtttgccgtgctcgatcgcatgcattcactgctgataaagaatctg aagaatgagattgtgaagaaggtgcaggtgccgagctgtgaggagatcttctatgctggg acggggtctctgttactgcgggacgctgatggagtcacgctgtttgacgtgcagcagaaa cgctccctcgccacggtcaaaatcgccaaagtgaaatatgtggtgtggagcgctgatgcc aaccacgtggccctgctggccaaacacgtcatcatgatctgcaacaaaaaattagagagc ctgtgcaacatccatgagaacatcagagtgaagagcggtgcctgggctgagaatgaggtc ttcatctacaccacctccaaccacatcaaatacgctctcacctcaggtgatcacggtata attcgtacactcgacctgcccatctatgtgacgagagttcgaggcaacagtgtgtactgc ctggatcgcgagtgcaggccacgagtgctcaacatcgacccaaccgagtaccgtttcaaa ctggctctggtcaatcgtaaatacgaggaggttcttcatatggtgcgtaatgctaaactg gttggccagtctatcattgcatacctgcagaagaagggctacccagaggtcgcgcttcac ttcgtgaaggacgagaagactcgcttcagcctggcactggagtgtggaaacatcgaggtg gcgctggaagctgcaaaagctctagatgaacgtagttgctgggagcgtctcggcgaggcg gctcttctccagggtcatcaccaggtggtggagatgtgctaccagagaaccaagaacttt gacaagctcaccttcctgtacctcatcactggaaacctgtccaaactcaggaagatgatg aagatagccgagataagaaaagacatgagtggacactatcagggcgctctttacctgggt gacgtcagcgagcgtgtgcgaatcctgaagaactgcggacagaagtctctggcgtacctg actgcggccactcatgggatggatgaagaagccgaagccctcaaagaaacctttgacctg gaaaaggaggtggtgcccgaggtcgaccccaatgctcagttgctgcagccacctcctccc atcaaccctctggacaccaactggcctttgctcaccgtttctaagggcttctttgaggga gccattgctgccaaaggaaaagcaggacagatggttgccgatcaggatatggatactgct ggagctgaaggctggggagaagatgcagagcttcatctggatgaagatggatttatggat gctcaggagggattaggtgacgagggggctatcggtaaggaggaaggtgaaggctgggat gttgaggaagatctggacctccctcctgaactggatgtacctgctggtggtggaggcgga gctgagggagaaggattctttgtaccgcccaccaagggcacaagtcccacccagacatgg tgcaacaactctcaactggctgtggatcatattctagccggatccttcgagacggctatg aggttgctgcacgatcaagttggcgtggttcagtttggaccctataagcagattttcatg cagaccctgtcccgtggtcacacgtgttacctgggcctgccgtctctgccctgcttgcac agttacccccagaggaactggaaggacagcggggctaaaggaggcctgccagcggtcggc ctgcgtctgtctgacctcatttcgcgtctgcagcagtgctaccagctgaccacggcggga cgcttcgaggaagccgtggaacgcttcagggtcatcctgctctcggttcctctgctcgtg gtcgacaacaaacaagagattgcagaggcacagcagctcataaccatctgtaaagagtac atcatcggcctcactatggagaccgagaggaagaagcttcctaaagactctctagatcag cagaagcggctctgtgagatggcggcatacttcacacactgcagtctgcagcccatccat atggtgttggtgttgaggacggctctcaatcttttcttcaaactccgtaacttcaaaacg gcagcgggattcgctcgacgtctcctcgagctcggccccaaaccagaggtggcacaacag acacgaaagattcttgcagcatgtgagaagaacctgacagacgctcaacaacttaactac gacccacacaatccctttgacatctgcgcagcctcgtttgttcccttgtaccgtgggcgg cccgtagagaagtgccccctgtctggagcctgctactgccccaaatacaaaggagaggtg tgcagggttacacaggcaaccgagatcggtaaagatgtcattgggttgcgcgtcagcccg ctgcagttccgctga

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