Triplophysa dalaica: 130417989
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Entry
130417989 CDS
T09616
Symbol
nfatc4
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear factor of activated T-cells, cytoplasmic 4
KO
K17334
nuclear factor of activated T-cells, cytoplasmic 4
Organism
tdw
Triplophysa dalaica
Pathway
tdw04020
Calcium signaling pathway
tdw04148
Efferocytosis
tdw04218
Cellular senescence
tdw04310
Wnt signaling pathway
tdw04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
130417989 (nfatc4)
04020 Calcium signaling pathway
130417989 (nfatc4)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130417989 (nfatc4)
09143 Cell growth and death
04218 Cellular senescence
130417989 (nfatc4)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
130417989 (nfatc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130417989 (nfatc4)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
130417989 (nfatc4)
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Gene cluster
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
TIG
Motif
Other DBs
NCBI-GeneID:
130417989
NCBI-ProteinID:
XP_056599867
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Position
3:2460753..2471964
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AA seq
873 aa
AA seq
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MGAAPGSGWEEGEFEFKLVFEEDPPRQSHCGPEESAESGQTRHDPAGTSDTNSTYTPAGQ
PVGIPLPSPSGGHRAGMHSPPPRRALVREIIGTYESLPARSIQVSESRVLECPSIQITTI
SPEDDSGPPGGSYWDSGCGXDRERLYLPLLDSYRDVMTGAGSLSPSPSPASSSSSRGWLS
PASSCDSLLVEEEELNEATAHFCLSPSSRPTSPGGKKRRNSPLASPSTSRRSSYSEDHPS
LTDSGETSAQSHTPASCELNIPQKTRKTSLEQVSSRELEPESTPVQNPPCPVPEVSQMRR
EPPSLGMDYLSVPPALGWGRTRASAHSPIFRSNALPPLDWPLPSQFDQYELRIEVQPRPH
HRAHYETEGSRGAVKATPGGHPVVKLTGYTERQPLSLQVFVGTADDRSIRPHPFYQIHRV
TGKMVGTASQESIQAGTKLLDIPLNPENNMTALIDCAGILKLRNSDIELRKGETDVGRKN
TRVRLVFRAHLPLSPPIVPAGRVLALQVASLPIECSQRSAQELPVVESVSLTSCSAEGGE
ELILAGTNFLANSRVFFMERGSDGKVQWEEEAHVDRDKSDESLLCVRVPAYSDVSLSHPA
SVCLYVSNGKRKRSSTHCFKYLPIMFREEDPLMSRPSHLPLEGVTLCPVGNSGSDRHMRP
DVSIDDRNMSFHLPPYPSDYSYSHAYREEYCHKPEVPEDSGGRGALTERHPSFESLELGF
TELLPPMYPRVPQPLSPSPSHSPWLDSPYLSSSPSPSHSCSLSPYPASSPISGSPLPPLS
HSLYPQCSQEMCSSPPSNTSHYQELCPPPYSQYEGWEQQMRTSCERDGLKLDGPPDFTGP
SPMQHITLEEVNEFIGEDIQSFQMGPHMDSRPG
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggggccgcgccgggctcgggatgggaggagggagagttcgagtttaaacttgtgttc
gaggaggacccgccgcgacagagccactgcggcccggaggagagcgcggagagcggccag
acgcgtcatgatccagccggtaccagcgataccaactcgacttacacacctgctggtcag
ccagtgggcatccctcttccctctccatcaggcgggcaccgggctgggatgcattctccg
ccccccagacgtgcattagtcagagagatcattggcacttatgagagtctgccagctaga
tcaatacaggtgtcagagtccagagtcctggagtgccccagcatccagatcaccaccatc
tcccccgaagatgactctggcccaccgggggggagttactgggacagcgggtgcggcntg
gacagggaacgcctatacctgcccctgcttgactcttaccgtgacgtcatgacaggagca
ggttccttgagccccagtcccagccccgcttccagctcctcgtctcgtggatggctgagt
ccagcttccagctgtgactctcttctggtggaggaggaggagctcaacgaagcaaccgcc
cacttctgcctgtcgccctcctcgcgtcccacctctcccggcggcaaaaagcgcaggaac
tccccgctggcctcccccagcacctcccgcagaagcagctactcggaggatcacccctct
ctgacggactcaggagaaacctcggctcagtctcacacaccggcgagctgtgagctcaac
atcccgcagaagaccaggaagacgtctctggaacaggtgtcatcccgagaacttgaaccc
gagtcgacccccgttcaaaaccctccctgtcccgtcccagaggtgtctcagatgagaaga
gagcccccctcattaggcatggactacctgtccgtccctcccgctctgggctggggcaga
accagggccagcgctcacagtcccatttttaggtctaatgcactgccacctttggattgg
cctctgccatcacagttcgatcagtatgaactgcgcatagaagtgcagccacggccacac
catcgggctcattatgaaaccgaaggcagtcgaggagcagtgaaggcaacacctggaggt
catccggtggtgaagctcaccggttacaccgagagacagccgctctctttacaggtgttt
gtagggacggccgacgacaggtctatacggcctcatcctttctatcaaatacacagagtg
actggaaagatggtgggcacagccagtcaggagagcatccaggcgggcaccaaactgctg
gacatccccctcaaccccgagaacaacatgactgccctcatcgactgtgcaggtattctc
aagctgaggaactctgacattgagctcaggaaaggagagacggacgtagggagaaagaac
acccgagtgcgtttggtgttccgcgcacacctgcctctgtctccgcccatcgtcccagca
ggacgggtcttagccctgcaggtggcctctctgcccatcgaatgctcacagcgctccgcg
caagagcttcctgtcgtggaatcggtcagtctcacttcctgttcagctgaaggaggggag
gagcttatactggccgggaccaacttcctggccaactccagagttttctttatggagaga
ggttcagatggcaaagtccaatgggaggaagaggctcatgtagaccgagacaaaagcgat
gagagtttgctgtgtgtgcgagtgccggcgtacagtgatgtttcactgagtcacccggcg
tctgtctgcttgtacgtgtccaatgggaaacgcaagaggagcagcacgcactgtttcaag
tatctgcccatcatgtttagagaggaagatccactcatgtcccgtccttctcacttgccc
ctagaaggggtgactctttgccccgtggggaacagtggatcagacaggcatatgagacca
gatgtttccatcgacgacagaaacatgtccttccacctgcctccataccccagcgattac
tcctactcgcacgcctaccgggaggagtactgccataaaccggaggtccccgaggacagc
ggaggtcgaggtgccctgaccgaaaggcatcccagcttcgagagcctggagctgggcttt
accgagcttcttcctcccatgtacccaagagtcccgcaacctctgtccccctcaccgtcc
cactctccctggctggactccccgtatctgtcgtcctcaccgtctccctcacactcctgc
tctttgagcccgtatcccgccagcagcccgatctccggctctccgctcccgccgctctct
cattccctgtatcctcagtgctctcaggagatgtgctcatcacctccgtcaaacaccagt
cactatcaggagctgtgcccgccaccgtacagccagtacgagggctgggagcagcagatg
agaacctcctgtgaaagagacggtctgaagctggacggtccaccggacttcacaggacct
tcgccgatgcaacatatcacgttagaggaagtgaatgaattcattggagaagacatccaa
tcctttcagatgggtccacacatggacagtagacctggttga
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