Triplophysa dalaica: 130418096
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Entry
130418096 CDS
T09616
Symbol
zmp:0000000625
Name
(RefSeq) LOW QUALITY PROTEIN: cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
tdw
Triplophysa dalaica
Pathway
tdw04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
130418096 (zmp:0000000625)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130418096 (zmp:0000000625)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tdw04515
]
130418096 (zmp:0000000625)
04090 CD molecules [BR:
tdw04090
]
130418096 (zmp:0000000625)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
130418096 (zmp:0000000625)
Cell adhesion molecules [BR:
tdw04515
]
Cadherins
Major cadherins
130418096 (zmp:0000000625)
CD molecules [BR:
tdw04090
]
Proteins
130418096 (zmp:0000000625)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
130418096
NCBI-ProteinID:
XP_056600038
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All DBs
Position
3:complement(28376571..28481465)
Genome browser
AA seq
908 aa
AA seq
DB search
MHSHTSMPLISCMDLLLLFLLSASQMGEGSTVCRPGFSEDIYTTIMSETVLPGQPVFIVK
YVHCGRISHVRFECSHPEDFRISVDGVVYALRPLDTSHSWITPLLIKARDDVTGQQWQTR
VLLLSSGAQMSEKHGVPRTHIPEIVIPSHPIDRSLRRIKRGWVIPPINVAENSKGPFPMN
LVRIRSDNDESVSLRYSVTGPGADQPPTSVFSIDPISGQLSVLKPLDREHLPSFNLRAHA
VDLNGNQVENPVDIMIHVIDMNDNRPEFIQQIWNGSVPEGSKPGTSVMTVTSVDKDDPKT
ANSQLRYKIVSQNPASLSANMFTINNKTGSIITVAAGLDREKVPQYTLIIQATDMEGNPT
YGLSNTATAVITVTDVNDNPPEFTADTFFGEVSENQVDVVLVNLEVSDKDQPNTAAWDAV
YRITAGDPMGHFSVPTDSVSNKGLVTVIKPIDYEVNRAFVLTVVAVNEVPLQRGVHLSRQ
STATVSVRVNDVNESPYFEPNPKLLKLQEGPQTESVITTFTAQDPDRFMQQSLRYSTLSD
PGDWLRIDSINGRITTISMLDRESPYVQNNIYTASFLATDTGFPPASGTGTLQIHLLDVN
DNAPQFFPSEAKICDKPENSGINITALDADIPPNTGPFIFELPSQPAEVRENWTITQLSG
ENAQLGIKVDFMETGIYDIPITITDSGDMALSNTSYLRVKVCQCDHNGDCTAQDPIIGTG
LSTGATLTLLLCIISLLILMLLLVMWIKRQDKERIAKQLLIDPDNDLRDNIFKYDEEGGG
EEDQDYDLSQLQQAELENHGIGSTGVRRLDERPLHPQPQYPVRSTAPHLGDIEDFISEGL
RAADQDPTAPPYDSLLVFDYQGNGSTAGSLSSITSSSSGDGDQDYDHLNDWGPRFRKLAD
MYNGGTDE
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgcattcacacacgtcaatgccactgatatcctgcatggatttactgcttttattcctc
ctttcagcctcgcagatgggtgaaggcagcacagtgtgcagaccgggcttttctgaagat
atatataccaccataatgtctgaaaccgtgttgcctgggcagcctgtgttcattgtgaaa
tatgtgcactgtggcagaatatctcatgtgaggtttgaatgtagccatccagaggacttc
aggatatcagtggatggggttgtgtacgccctaaggccattggacacatctcactcctgg
attacacctctgctcattaaagctcgggatgatgtgaccggacaacagtggcagacccga
gtcttgttgttgtcttcaggggctcaaatgtcagagaagcatggcgtgcccaggacacat
ataccagaaatagtgatcccttctcatccgatagacaggtcactcagacggataaagaga
ggctgggttatccctccaatcaatgtggcagaaaactccaaaggacctttcccaatgaac
ctggtcaggattcgctcagataatgatgagagcgtgagtttacgctacagtgtgactgga
ccaggtgccgaccagccaccaaccagtgtcttctccattgaccccatttcaggacaacta
tcagtactgaagcctctggaccgcgagcacttacctagcttcaatttaagggcccatgct
gtggaccttaatggtaatcaggtggaaaaccctgttgacatcatgatccatgtaatcgac
atgaatgacaatcgaccagagttcatccaacagatttggaatggaagtgttcctgaagga
tctaaaccagggacatcagttatgactgtaacatcagtggacaaagatgatcccaaaact
gcaaacagtcaactccgctataagattgtgtcccagaatcctgccagcctgagcgccaac
atgttcactattaacaacaagacaggaagtatcatcactgttgcagctgggttagaccga
gagaaagtcccacaatacacactgattattcaagccacagacatggaaggaaacccaaca
tacggtctctccaacacagccactgctgtgatcacagtcacggacgtcaatgacaatcct
cctgagttcactgctgacactttctttggtgaggtatcagagaatcaagtggatgtagtc
ctggtcaacttggaagtctcggacaaagaccaaccaaacacagcagcgtgggacgctgtg
tacaggataacagcaggtgaccccatgggtcatttctctgtgcccacggattctgtttca
aataaaggcctggtgacagtcatcaagcctattgactatgaggtgaacagagcatttgtg
ctgacggtagtggctgtgaatgaggttcctctgcagagaggcgtccatctgtcccgtcag
tccacggccaccgtctctgtcagggtcaatgatgtaaatgagagtccctatttcgagccc
aaccccaaactactgaaacttcaggagggtccccaaacagagtctgtaataaccaccttc
actgctcaggatccagaccgcttcatgcagcagagcctcagatacagcacactgtctgac
cctggagactggctaagaattgattccataaatgggcgtatcacaaccatcagcatgttg
gacagagaatctccctatgttcaaaacaatatatacactgcttcattcttggccactgac
acagggtttcctccagccagcggtactggaactctgcagatccatctgctagatgtgaat
gataatgctcctcagtttttcccttcagaagcgaagatatgtgataaacctgaaaacagt
ggcatcaatatcacagcgctggacgcagacatacccccaaacactggacccttcatattt
gaactgccttctcaacctgctgaagtgagagaaaactggaccattacacaacttagtggt
gaaaatgcacagcttggtattaaagttgacttcatggagactggaatctatgatattccc
attacaatcacagactcgggtgacatggcgctgtccaacacctcatacctgcgagtgaag
gtttgtcagtgtgatcataacggagactgcacagctcaggatcctatcataggcactgga
ctgagcacaggagctaccctgacccttctgctctgcatcatcagcctcctcatcctcatg
ctgttgttggtcatgtggataaagagacaagataaggaacgaattgccaagcaactgctg
atcgatccagataatgatttgagagacaacatcttcaaatatgatgaagaaggaggaggc
gaggaagaccaagattatgacctgagtcagctgcagcaggcagaactagagaaccatggc
atcgggtccactggtgtacgcagactggacgagagaccgctgcaccctcagccccagtat
cctgtcagatccaccgccccccatcttggagatattgaagacttcatcagtgagggtctg
agagcagctgaccaggatcctaccgctcctccatacgactcactcttagtgtttgactac
cagggcaacggctctacggcgggatcgctcagctcaatcacttcctcctccagcggtgat
ggtgaccaggattatgatcatctcaatgactggggtccacgcttcagaaaacttgctgac
atgtacaacggtggtacagatgaatga
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