Triplophysa dalaica: 130418142
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Entry
130418142 CDS
T09616
Symbol
focad
Name
(RefSeq) focadhesin isoform X1
KO
K27498
focadhesin
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130418142 (focad)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
130418142 (focad)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Focadhesin
DUF3730
Motif
Other DBs
NCBI-GeneID:
130418142
NCBI-ProteinID:
XP_056600089
LinkDB
All DBs
Position
1:complement(27566965..27636465)
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AA seq
1809 aa
AA seq
DB search
MTENLKTRFGFPSTLIQAQAVRSLVTSVLKEKGLNEKISQTSTKGRALETLWDQCSSDDT
FVRSACCDALLLIVDQEHADLQYVLNTTLNLLPSARNVQGLIKVVGRLLQIQASRRDNGV
NFTCPYSIRSFPHPYITIMENRPDCWPALLQEIDDFIQLAADRDEPVFVEMLVPFLRYLY
CEPQRLSENALLRHSLLRVLLQPRGASQSDSQLGKGPTGTRVGRELIRSLFDLFPYMLVD
SVTALVEFGCFVESLSSALLTDPSVWKKELPQLALQLLCACHLSVQLGGELMSLLHTLHQ
LIPAYAEELPFEQVIMGISLLLLRASTSQQTAILELAVKIVPPEISPPPGSSVLVMPLLQ
VLSCLTLMEALTDGEKHTKTIKLANSLLQTIQREPSVQKEKSTQLSLPLSTWYSDLQVAT
SVLHRISKDSMCAVEWLYSLQSSLSVCEHVPNAVCLLISHLIVSSDGDICRLALDTAAAI
AETDPAKVPCLLPVLMFKLDRVSDPALSHSVLYTMPRLGTHKFCIPQVLHVLQTLGSSPR
LRPMALRLLVLLWKKQDRVYPDLQRLMSQLDSSSVVMGRDTQWEQILARAACVRDICRER
PYQHGGDMLSAITETLTQFFRKDQAFPAALTLQGLKELCRTEVVDIMSTWRALSPKLCCD
TRPMILKATADLLSLVPALNVKTEEYEKFKSETVSVLWGYALSQDPEVASHGFKALSEYP
ETSHTILHLPEQARPVPNQSDNEGERKDNENNDEKDECISVPGSSYVKLLRFTPQTVLPA
LETFLTALARQEMNQMPRGVYHSALSGGTLRSDQGKTVAGIPLFMLKTYEKNKQPGLKPG
LAAGLLFSYDLPVQSDKDGRPITRFLVSRGRSYQQMLATLIHEVNIQPSEWHRSLLLPQA
WRGFMSRTYHALIQGRKAELAMLQTHGKENPEELQYKQHWAWLWVRDQLTDVVKSATKDS
PVVQGNSILALSGLAVVLTRYESNLPTQSESGFEVGPDILPTTHWLSMVIDTLLSIVSSN
SNSKGQIFPWFIHRSYSGENTASVIARSCAALGLALLVPVLVMSRRESVPAVLSTLAAGL
PGSPTADESQAVQFHSGLALGMFLACLQNEKVSDISGRSVTELLMEHFQLLEACCFKTHL
EYNAGCVLGVGLVLSSLSSSSQSEHDRCCVSLKLDRLLQTFHDSSSMSRVQQEVLAFSVG
CVGVSAFSSGIIEASKAEETMNILRSLAEESQQTPGFALALGLMVNGLSSCGHGKAVDIQ
PRLLAAWTKILLAEGCPTMQRLSALNGLVALVGSEAALIQGKCESEQSSQQRSRLNEVIR
AITQIITFSGTIGLQSNGACLLGHLHLANMCSGHSRIAVPQEFGYLTEKSVIRACVDFII
EAGRKGPEFNPPHFVKTAMAALATVGANVQFPPINWNAVLSPLMRLSFGEEVQHHCLELA
SIQAQTSQSASIFLSIWIVPPLVHSLSLRTRAYLYECLCCWMKHVAEEKLQVYLDCLAVQ
QFEADTRPHRMPLCLSILRGLSKALAVPNPPQSCWSSLCSTTEKIYNQLPDKIQAGEGDL
YEEICLCLFELSDTEIDRLVNVTEANLEKTTFILSYLTSKGRVPLLGLNDVISTILQVGN
KERISWLLLQALHQSRFASSANTGVSKRMEWLLELMGHIRNVAYGSPSVKCVNVIEGTDF
LLNVFAAAVVSWADHCAPLLVGIRAQWFPWRQSSQKLGLVSDLFVSPASTELSVASCLIG
IPSSIKKLLAKEPWKSQLQKFIDWLFSIIEHPGKGFSKTAICIAKASLMALRTTPEFKKK
VVWTRAYGW
NT seq
5430 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaaacttaaagacaagatttggattcccaagcacactcattcaagctcaggct
gtgaggtccctggtcacttcagtacttaaagagaaaggcctaaatgagaagatttctcaa
accagcactaaaggcagagcgctggagactctatgggatcagtgcagcagtgatgatact
ttcgtccgctcagcctgctgtgatgctcttttgctgattgtggaccaggaacatgctgat
ctgcaatatgtcctcaacaccaccctcaaccttttgccctctgcaaggaatgttcaaggg
ctcataaaagtggtcgggcggttgttacaaattcaagcaagtcgacgagataatggagtg
aacttcacctgtccatattcaatcagaagcttcccacacccctacatcacaataatggaa
aaccgtcctgactgctggcccgctcttctccaggagatcgacgatttcattcagctggct
gctgacagagatgagccagtgtttgttgaaatgttggttccttttctccgctacttgtat
tgtgagccacagaggttatcagaaaatgccctgctaagacacagtctcctcagggtcctg
cttcagccacgaggggcttctcagtctgatagccagctgggcaaagggccgactggcact
agggtgggccgcgaactgattcgcagcctctttgacctgtttccgtacatgctggtggat
agtgtaacagcactggtggagttcggctgttttgtagagtctttgagctctgctctgctc
accgatccaagtgtctggaagaaggaactgccccagcttgctcttcagctcttgtgtgcc
tgtcacctcagtgtgcaactgggaggagaactgatgtctctgcttcatacactccaccag
ctaatacctgcatatgcagaggaactcccatttgagcaggtgatcatgggcatctccctt
cttcttcttagagcttccacctcccagcaaactgctatcctagagctcgctgtgaagatt
gtgccacctgagatcagtcctccaccaggttcttctgtgctggtgatgcccttgttgcag
gttctttcctgcctcacccttatggaagctctcacagatggtgaaaaacataccaagact
attaaactggccaattcactcttgcaaacgattcagagagaaccatctgttcaaaaagag
aagtccacacaactgagcttgcctctcagcacctggtacagtgaccttcaggtggccact
agtgtcttacaccgcatttccaaggactccatgtgtgctgtggaatggctttactctctg
cagtcttcactgtctgtctgtgagcacgtcccaaatgccgtgtgtcttctgatatcacat
ctcattgtctccagtgatggggacatctgccggttagcactggacacagctgctgcaatt
gcagagacagaccccgcaaaggtgccttgtctactacctgtcctaatgtttaaactcgac
agagtatctgatccggctttgtctcactcggttctctatactatgccaagactgggaacc
cacaagttctgtataccgcaagttcttcatgtactccagacactgggcagttcacctaga
ctgaggcctatggctctgcggctccttgttctcttatggaaaaagcaggatcgtgtgtat
ccagatctgcagagactgatgtcacagttagatagctcctcagtggtcatgggaagagac
actcagtgggagcagatattggctagagcagcctgtgtcagagatatctgcagagagagg
ccttaccagcatggaggagacatgctgtcagccatcactgagacactgacacagttcttt
aggaaggatcaagctttccctgctgctctcacactgcagggcttaaaggagctctgtagg
actgaggtagttgatatcatgtctacatggagggcactctctcctaaactatgctgtgac
accagacctatgattctaaaggccacagctgaccttttgtcattggtacctgctttgaat
gtaaaaactgaagaatatgagaaattcaaaagcgagacagtgagtgttttgtggggctac
gctcttagtcaggatccagaggttgcaagccatggttttaaagctctttcagagtacccc
gagacatctcacaccatcctgcatcttccagagcaggccagacctgtaccaaatcaatct
gacaatgagggtgaaaggaaggacaatgagaataatgatgagaaagacgaatgtatttcc
gtgccaggatcatcatatgttaagctacttcgattcacaccacaaacagttttaccagct
cttgagaccttcctaacagctttggcgaggcaggagatgaaccaaatgccccgtggagtg
taccattcagctctgagtgggggaactctgcgctctgaccagggaaaaactgtagctgga
attcctttattcatgttgaaaacgtacgaaaagaataagcaaccaggcttgaagcctggc
ttagcagctgggcttctgttcagttacgaccttcctgttcagagtgacaaagatggacga
ccaatcacacgcttccttgtcagcagagggcgaagctatcaacagatgttagccacactt
attcatgaggtgaacatccagccatctgaatggcatcgctctctgctcctgcctcaagcc
tggcgtggcttcatgagccgcacatatcatgcactcatccagggccggaaggcagagctg
gcaatgttacagactcatggtaaagagaatccagaggagctacaatacaaacaacattgg
gcctggctctgggtcagagaccagctgactgatgtggtcaagtctgctaccaaagatagt
cctgttgttcagggtaattccatcctggcactgagtggcctggctgttgtcttaaccaga
tatgagagcaacctacctacacaatctgaaagtgggtttgaggtgggcccagacatcctt
cccacaactcattggctgtcgatggttattgacacactactaagcattgttagcagtaac
agtaactctaaaggacagatcttcccctggttcattcatcgctcatattcgggggagaac
acggctagtgtgatcgcccgatcatgtgccgctttgggcctggcattgctggtgcccgtg
ctggtgatgtcacgcagggagagtgtgcctgctgtactgagcactctggcggcggggctc
cctggctcgcccactgcagatgaatctcaggcggttcagttccacagcgggctggctttg
ggcatgtttctagcttgcctgcaaaatgaaaaagtcagtgatatatctgggcggtcagta
acagagctgttgatggagcattttcaactgttggaagcttgctgcttcaaaacacatttg
gaatacaacgctggttgcgtgttaggtgttgggttggtcctgagttcactcagcagcagc
agtcaatctgaacatgatcgttgctgtgtgtctcttaaattggacagactccttcagacc
tttcacgacagcagcagtatgagccgcgtgcaacaagaggttttggccttttctgtgggg
tgtgttggagtatcagcatttagctcaggaattattgaggccagtaaggcagaggaaacc
atgaacatacttcgctctctggcagaggaaagtcaacagacaccaggctttgccttggca
ttggggctgatggttaatggtctctcttcttgtggtcatggtaaagctgttgacatccaa
cctcgtctgttagcggcctggaccaaaatactactggcagaaggatgtcccacaatgcag
aggctatctgccctcaatgggctggttgctttggttggatctgaggcggctctaattcag
gggaagtgcgaatcagagcagtcttcacaacagcggagcagactgaacgaggttatccga
gctatcacacagatcatcaccttctctggaacgattggtctgcagtcaaatggggcctgt
ctgctcggacacctgcatctggcaaacatgtgcagcggccacagtcgaatcgcagttcct
caggaatttggatatcttacagagaaaagtgtcatccgggcatgtgtcgactttatcatt
gaagcagggaggaaagggccagagtttaatcctccacatttcgtaaagacagcgatggca
gcattagccactgttggtgcaaatgtccagtttcctccaatcaactggaatgcagttctc
tccccactaatgagactcagttttggtgaagaggtccaacatcattgtttggagttagcc
agcattcaggcccagacctcccaaagtgcttcaattttcctcagcatttggattgtgcca
ccccttgttcatagcctgagtctccgcacaagagcttatctctacgagtgtttgtgctgc
tggatgaaacatgtagctgaagaaaaactgcaagtgtatttggactgcctggcagtccag
cagtttgaggcagacacacgtccccaccggatgcccctctgcctctccatcctgcgtggc
ctgtccaaagctttggctgttcccaaccctcctcagagctgctggagcagcctgtgctcc
actaccgaaaagatctacaaccaattacctgataaaatacaggctggggaaggggacctg
tatgaagaaatatgtttgtgtctatttgaactaagtgacacagagatcgaccgccttgtc
aacgtaactgaggctaatttggaaaaaacaactttcatcctgtcctacttgacttctaaa
gggagagtccctctccttggccttaatgatgtcatcagtaccattcttcaagtggggaat
aaagaacgaatcagctggcttcttctgcaggccctccaccagtcacgctttgcctcgagt
gccaatacaggtgtctctaagagaatggagtggctgttagagctaatgggccatatcaga
aatgttgcatatggatctccctccgtgaaatgtgtcaatgttatagagggcacagatttt
ctgctgaatgtgtttgctgcagcagtggtgtcttgggctgaccattgtgcacctcttctt
gttggaatcagagcccagtggtttccctggcgacagtcctctcagaaattaggactggtc
agtgatctctttgtcagccctgcctccactgagctgtcagtggcatcatgcttaattgga
attccatccagtattaagaaactacttgccaaagagccgtggaagtctcaattacagaaa
ttcattgactggctcttcagtatcatcgaacatcctgggaagggcttctccaagactgcc
atctgcatagccaaagcttcattgatggctctgagaaccactcctgagttcaagaagaag
gttgtgtggaccagggcttatggctggtga
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integrated database retrieval system
