KEGG   Triplophysa dalaica: 130418171
Entry
130418171         CDS       T09616                                 
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
tdw  Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdw03019]
    130418171
   04121 Ubiquitin system [BR:tdw04121]
    130418171
Enzymes [BR:tdw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130418171
Messenger RNA biogenesis [BR:tdw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130418171
Ubiquitin system [BR:tdw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130418171
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP KH_BICC1_1st KH_2 zf-C3HC4 KH_DEAH11_2nd RING_XB3-XBAT31 KH_PNO1_2nd Prok-RING_4
Other DBs
NCBI-GeneID: 130418171
NCBI-ProteinID: XP_056600136
LinkDB
Position
3:24510933..24515394
AA seq 603 aa
MPSPLFHPDIMDHDMVVSTTGQSNGVSLPPARDTDKESRDEDHQEALLFALDQLSRMALE
KVDCLDGATGSENCNGGGGYIDLQMLEHTNGSRESPGSCSPSPEYYGSGGSGGYHMAGSH
AILADQSSMLRKRSVNMTECVPVPTSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEDP
VFIVTGRREDVEMAKREIISAAEHFSMIRASRCKAGGSGPSSGGSLPGPPNLPGQTTIQV
RVPYRVVGLVVGPKGATIKRIQQQTHTYIVTPSREKDPVFEVTGMPENVDRAREEIETHI
TLRTGAFVDLQGDNDFHNNGTDVSLEGLGSLGLGGTLWSRTSHSAPPPPPATHHHSTRKM
SSASYSNGALSSETFSASRRATDSGSPTSPFSTSSAGGSFSFGGDSTPGLAGTMEDIGFE
LTGGNIWAPFVNGSKQQPKLRRNSSGLSGGAVTPRLSPTLPSDVPGIDHPLARRAQSDPL
SAISWLQAGGGSFSGGSSSSGGSSTGYSSCSASSLPGGSPTDSEGGGSGVAMATSMLGRL
KAGVVPCGSRDCFVCCESEVTAALVPCGHNLFCMDCAGQICQSQEAECPVCRTPATQCIR
IFS
NT seq 1812 nt   +upstreamnt  +downstreamnt
atgcctagccccctgtttcaccctgacatcatggatcacgatatggtagtgagcaccacc
gggcaatccaacggggtcagtctgccccccgcccgggacacggataaggagtcccgggac
gaagaccatcaggaggcactgctctttgctttggatcagctgtcacgcatggcgctcgag
aaggtcgattgtctggacggggcaacgggaagcgagaactgtaacggaggcggcggttac
atcgacttgcagatgctcgagcacacgaacggctcgcgagaatcgcccggctcgtgctcg
ccatctccggagtattacggttcggggggcagcggcgggtaccacatggccggctcgcac
gccatcctcgcggatcaaagctcgatgcttcggaagaggagcgtcaacatgaccgagtgc
gtacccgtgcccacgtcggaacatgtggcggaaattgtcgggagacagggttgcaagatc
aaagctttgagagcaaaaacaaacacttacatcaagacccctgtgagaggagaagacccc
gtgttcatcgtaacaggcaggcgtgaagatgtggaaatggccaagcgagagatcatttct
gcagccgagcacttctccatgatacgcgcctcgcgctgtaaagcaggcggaagtggtccc
agttcgggcggatctcttcccggacctccaaacctgccggggcagaccaccatccaggtg
cgagttccgtatagagttgtcggtctggtggtgggtcccaaaggagccactatcaagcgc
atccagcagcagacgcacacttacatcgtcacgcccagtcgtgagaaagaccctgtgttt
gaggtgaccggaatgccagagaatgtggaccgtgcccgagaggagatcgaaacgcacatc
acactccgcacgggcgcctttgtggatctccaaggcgacaacgacttccacaacaatggc
acagacgtcagcctagagggcctgggatcactgggtctggggggcacgctgtggtctcgt
accagccactctgcacctcctcctcctcctgccacccaccaccactccactcgtaagatg
tcatccgcatcctactccaacggcgcgctgagttcagaaacattctctgcatcgcgccgg
gcgacagatagcgggagtcccaccagccctttcagcacaagcagtgccggtggcagtttc
tcttttgggggagattccacccccggcctcgccggtaccatggaagacatcgggtttgag
ttaaccggcggtaacatctgggctcccttcgtcaacggcagcaagcagcagcctaagctt
aggcgcaacagcagcggcctcagcgggggcgctgtgaccccgcgcctgtcacccaccctg
ccctctgacgtgcctggcatcgatcacccgctggcacgccgggcgcagagtgaccccctc
agcgccatctcctggctgcaggcgggcggcggctccttctcaggtggcagtagcagcagc
ggcggaagctcaaccggttactcatcctgctcggcctcatcacttcctggtggctcaccc
actgactccgagggaggaggcagtggcgtggccatggcgacttccatgctgggccggctg
aaagcgggcgtggtgccctgcggaagcagggactgttttgtgtgctgcgagagcgaggtg
actgccgcattggttccctgcgggcataacctcttctgcatggattgcgccggtcagata
tgccagtcgcaagaggcagagtgtcccgtgtgccgcacccctgccactcagtgcatccga
atcttctcttaa

DBGET integrated database retrieval system