Triplophysa dalaica: 130418253
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Entry
130418253 CDS
T09616
Symbol
aire
Name
(RefSeq) LOW QUALITY PROTEIN: autoimmune regulator
KO
K10603
autoimmune regulator
Organism
tdw
Triplophysa dalaica
Pathway
tdw04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
130418253 (aire)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130418253 (aire)
04121 Ubiquitin system [BR:
tdw04121
]
130418253 (aire)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
SAND domain-containing proteins
130418253 (aire)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130418253 (aire)
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Ortholog
Paralog
GFIT
Motif
Pfam:
HSR
PHD
PHD-1st_NSD
SAND
Prok-RING_1
PHDvar_NSD
Motif
Other DBs
NCBI-GeneID:
130418253
NCBI-ProteinID:
XP_056600269
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All DBs
Position
3:10642774..10647119
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AA seq
495 aa
AA seq
DB search
MSRVEGYGKSDLRFQLRACRTEIAMAIHDPFPLLYGLADHDIISEQILKETLERKKKDGI
HKAVYSLLTLLLDRDVAILQAFWNNLWKEYNKESYPKLETLFINLPKGLRQMVRHTGNPR
LELQARGQTGKKRGAAEKQLSHRPHHFTKRASSSSGGKGKCKRKTDGAALSHAFVKACVQ
AVSTSVQRAVTVSTSDRPTACGTMEGILIQKVIESGSAKKCIKVGGEFYSSGKLDEGAGH
KTAQNYTHQQGEPNTRAMDHLYYIVIIVFXVGRNDDECAVCRDGGELICCDGCPRAFHLT
CLMPPLTSIPSGTWRCQLCHSNRANERPYNSSQPAVHIPLMETSSGSAVDFSFFSSMSST
SLSTVTGDKSAQSTGLQSADGEMASVRIACGICHLTRGELITCPQCLQSYHSHCHFSNGK
TKCRNCSRNWGSEREASINSLQMNQHISDQSLAPSEQLLNKDEVDSIMGESSIDGILQWA
FHNISRPISDSQGYF
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagggtagaaggttacggaaagtctgacctgcgcttccagctacgagcatgtagg
actgagatcgccatggcaatccatgaccccttcccactgctgtacggactggccgatcat
gacatcatctctgaacagatcctgaaggagacgttagagcgaaagaaaaaagacggaatc
cacaaagctgtctactccctcctaactttacttctggatcgggacgttgccatcctccag
gccttctggaacaacctttggaaagaatacaacaaggagagttaccccaaactggaaact
ttgtttatcaacctccccaaaggactaaggcagatggtcagacacaccgggaaccccagg
cttgagctgcaggctcgtggccagacgggcaagaagagaggggcagcagaaaaacagcta
tcccatcgccctcatcacttcaccaaaagagccagctccagctcaggaggcaaaggaaag
tgtaagaggaaaacagacggtgcggcactttcccacgcgtttgtgaaagcgtgtgtccag
gctgtctctacctcagtccagcgggccgtgaccgtgtccacaagcgaccgtcccactgca
tgcgggacaatggaggggattctgatccagaaagtcattgagtctggaagtgccaaaaaa
tgcatcaaagttggtggagagttttactcttcgggcaaactggatgagggagctggacac
aagaccgcacaaaactatactcaccagcagggggagccaaacaccagagcaatggatcat
ctgtactatatcgtcatcattgttttttaggtcgggcgtaatgatgatgagtgtgcggtg
tgtagagatggtggcgagctcatctgctgtgacggctgtcctcgtgcctttcacctcacc
tgcctgatgccaccccttacctccatacccagtggtacatggaggtgtcagttatgccac
agcaacagagccaatgagaggccatacaactcctcgcagcctgctgttcatattcccctg
atggagacaagctccggctctgctgtggacttttccttcttctcctctatgtcctccact
tcactttccacagtcactggagacaaaagtgctcagtccacgggccttcagtccgcagat
ggtgaaatggctagtgtcaggatagcttgtggaatttgccacctaactcgaggagagctg
atcacctgccctcagtgccttcagagctaccattcccattgccatttctcaaatggaaag
actaaatgtaggaattgctccaggaattggggttcagaaagggaagcttcaatcaacagt
cttcagatgaaccagcacataagtgatcagagcttagcaccctcagagcaactgctgaac
aaagatgaagtggactctataatgggggagagctctatagatgggatcctgcagtgggct
ttccacaacatttcacgccccatctctgactctcagggctatttttag
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