Triplophysa dalaica: 130418303
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Entry
130418303 CDS
T09616
Symbol
gbp2
Name
(RefSeq) LOW QUALITY PROTEIN: guanylate-binding protein 1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
tdw
Triplophysa dalaica
Pathway
tdw04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
130418303 (gbp2)
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
DUF7607
Motif
Other DBs
NCBI-GeneID:
130418303
NCBI-ProteinID:
XP_056600353
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Position
3:18648376..18654609
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AA seq
616 aa
AA seq
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MACGGRMPAPVCLIENDDNGKLMVSKEGKDVLDGITEPVVVVSVVGLYRTGKSYLMNRLA
GQQAGFALGSTIESKTKGIWIWCVPHPSKEGHTLVLLDTEGLGDVQKGDEKHDTWIFCLA
VLLSSTLVYNSLGVIDNTALEKLHYVTELTENIRVKANPSTDEDESADFMRVFPSFVWAV
RDFTLELKIADEPITSDQYLERSLTLKTGTSPQTVRFNLPRQCLRNFFAVRKCFVFPRPA
GTEDMRKMETLTEEDLEPEFLQQTNTFCDYIYNCTEPKSLSGGRAVTGTALGNLAEVYVE
AIRSGKVPCLENAXRAVEQAMELYMKEMFERTQLPMNPEDLSDVHQMAEKAAVGRFITMS
FNDNEQTHQKDLIEKIYNNYQEMCYQNQQEFIQQCEAVRRDVFETLENAISAGLYMNPGG
YREYKDTLKELTNEYRTKTQSKLMSEEVLSMYLKEKEDVGKMILQCDQSLSASEHAREVE
RLRTEVIEQRQRSLEEQNRLQMQAFQDMQRSHDEHVNHLMHQMEREQERLRRDNERVLDA
KLKEREALLTQGFQRDADRMQRNIDSLKADIRKEEESKPSTLGRVLDGIGTAATFVLPGF
VPKAIGAGLSFISRLF
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgtggtggacgcatgcctgctccggtgtgtctcattgaaaatgatgacaacggc
aaactgatggtgagtaaagagggcaaggacgttctggacgggatcactgagccggtggtc
gtcgtgtctgtagtgggactctaccgtaccgggaaatcttatctcatgaaccgcttagcg
ggacaacaggcaggctttgctctcggcagcacgatcgaatccaagaccaaaggcatctgg
atctggtgtgttcctcacccaagtaaagaaggccacactctggtgcttctagacacagag
ggacttggtgacgtacagaagggggatgagaaacatgacacatggatcttctgtctggct
gttctgctcagcagcactctggtgtacaacagcttaggggtcattgacaacacggcgctg
gaaaaattgcattatgtgacagaactgacggaaaacattcgcgtgaaggcaaacccaagc
acagacgaggacgagtctgctgatttcatgcgggttttcccgtcttttgtctgggctgtt
cgggacttcactctggagttgaaaatagccgatgagcccataacatcagaccagtatctt
gagagatcgctgacactcaagacaggtacttctcctcaaacagtgaggtttaaccttcct
cgccagtgtctgcgcaatttctttgctgtgaggaagtgctttgtctttcctcgacctgct
ggaacagaagacatgaggaaaatggagacgttaactgaggaggacctggagccagaattc
ctacaacagacaaacactttctgcgattacatttacaactgcacagagccgaaaagtctc
agcggaggtcgtgcagttacaggaactgctctaggtaatctggctgaagtgtatgtggag
gccatccgcagcgggaaggttccctgtctggagaacgcgngacgtgcggtggaacaggcc
atggagctttacatgaaagagatgtttgaacgcactcagcttcccatgaaccccgaagat
ctgtctgatgtccaccaaatggcagagaaggcagctgttggacggtttatcaccatgtcc
ttcaatgacaacgaacagacacatcaaaaagatctcatagaaaagatctacaataattat
caagagatgtgttaccagaatcagcaggagtttatacaacagtgtgaagcagttcggcgt
gatgtgtttgaaactttggaaaatgccatttctgctggattgtacatgaaccctggagga
tacagagagtacaaagatacacttaaagagctgaccaatgagtacagaacaaagacacag
tcaaaactaatgagtgaggaagtgttaagtatgtacttgaaagaaaaggaagatgttgga
aagatgattttacagtgtgaccagtctctcagtgcatctgaacacgcaagagaagtggag
aggttaaggactgaggttatagagcagcgacagaggagtctagaggaacagaaccgctta
cagatgcaggcgtttcaggacatgcagagatcccacgatgagcatgtgaatcacctcatg
catcagatggaaagagagcaagagagattgagaagagacaatgaacgagtcctcgatgca
aaactcaaagagagggaagctcttctaactcagggcttccagagagatgctgatcgcatg
cagagaaatattgacagtttgaaagcagacattaggaaagaagaggaatctaaaccctcc
acacttggccgtgttctagatggtatcggtacagcggctactttcgtcttgcctggtttc
gtacctaaagcgattggtgcaggtctgtcctttatctcacggcttttttga
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