Triplophysa dalaica: 130418308
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Entry
130418308 CDS
T09616
Symbol
ptch2
Name
(RefSeq) protein patched homolog 1
KO
K11101
patched 2
Organism
tdw
Triplophysa dalaica
Pathway
tdw04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
130418308 (ptch2)
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GFIT
Motif
Pfam:
Sterol-sensing
TRA2_N
Patched
MMPL
Motif
Other DBs
NCBI-GeneID:
130418308
NCBI-ProteinID:
XP_056600357
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All DBs
Position
3:5500983..5525985
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AA seq
1448 aa
AA seq
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MATDPRDPGAGVVFGDLPPSYTRSPPPVNSDLLRRPSYCHAAFALKQISKGKAVGQKAPL
WIRAKFQAFLFSLGCHIQRHCGKVLFIGLLVFGALSVGLRVAAIETDIEKLWVEAGSRVS
KELRYTKEKQGEESVFTTQMLIQTPKQEGTNILTQEDLLLHLEAALSASKVQVSLYGKSW
DLNKMCFKSGVPIIENVMIERMIDKLFPCMIVTPLDCFWEGSKLQGGSAYLPGMPDIQWM
NLDPIKLMEELSQFTSLEGFREMLDKAQVGHAYMNRPCLDPNDTDCPHSAPNKDPQQVPD
IAAELQGGCHGFSKKFMHWQEELILGERVKDSQNALQSAEALQTMFLLMSPKQLYEHFKD
DYEIHDINWNEDKATAILESWQRKFVEVVHGSIPQNASSNVYAFSTTTLNDIMKSFSDVS
VIRVAGGYLLMLAYACVTMLRWDCAKSQGAVGLAGVLLVALSVAAGLGLCSLLGLSFNAA
TTQVLPFLALGIGVDDMFLLAHSFTQTRSNIPFKERTGDCLRRTGTSVALTSINNMIAFF
MAALVPIPALRAFSLQAAIVVVFNFAMVLLIFPAILSLDLHRREDKRLDILCCFYSPCSS
RVIQIQPQEFSDANDNHQHATATPTYAGSTITTSTHITTTVQAFTQCDAAGQHIVTILPP
TSQISTSPPSMVLSTPTPTTDPYGSQLFTNSSSTRDLLAQVEEPKEGRECVPLPFFRWNL
SRFAREKYAPVLLKPETKTVVVVVFVALLGLSLYGTTMVHDGLYLTDIVPRDTKEYDFIS
SQFKYFSFYNMYLVTMDGFDYAHSQRQLIQLHNAFNTVKYVIKDSNHKLPRMWLHYFQDW
LRGLQSTFDADWKAGRITRDSYRNGTEDGALAYKLLIQTGSKKDPFNYSQLTTRRLVDED
GLIPPEVFYIYLTVWVSNDPLGYAASQANFYPHPREWIHDKYDTTGENLRIPAAEPLEFA
QFPFYMNGLRQASDFIEAIESVRSICEEFMRQGIKNYPNGYPFLFWEQYIGLRHWFLLSI
SIVLACTFLVCAILLLNPWTAGVIVFILAMMTVELFGIMGLIGIKLSAIPVVILIASVGI
GVEFTVHIALGFLTAIGDRNTRSAVAMEHMFAPVIDGAISTLLGVLMLAGSEFDFIMRYF
FAVLAILTLLGILNGLVLLPVLLSLMGPPTESVPVNNANQLQSPSPEPMPPPMNHHGYYT
GNMPKAPRQAFSEPSESDYYSETTTTSGIGEEEYKYCDRSPYITPPAQSPTSHILLEASK
NPSFPKLTVVKPFHETGTKGQLSESAQNAVNSVSSQITRWDNKHEYQGPKRQHLPSDRTH
CPHRTTQCGPGPQPGRRQQQNRTTAPANGAGALQRPNNAITMVTATASVTVAVHPSLPGS
YQGYMHEGFEDTESDSFEDSKRTSQTYGKTSNYKTDSLELQDLEPTENSQHQSNQALGGA
WIQAAKDC
NT seq
4347 nt
NT seq
+upstream
nt +downstream
nt
atggccacggatcccagagacccgggggccggtgttgtttttggagatttacccccgagc
tacacgcgctctccgccgcctgtgaactcagatctcctccggagacccagttactgccac
gccgcttttgcgttaaaacagatttctaaggggaaagctgtgggacagaaagcaccactg
tggattcgggcgaagttccaggcttttctcttttctctgggctgtcacatacagcgacac
tgtggaaaagtccttttcatcggacttcttgtattcggagccttgtctgttggtttacga
gtggctgccatcgaaacagacatcgagaagctatgggtggaagccggcagtcgagtaagc
aaggaactgcggtacacgaaggagaagcagggagaggagtcagtgttcaccacccagatg
ctcatacagacacccaaacaggaaggaaccaatattcttacccaggaggatttgctgctc
cacctggaggctgctctatcagccagcaaagtccaggtgtctctttatggaaaatcttgg
gatcttaataaaatgtgcttcaagtctggagtcccgattatagagaatgtcatgattgag
aggatgattgataaacttttcccctgtatgattgtgactccattggactgcttttgggaa
ggttccaagttgcagggaggctctgcctacttaccgggaatgcctgacattcagtggatg
aatttagaccccatcaagctgatggaggagcttagccagtttacgtctctggagggcttc
agagagatgctggataaggctcaggtgggccacgcctatatgaaccgcccttgcttggac
cccaacgacacagactgcccgcacagtgcccccaataaggacccgcagcaggtccctgac
attgctgcggagcttcagggcggttgccatggtttctctaagaagttcatgcactggcag
gaggagttgatcctgggcgaaagagtaaaggactcccagaatgctttgcagagtgccgag
gcccttcagaccatgttccttctcatgagtcccaaacagctctacgagcactttaaagac
gactacgagatccacgacatcaactggaatgaggacaaggccactgccatcctggagtcc
tggcagagaaagtttgttgaggttgtgcacggtagcattcctcagaatgcttcttctaac
gtttatgccttctctaccaccactctcaatgacattatgaagtctttctccgacgtcagt
gtaatccgggtggcaggtggttatctgctcatgcttgcatatgcatgcgtcaccatgctg
cgctgggactgtgctaagtctcaaggtgccgttgggctggcaggagtgctgttggtggct
ttgtctgtagctgcaggacttggattgtgttcactgctggggctttccttcaacgccgcc
accacacaggtgctgccgttcctagccctggggattggagtggatgacatgttcctgctg
gctcattcctttactcagaccaggtccaatatcccattcaaggaaagaacgggtgactgt
ctgagaagaacaggcaccagcgtggcgctgacctccatcaataacatgatcgctttcttc
atggctgccctagtgcctattcctgctctccgggccttctcgcttcaggcggctattgtg
gtggtctttaatttcgccatggttcttctgatcttccctgccattctgagcttggacctg
cacaggcgtgaggacaaaagactggatatcctgtgctgtttctacagtccctgttcatct
cgagttatccagatccagcctcaagagttctctgatgccaatgacaaccaccagcacgcc
actgccacccccacctatgccggttccactattaccaccagcacccacatcaccacaacc
gtccaggcttttactcaatgtgatgctgctggccagcatattgtcaccatactgcctccc
acctcccagatttccaccagccctccatccatggttctctccacccccactccgaccacc
gatccttatggctcccagttgttcacaaactccagctccacccgagacctcctggcccag
gtggaggagcccaaagagggccgcgagtgtgtgccgctccctttcttccgctggaatctc
tcccgctttgcacgagaaaaatacgcccccgtgttgcttaagccagaaaccaagactgtg
gttgttgtcgtttttgtcgctcttttgggccttagcctctatggcacaacaatggttcat
gatggactctacttgactgacattgtccctagggacacaaaggagtatgacttcatctcg
tcccagtttaaatacttttccttctataacatgtacctggttactatggatggctttgac
tatgcccattcccaaagacagcttatacaacttcacaatgcctttaacactgtgaaatat
gtgattaaggacagcaatcacaaactgcccagaatgtggctccattacttccaggattgg
ctcagaggtttgcaatctacattcgatgctgattggaaggcaggcaggatcacccgtgac
agctatcgcaatggcactgaggatggagcacttgcgtacaagcttcttatacagactggc
tccaagaaagacccttttaactacagccagctcacaacccgtcggctggtggatgaggat
ggtctaatcccccctgaggtgttctacatttacctgacagtatgggtcagtaatgatcca
ctgggttatgctgcctctcaagccaacttctaccctcaccctcgggagtggatccatgat
aagtacgacaccactggggagaaccttcgcatccctgcagctgagcctctggagtttgca
cagtttcctttttacatgaacgggctcagacaagcttccgacttcatcgaggccatcgag
agtgtgcgctccatttgtgaagagtttatgcgccagggcatcaagaactatcccaacggc
tacccatttctgttttgggaacagtacataggtctacgccactggtttctgctgtccatc
agtatcgtccttgcttgcaccttcctggtgtgcgccatcctcctcctcaacccgtggacc
gcaggcgtcattgtttttattttggccatgatgactgtggaactttttggcatcatggga
ttgattggtattaagttgagcgccattcccgtggtcatcctcattgcctccgttggtatt
ggagtggagtttactgtgcacattgcactgggtttcctgactgctatcggggacaggaac
actcgttcagctgtggcaatggagcatatgtttgctcctgtgattgacggcgccatctcc
actctgctgggagtccttatgcttgccggctcagaattcgacttcatcatgagatacttc
tttgctgtgctggccattttgacattattggggatcctgaatggtttggtgctacttcca
gtactgctgtcgctcatgggtccccctactgagtctgtgcctgttaacaacgccaatcag
ttgcaaagtccctcccctgaacccatgccaccacctatgaaccaccacgggtactacact
gggaacatgccgaaagcaccgcgtcaggcattctctgagccctccgaatccgactactat
tctgaaactaccaccacctccggcatcggcgaggaggaatacaagtactgtgacaggagc
ccctacatcacacccccggctcaatctcccacctcccatattttactggaagccagcaaa
aaccccagcttccctaagctaacagtggttaagcctttccacgaaacaggcactaaagga
cagctgagcgagtctgcccagaatgccgtcaactctgtcagttcacaaatcacgcgatgg
gataacaaacacgagtaccaagggccaaagcgacaacatttaccaagtgacagaacccac
tgtcctcacaggactactcagtgtggcccagggccacaaccagggagaaggcagcagcaa
aacaggactacagccccagccaatggcgccggggcattgcagcggcctaacaatgccatc
accatggttacagccacagcttctgtgacagtggcagtgcaccccagtttgccggggtca
tatcagggttacatgcacgaagggtttgaggataccgagtcggactctttcgaggactct
aagagaacttctcaaacatatggaaaaacttcaaattataagacagactctttggaactt
caagatctggaacccacagagaacagccagcatcaatctaaccaggcgctaggtggtgca
tggatccaagcagccaaagattgctag
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