Triplophysa dalaica: 130418819
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Entry
130418819 CDS
T09616
Symbol
cacna1ba
Name
(RefSeq) calcium channel, voltage-dependent, N type, alpha 1B subunit, a isoform X1
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tdw
Triplophysa dalaica
Pathway
tdw04010
MAPK signaling pathway
tdw04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
130418819 (cacna1ba)
04020 Calcium signaling pathway
130418819 (cacna1ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130418819 (cacna1ba)
Ion channels [BR:
tdw04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
130418819 (cacna1ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
130418819
NCBI-ProteinID:
XP_056600924
LinkDB
All DBs
Position
4:complement(18806896..18903760)
Genome browser
AA seq
2341 aa
AA seq
DB search
MARFADVLPTRYGGGGSPAGQGRGACRLPGPPGVQRVYKQTMAQRARTMAIYNPIPVKQN
CLTVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLGLEQHLPALDKTPMS
KRLDDTEPYFIGIFCFEAGIKIIALGFAFHKDSYLRNGWNVMDFVVVLTGILTIVGPDFD
LRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMG
KFHRSCFKNSTGEQVAEFPCGTEAPARMCENDAVCQEYWIGPNYGITNFDNILFAVLTVF
QCITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEK
RQEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKDDSAWYKRKCNNPVLKRA
KKSKNDLINAEECEDHFTDISSVAPQGSPFTRASVKSSKNENSSYFRRKEKRFRFFIRRM
VKAQSFYWSVLCIVGLNTLCVAIVHYDQPDWLTYALYLAEFVFLGLFLIEMSLKMYGLGP
RTYFHSSFNCFDFGVIVGSIFEVIWAAVKPGASFGISVLRALRLLRIFKVTKYWNSLRNL
VVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGLFNFDDETPTTNFDTFPAAILTVFQ
ILTGEDWNAVMYHGIESQGGVHRGMFCSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQEL
TKDEEEQEEAINKKLALQKAKEVKEVSPISAANISITAFIRPNPVAGSRSSSNSSSHSPS
YVCSPAHHYLSKEQQRSLKMMSVWEQRTTQIRKHILASSEALYQEELHPRLTSDLQLRPD
IKTHLDRPLVVEPRCDGPISPGADWDKPQNMQGESGTPEDIDAPIIEPPQYHPPRKHHRH
RERPSNETNENGDMGHGKEGRHHVHHSRSKEHDATRCKEGKNDRSRSSEGGRRHHHQSSV
DEGGGEREHRHHHSHRHNREGNGVVSAGGKSERRSRHKEGSRSGTREGERCSRGENGGNG
GRRRHRPRSSKAQSTLEGEDEQGNGEKEEGKSHSHSSRHMDMGTDSLGVNPPVGNRWCLE
KQEESDNKRNIGQTGGMSTHIPVTITSPPGETTLIPMNSIDSETVPMTEKNLEDLNQSNP
RPILPFSSMFIFSPTNPVRRLCHYIVSLRYFEMCILVVIAMSSIALAAEDPVQANAPRNN
VLKYMDYVFTGVFTFEMVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGAMVAFAFSGTKG
KDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNILIVYILFMFIFAVIAV
QLFKGKFFFCTDESKSLEKDCRGMFLDYKDEVAAQPREWKKYDFHYDNVLWAFLTLFTVS
TGEGWPTVLKHSVDATFEDQGPNPGFRIEMSIFYVVYFVVFPFFFVNIFVALIIITFQEQ
GDKALSECSLEKNERACIDFVINAKPLTRYMPQNQQSFQYRLWKFVVSPPFEYSIMIMIA
LNTVVLMMKFYEAPDSYDAMLKYLNVVFTALFSMECILKIIAFGPLNYLKDAWNVFDFVT
VLGSITDIVVTEINDRMLNLSFLRLFRAARLVKLLRQGYTIRILLWTFVQSFKALPYVCL
LIAMLFFIYAIIGMQVFGNIELNEDTAINHHNNFRTFLQALMLLFRSATGEAWHEIMLSC
LSERSCDVRSTVLGKECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILG
PHHLDEFIRVWAEYDPAACGRIKYLDMYEMLLHMSPPLGLGKKCPPRIAYKRLVKMNMPI
AEDNTVHFTSTLMALIRTALEIKLASGMVAQRLSDAELKKELSTVWQNLSQKTMDLLVTP
HKPNELTVGKVYAALMIFDYYKQNRAKRLQRQQQQQRDQTGPGSQNKVSALLEPILPLTH
MQDQTTNSVDATIPTSTTLNNGRTHLDSTIIGSSSWASEKSKEVHKSKRRPISRGQSEEA
SNANTAQESVEMRNMENSANTPTSANLEGQGRAVSMPKLNAEMQRSHSRHFPGTSLEPIP
DSPMRRSASTFAAQRPQEVNLNDYILEKPVHERQHHHHHHHRCHHRRDKEKKQRSLDRSP
TAQHKATGTAADPVEERVYDRGRSHDRKHHSSSADRQRYYSCDRYGSREHCPSKSAVASC
ATSPTEGQEANLDKQGSGWAKGSPVLLTSGASTPSRGRRQLPQTPLTPRPSVAYRTANSS
PVPFLGSQTGLPPPSPGRLSRGLSEHNALLHSGSSLPAAVSRINSEPFLGPSDHPAGQRN
CPLPESYAVFQEDQSRSPRTVVVPIVAIPPPPQQPFRGVPNGYHFSRGRARQYYPEADDW
C
NT seq
7026 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcttcgcagacgttctcccgacccggtatggaggcggtggctctccagcgggt
caaggcagaggggcatgccggctcccaggccccccgggcgtacagagggtttataagcaa
acaatggcccaaagagcccggacaatggccatatacaacccgataccggtcaaacagaac
tgcctcacagtcaaccgatcccttttcatcttcagcgaagataatataatacggaaatat
gcaaagaaaataacagagtggcctccattcgagtacatgattcttgccaccatcatagca
aactgcatagtactggggttagagcaacatttacctgcgttagacaagacacccatgtca
aaacggctggatgacacagaaccctacttcattggaatattttgtttcgaggccgggatc
aagatcatcgccctaggctttgcttttcataaagactcctatctgcgcaatgggtggaat
gtaatggattttgttgtcgtgttgacggggatactgaccatagtgggcccagactttgat
ttgcggacactcagggcagtgagagtcttgcggccgctcaaactggtttctggaattccc
agtctccaggtggttctgaagtccatcatgaaggcgatggtacctttgcttcagataggt
ctccttctcttttttgccatcctcatgtttgccatcatcggtctagatttctacatgggc
aagtttcaccgttcctgcttcaaaaacagtaccggggagcaggtagctgaattcccctgt
gggacagaagcaccagcgcggatgtgtgagaatgacgccgtttgtcaagaatactggatc
ggtccgaattacggcataactaactttgacaacatcttgttcgctgtgctcactgtcttc
cagtgtatcactatggagggatgggtggacatcctttacaatgccaacgatgcctcaggg
aacacctggaactggctttacttcatccccctcatcatcattggctctttcttcatgctc
aatctggttctgggtgtgctgtcaggggaatttgccaaggagagagagcgtgtggagaaa
cggcaggagttcctgaagctacgcaggcaacagcagatcgagagagagctgactggctac
ctggagtggatctgcaaggcagaggaagtcatgcttgctgaggaagataaaaatgcagag
gagaaggacgacagtgcctggtacaagaggaaatgcaacaacccagtattgaaaagggct
aaaaagagcaaaaatgacctcatcaacgcagaggagtgtgaagatcatttcacagacatc
tcatcagtagctcctcaaggttctccattcacccgtgcgagtgtgaagagcagcaagaac
gagaactcgtcgtatttccggaggaaggagaagaggtttcgcttcttcattcgacgtatg
gtgaaggcccagagcttctactggagcgtactgtgtatcgtgggactgaacacactgtgt
gtggctatagtccactacgaccagcccgactggctcacatatgcgctgtatttggcggag
tttgtgttcctcggtctgtttctaatagagatgagtctgaagatgtatggcctcgggccc
aggacctactttcactcctcatttaactgctttgactttggggtgattgtgggaagcatt
ttcgaggtgatttgggcagcagtaaaaccaggagcatcctttggcatcagtgtgttgcga
gcgttgcgtttgctgaggatatttaaggttaccaagtattggaactctctgagaaatctg
gtggtgtctctgctcaactccatgaagtccatcatcagtcttctgttcctcctgtttctc
ttcattgtggtgtttgctctgctggggatgcagctcttcggtggactgtttaattttgat
gatgaaaccccgactaccaactttgacacgttcccagctgctattctgacagtgtttcag
attctgacgggggaggactggaacgctgtgatgtatcatggaattgaatctcagggcgga
gttcaccggggaatgttctgctccatctactttattgtgctcacgctgtttggaaactac
actctcctgaatgtctttttggccatagctgttgataacctcgctaatgcgcaagaactt
accaaggatgaggaggaacaggaggaggccatcaataagaaactggctctgcagaaagct
aaggaagtgaaggaggtcagccccatttcggctgctaacatttccatcacagcttttata
aggccaaatcctgttgctggttcacgcagctcctccaactccagctctcattctccgagt
tatgtctgctcccctgcacatcactatttgagtaaagaacagcaacgatccctaaaaatg
atgtccgtgtgggagcaacgcaccactcaaatccggaagcacatactggccagcagcgag
gcgttgtaccaggaggagctccacccacgtctgacatccgacctccaacttcgccctgac
atcaaaactcacttagatcggcctctagttgtagaacctcgttgtgatggccccatcagc
cctggggccgactgggacaagccccagaatatgcaaggggaatctggcacaccggaggac
atagacgcccctattattgaacccccgcagtaccacccaccacgcaagcaccaccgtcac
agggagcggccttccaacgagaccaatgagaatggagacatgggacatggcaaagaaggt
aggcatcatgttcatcacagccgcagcaaagagcacgatgcaacgcgatgtaaggagggg
aagaacgacaggagccggagcagtgaggggggacgcagacatcaccaccagagctcggtg
gacgagggaggcggggagagggaacatcgccaccatcactcccacagacataacagggag
ggaaatggagtggtcagcgctgggggcaagagcgaaaggaggtccaggcataaggagggc
tcacgttccggaacgagggaaggggagaggtgttccagaggagagaacggaggtaacgga
gggaggaggaggcacaggccacggagcagtaaagctcagtccacgctggagggagaggat
gaacagggaaatggagagaaagaagagggcaagtctcacagccacagctccagacacatg
gacatgggcacagattcactcggcgtaaaccccccagttggcaacagatggtgccttgag
aaacaagaagaatcagacaacaagcggaacattggtcagactggaggaatgagcacacac
attcctgtaaccatcacatctccacctggggagacaacccttatacccatgaacagtata
gacagtgagactgtacccatgactgagaagaatctggaggatctaaaccagagcaaccct
cgtcccatcctcccctttagctccatgttcatctttagccctaccaacccggtgagacgt
ctgtgccactacattgtgagtctgcgatactttgagatgtgtatcctggtggtcattgct
atgagcagtatagctctggccgctgaggacccagtccaagccaatgctcctcgcaacaac
gtgctgaagtatatggactacgtctttactggcgttttcacatttgagatggtcattaag
atggtggatttgggtttgttgctacatcctggcgcgtactttagagatctgtggaatatt
ctggacttcattgtggtcagcggtgcgatggtggccttcgcattctcagggaccaaagga
aaagacatcagcaccatcaagtccctgagggtgttacgagttttgcgccccttgaagaca
attaaacgtctgccaaaactgaaggccgtgttcgactgtgtggtgaattcgctgaagaac
gtgttgaatatcctcattgtttacatcctgttcatgttcatctttgccgtcattgccgtg
cagctcttcaagggcaagtttttcttctgcacagatgaatccaaaagcttggagaaagac
tgcaggggcatgttcctggattataaggatgaggtggcagctcagccaagagagtggaag
aaatatgacttccactatgacaatgttctgtgggcctttctcacactttttactgtttcg
actggggaaggctggcctacggttttgaagcattctgtagatgccacatttgaggaccaa
ggtcccaatccgggcttccgcattgagatgtccatcttctacgtcgtctactttgtggtc
ttccccttcttctttgtcaacatttttgtggctttgataatcatcacattccaggagcag
ggtgataaagccctttctgaatgcagtctggagaagaatgagagagcctgcatcgacttt
gtcatcaatgccaagccgctgacccgctatatgccccagaaccaacagtccttccaatac
cgcttgtggaagtttgtggtctcgccaccctttgagtactccatcatgatcatgatcgcc
ctcaacaccgtggtcctcatgatgaagttttacgaggcacccgactcttatgacgcaatg
ctgaagtatctcaacgttgtcttcaccgctctgttttcgatggagtgcattctcaagatt
attgctttcggacccttgaattacctgaaagacgcctggaacgtgttcgactttgtgacc
gtgctgggaagcatcactgacatcgtagtcactgagattaatgaccgtatgctgaacctg
agctttctgaggctcttcagagcagcccgacttgtcaaacttctccgtcagggatatacc
attcgcattctcctctggacctttgtccagtcttttaaggccctaccttatgtttgcctt
ttaatcgccatgctgtttttcatctacgccatcattggaatgcaggtgtttggaaacatt
gagctgaatgaggacaccgccatcaatcatcacaacaactttcgcactttcctccaagcg
cttatgctgctgtttaggagcgccactggtgaggcctggcacgagatcatgctgtcctgc
cttagcgagcggagttgtgatgtgcgctctacagttctcgggaaagagtgtggcagcgat
ttcgcctacttttactttgtgtccttcattttcctctgctccttcctgatgttgaacctg
tttgtggctgtcatcatggacaactttgagtatctgacacgtgactcctccatcctgggc
cctcatcacctggatgagtttatccgagtgtgggcggagtatgacccggctgcctgtggc
cgtatcaagtacctcgatatgtatgagatgctgctccacatgtccccacctttaggtttg
ggaaagaaatgtcctccacgaatcgcctacaagcggttggtgaaaatgaacatgcccata
gcggaagacaacactgtgcatttcacatctaccctgatggctctcatccgcaccgccctg
gagatcaaactagcatcaggcatggtggcccagcgtctgtcagacgctgaactgaagaag
gagctctccacagtctggcaaaacctgtctcagaagaccatggacctgctggtcactcca
cacaaacccaatgagcttacagttggaaaggtgtatgcagctcttatgatcttcgactat
tacaagcagaacagagccaaaaggcttcagaggcaacaacagcagcagagagatcagaca
ggacctggatctcagaataaagtcagtgctctcttagagcccattcttcctttaacccac
atgcaagatcagaccacgaacagtgtggacgccaccatacccacctccaccacactcaac
aacggacgcacacatcttgacagcaccattataggatcttcatcgtgggcctcagaaaag
tccaaggaggtccataagtccaaacggcggccaatctcgaggggccagtcagaggaagcc
tcgaatgcaaacactgcccaggaatccgtagaaatgaggaatatggaaaacagtgccaac
acgccaacttctgccaacctcgagggccaaggacgtgcagtatccatgccaaaactcaat
gcagagatgcagaggagtcattcccgtcattttcctggaacctcactggaacccattccg
gattccccaatgagacgctcggcgtccacttttgcagcacagcgccctcaggaggtcaat
ctgaacgactacattttggagaaaccggttcatgaacgacaacaccaccatcaccatcat
cacagatgtcaccatcgcagggacaaagagaagaaacagagatcactggaccggtcgccg
accgctcaacacaaggccacaggcacagcggctgacccagttgaggagagggtttatgac
cggggtcgttctcatgacaggaagcaccattcgtcatcagcggacaggcagcgctattac
tcctgtgatcgctatggcagccgagaacactgtcccagcaagtctgctgtggcaagctgt
gccacctcacccaccgagggccaggaggccaatctcgacaagcagggcagtgggtgggct
aaaggaagcccggtgttgttgacttcaggggcaagcactccgagccgcgggcgcaggcag
ctgccccagacccctcttactcctcgcccctctgtggcctacaggactgccaactcttcc
cctgtgcccttcttgggctctcagactggcctgcctcccccgagtcccggcaggctaagc
cgcgggttgtccgagcacaacgcgctcttacacagcggctccagcttgccggccgctgtc
agtcgcattaactcagaacctttcctaggcccctcggaccaccctgccggccagcgcaac
tgcccgctgcccgaatcgtacgctgtcttccaagaggatcagagccggtctcccaggact
gtagtggtgccgatcgtggctattcctccacctccccaacagccgttccgaggggtgccc
aatggataccacttcagcagaggcagggcacggcagtactacccagaggccgatgactgg
tgctag
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