Triplophysa dalaica: 130418831
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Entry
130418831 CDS
T09616
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
tdw
Triplophysa dalaica
Pathway
tdw04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
130418831
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130418831
03036 Chromosome and associated proteins [BR:
tdw03036
]
130418831
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
130418831
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
130418831
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
130418831
NCBI-ProteinID:
XP_056600943
LinkDB
All DBs
Position
4:complement(9448606..9466421)
Genome browser
AA seq
1737 aa
AA seq
DB search
MSAEVLRPGPVAGAGSKLGELIGKLHEYMESATEGKDEPTLPGHWNGTVAKEYLEMKAKA
HAAEEARGSSTAGLSSLGRSRRKPTVVTKHSGLNESDESSESGAEDLISVHSNDHDNNFL
PKGTVFVLPEPVGNESRDDFRGPEFRSRRVQKQQKDSADRRKGYENERVNCSACGQQVNP
YQRDSVYRHPMLNVLICKSCFKYYMSDDISKDSEGMDEQCRWCAEGGSLIGCDYCSNAFC
KKCVLRNLGRRELSSILEEERKWYCYVCSPEPLIELVLGCDSVLDNLEQAQKPSSVRGKA
KVDRGAPFMMKPGGGPVPSAGLYQRMQQFVDVTSSLNHSFKAIVPSGAGEEERRIGQLRM
FRAVLDDLQVANITLQEALDHELIGTKHRSGVSIETNKSKGKAKRRKSMPSQNSPLTKEL
VLKLTPVPVCTGAIGSTSLSIPPSPERPKTESNITDGELEKCGAEVEDNRVEIEVTIEEE
VVETYCGNGAEEGDNEGDSEGDKTDTKSLSLAEDNKRSPRVKTTPRRRRTTASPAAEHAG
LAEDDSDSDEVPEVLLQTAAAMGNSEEEGLVGSSGDGDEVNQQVRKQRLFGLVKTTPPDR
SSRKRNLKDRSSSSSSSSSASSRRGSQDQGSAARMTRGRARKVARVTEQGGSSSSEVGGQ
ELDSGQSSDSDDQRIKPLTEGVTLLGSGNFQQSSGDEMDIQPASSLSVDDDDLENRIAKK
ILLAQIRANLSSSSELDSNSDEQSESEKGEQKSKRGTPKTTTDEEYKSSDSSGSQSGSRH
RHKLLRHGLNLPEAEAQGLKQGEKNKNKREKQNQDLLHDNASTDESSDSALSEELSESEN
EETGLQTPSHTESTTNSPDEPTTPDNDVSIIAEECLRGTPHGRRQIRRLLEVDQLAQETQ
SALKEEEERRRRLAEREKQRLENERREREEADSEVILVSEKPAHSFAPLVLEQDDITHKP
VVEVQMHFLRKLKSHQRDGVRFMWDSCCESVQTVKSSPGSGCILAHCMGLGKTLQVIVFL
HTVLFCKRLPLKRALVVCPLNTVLNWRSEFDKWQRGLRPHTLRVTELATVKSLAVRLELL
NDWFQNGGVMIIGYEAFRNLTYNTVNNIQHREAIHSLLLNPGPDLVVCDEGHILRNAESS
ISKAMRAIRTRRRIILTGTPLQNNLAEYHCMVNFIKENLLGSLSEFRNRFINPIQNGQCA
DSTPADVRVMKNRSHVLHELLSGFIQRRDYFVLKSCLPPKCEYVLSVRMTPFQCQLYAHY
LQKYTGKGVNRLFQDLHILSLIWTHPWCLKLAHLNKNKRKEEEPSTDFTALCASVGKHSG
EFNHSQSKDAKTTDVEGEAINKAEKERDTDSVSRPDVINSSTMEIPGLSGVNGPCAEWYL
PFLKESDAKVLEHSGKLQLLLEILHWAEELEDKVLVFSQSLICLDLIENFLEYANETNGK
EECPYKGKKSWVKNKDYYRLDGTTSACARKRWAQEFNNRKNPRGRLFLISTRAGSLGINL
VAANRVVVFDACWNPSYDIQSIFRVYRFGQNKPVSVYRFLAQGTMEQKIYERQVAKQSLS
SRVLDHQQIQRHFTHSELNELYRFQPDLQPSKHTQAPLDEVLVLLLQNCGHLIVSYHQHD
SLLDHREEEELSEEERRVAWDEYRAEKRASVVISNLPPLMQLSKNANQELKQMHYHQNML
AFQNLTSTTTLPVKQGSAPPFAARRPRDLATFRPEQPGGVYTGLKTNAGPDSSLSQN
NT seq
5214 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccgaggtcctcagacccggcccggtggctggcgcaggcagtaaactcggtgag
cttattggtaaactccatgagtacatggaaagtgcaacagaaggcaaggatgaacctact
ttacccggacattggaatggaactgtggccaaagagtacctggagatgaaagccaaagcc
catgctgctgaggaggcccgtggctcctcgacagcaggactgtcatccttaggtcgttca
agaaggaaaccgactgttgtcacaaaacacagtgggttgaatgagtccgatgaatcttct
gagagtggagcagaggatttgatatctgttcactccaatgaccatgacaacaacttcctg
cccaaaggaacggtgtttgtgctgccggagcctgtgggaaatgaaagccgcgatgatttt
cgtggcccggaatttcgcagcagacgagttcaaaagcagcaaaaagattctgctgacaga
cggaaaggatacgaaaatgagagggtaaactgctctgcctgcggtcagcaggtaaatcct
taccagcgtgactcggtctataggcaccctatgcttaacgtgctgatctgcaagagttgt
tttaagtattatatgagtgacgacatcagcaaggattcggaggggatggatgagcaatgc
aggtggtgtgcagaaggaggcagtctgattgggtgcgattactgcagtaatgccttctgt
aagaaatgtgtgctgcgaaacctgggcaggagggagctgtccagcatcctagaagaagaa
aggaagtggtactgttatgtgtgcagtccagagccattgattgaactagtgttgggctgc
gactcggttctggacaacttagaacaggctcaaaaaccaagctcagttcgaggaaaagca
aaggttgatcgcggagcaccctttatgatgaagccaggaggaggcccggtgccctctgca
ggcctttaccaacgaatgcaacagtttgtagacgttacttcatcgctgaaccactctttc
aaggcaattgttccaagtggagcaggggaggaagaaaggagaattgggcagctaaggatg
tttcgtgctgtcttggatgatctacaagttgccaacattacattacaggaagccctggac
catgagctgatcggtaccaaacatcgcagcggtgtttctattgaaactaataagtctaaa
gggaaggcaaaacggagaaagtcgatgccatctcagaactctcctctcactaaagagcta
gtgctcaaactcactcctgtaccagtctgcacaggagctatcggttccacctctctttcc
atcccaccatcacctgaaagaccgaagacagagagcaacataacagatggagaactggag
aaatgtggggcagaggtggaggacaatagggtggagatcgaggtaacgattgaggaagaa
gtggttgagacttactgtggtaatggtgctgaagagggcgacaatgagggtgacagtgaa
ggagacaagactgacacaaaaagtttgtcattagcagaggacaataaacgttccccacgt
gtgaaaaccacgccgcgccgtcggcgcaccactgcgagcccagcggctgagcatgctggt
ctagccgaagatgattctgattctgatgaggtgcctgaagtgcttcttcagaccgctgct
gctatggggaacagtgaggaggagggtctggtgggtagcagcggggacggggatgaggta
aaccaacaagtcaggaagcagcggctctttgggctggtgaaaaccacgcctccggacaga
agctctcgtaagcgaaacctcaaagatagatcatcatcatcgtcttcatcctcttctgct
tcttcgaggaggggctctcaggaccaggggtcagcggccagaatgaccaggggaagagct
cgcaaagtcgccagggtgacagaacaaggtgggagttcctcaagtgaagttgggggacag
gaattggatagcgggcaaagcagcgactcggatgatcagaggatcaaaccgttgaccgag
ggcgtcacgttgcttgggtctggaaattttcagcagtcttccggggatgagatggacatc
cagccggcttcttcattgtctgtggacgatgatgatttagaaaatagaattgcaaaaaag
atcctgctggctcaaataagagctaatctctcctcatcttctgagctggacagcaactct
gatgaacagtcagagagcgagaaaggagagcaaaagagtaagagagggacgcccaagacc
acgactgatgaagaatacaaaagctcagattccagtggttcacagtcagggtcgcggcat
cgacacaaactgctgagacatggtcttaacttacctgaggcagaagcacaaggacttaag
caaggggaaaagaacaaaaacaaaagagaaaaacaaaatcaagatctattgcatgataat
gcgagcacagatgaatcgagcgactctgccctaagtgaggaactcagtgagtcagagaat
gaggaaacggggttacaaacccccagtcatactgagagtacgacaaacagtcctgatgag
cccaccactcctgataacgacgtttcgataatcgctgaggaatgtttgaggggcacccct
cacggcaggaggcagatcaggcgacttctggaggtggatcagctggcacaggagacccag
agcgctctgaaggaagaagaggagcgcagaagaagattagcagagagagaaaaacaaagg
ctggaaaacgagaggcgagaacgagaagaagcagactctgaggtcatcctcgtatctgag
aaaccagctcatagctttgccccactggttttagagcaagatgatataacgcacaagcct
gtggtggaggttcaaatgcactttctgagaaaactcaaatcacatcagagagatggtgtg
cggtttatgtgggactcgtgttgtgagtctgttcagactgtgaagtcatctccgggttct
ggctgtatcctggcgcactgcatgggactgggcaagaccttacaggttattgtgttcctt
cacacagtgttgttttgtaaacggttgcctctgaagagggctttggttgtgtgtcctctc
aacacggtgctgaactggaggagcgagtttgacaaatggcagaggggcttgagaccccac
actttgagggttacagagctggccacagtaaagtctttagctgtccgtcttgagctgttg
aacgactggtttcagaatggtggcgtcatgatcattggttatgaagctttccggaatctc
acatacaatactgtgaataacatccaacatagagaggccatccactctttgctgctgaac
cctggtcctgatttggtggtgtgtgatgaaggtcatatccttaggaatgcggaatccagc
atctcaaaggccatgcgtgctatccgcacgcgtagacgaatcatattgactggcacaccg
cttcagaacaaccttgctgaatatcactgtatggtaaacttcattaaagagaacctgctg
ggttctttaagtgaattccggaaccgtttcattaatccaatccagaatggccagtgtgca
gactccacccctgctgatgtcagagtcatgaagaaccggtcacatgtcctccatgagctg
ctgtcaggatttatacagaggcgagactactttgttttaaagtcctgtctgccacccaag
tgtgagtatgtgctgtccgtcaggatgacacctttccagtgtcagttatacgcacactat
ctgcagaaatacacaggaaaaggagtgaaccgtttgtttcaggaccttcatattctgagt
ttgatatggacccatccctggtgtcttaaacttgctcatctgaacaaaaataagaggaaa
gaggaagagccttctacagacttcacggcactgtgtgcgagtgtagggaaacattctgga
gaatttaatcattctcaaagtaaagacgcaaagactacagatgtagagggggaggcaata
aataaggctgaaaaagagagagatactgattcagtcagtcggccagatgtcattaactca
tccacaatggaaattccagggttaagtggtgtaaatgggccatgtgcagaatggtatctg
ccatttctaaaagaatccgatgcaaaagtcctcgagcattctgggaaattacagttgcta
ctggagattttacactgggcagaggaactggaggacaaagtgctggtttttagtcaatct
ctaatctgtctggatctcattgagaatttcctggaatatgccaatgagaccaacgggaaa
gaagagtgcccatacaaaggaaagaaatcatgggtgaagaataaagattattatcgtttg
gatgggacaaccagcgcctgtgctcgcaagagatgggctcaagagttcaacaaccggaaa
aacccaagagggagattgtttctgatctccactcgtgctggatctcttgggatcaatttg
gtggctgcaaacagggttgtggtgtttgatgcatgctggaatccgtcatatgatatccag
agcatcttcagagtctatcgttttggacagaacaaacctgtatcggtgtaccgttttctg
gcccagggaaccatggaacagaaaatttatgagcggcaggttgctaagcagtctttgtcc
tcccgtgttctggaccaccagcagattcagagacacttcacacacagcgagctgaatgag
ctctaccgctttcagccagaccttcaacccagcaaacacacacaagcacctttggatgaa
gtgttggtactacttctgcagaattgtgggcatctcatagtgagttatcatcagcatgac
tcattgttggaccaccgggaggaagaggagctcagtgaggaagagcgcagagtagcctgg
gatgaataccgtgcagagaagagggcatctgtagtgatctccaatctacctccgctaatg
cagctcagcaagaacgccaaccaggagttaaagcaaatgcattatcatcagaacatgctg
gcttttcaaaaccttaccagtacaacaacgcttccagtcaaacaaggcagtgctccaccc
ttcgctgcacggcgtcctcgtgaccttgcaaccttccgacctgagcaacctggaggagtt
tacacagggttaaaaacaaatgccggacctgactcctcactatcccaaaactga
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integrated database retrieval system
