Triplophysa dalaica: 130418897
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Entry
130418897 CDS
T09616
Symbol
si:dkeyp-117b8.4
Name
(RefSeq) zinc finger BED domain-containing protein 4 isoform X1
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130418897 (si:dkeyp-117b8.4)
04121 Ubiquitin system [BR:
tdw04121
]
130418897 (si:dkeyp-117b8.4)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
130418897 (si:dkeyp-117b8.4)
Ubiquitin system [BR:
tdw04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
130418897 (si:dkeyp-117b8.4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
Dimer_Tnp_hAT
Pollen_Ole_e_1
Motif
Other DBs
NCBI-GeneID:
130418897
NCBI-ProteinID:
XP_056601072
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All DBs
Position
4:complement(5356022..5361882)
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AA seq
983 aa
AA seq
DB search
MDNMKEEELESQVKIQARYCSLAWKYFIKNENNGTVYCKLCKSTFKFSSNTANMIKHLRV
KHRLHVPAVASGGERLCMEEGIAQGTTDMDLPPQRYPGNLGAPTFRRRMERFLPFSDRRT
SKVWNHYTQLSLHRVECNHCKRQLSFHNSTTSMREHLGRKHSIRDGAVPPHNIADISTPN
ALHPHIGQSGVHGNRLTACNAASSAVFQPGVPVAVKEEQQEVLLPETGETKPARTTCAPD
CAGGSSTSTSNALPHQDTDMNCLMYNFPSGEMNSSSGTSGNRSGTKGCSNKRAEVLTDLI
LEMVFKDLQPLSVVEEKGFRLLLGCLEPNYPVPSPSLLGSLLWHRYHILKQVLQQHLQTS
LASHCLNVCIEHWRSVEGCGVGGDGRFYVMVSAHFVDSNWRLARCVLETRPIPEFKENGD
QRGHARFADTLRAVLSEFQLPENYVFCVVHDTPFGTELRGQDNMTIESEYQQEFSGPSHP
HPSALPEGWTPLLCAGQALKLCVQEGLCVETVRQALADARAIVLHFQHNVNAATALSQKA
EAVNKESACLVLNDPGRWTTAIEMCESLLELKWVISSVLEEQKVASNLADHQWRLIHELV
PVLKTVRIAASFLSEDINGPISALMPCLQGVSRLLGQKIAECSCPVVRGVMERISAGMDK
CWSMSDEEALLDSPAVLSSFLDPRFKELRFLSPHARSKLHDKVKELLSVQAYANKEGRNG
ERIQSIEMEEPVDEPREQADFGLDDPLPMPAMASLDSPESCGSAEEGDIFELPPSEPSVA
VSSPEQANDGMLEVGSPLKNINERKRPSSGTRATPPLREDLPITSRIRMSPLPQSMYDIL
LGEDPTERMPEIHQQLENYIAEPLCRRSLSPLQWWRNKEHRFPAVARLARKYLSIPATAV
SADRAFAPRESPVTQRRATLGSKHLDHILFLHQNTEYVDQLKVGLSGRETDQRNSVGGNQ
SRDNLYQTLVSYESKIRTSEEEP
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatgaaggaagaggagctggaaagccaagtgaagatacaggcccgatattgc
tccctagcctggaagtactttattaaaaacgagaacaatggcactgtgtactgcaagctg
tgcaagtcgacttttaagttctcttcaaataccgcaaacatgatcaaacacctgagagtg
aaacatcgactccacgtccctgctgtcgccagcggtggtgaaaggctttgtatggaggag
gggatagcgcaaggcaccaccgacatggatctcccacctcaaaggtatcctggtaatctc
ggcgcgccaacctttaggagaagaatggagcggttcctgccgttttctgatcgccgcacg
tcaaaagtgtggaaccactacactcaactaagtctgcatcgcgtggagtgcaaccactgt
aagaggcagctttcctttcacaacagcaccacatccatgagagaacacttgggacggaaa
cacagtatccgggatggagctgtgccgcctcacaacatcgcagacatctctacccctaat
gcattacatcctcacataggtcagagcggtgtacatggcaacagactaacagcatgtaat
gccgcaagcagtgctgtctttcagccaggggtacccgttgctgtcaaagaggagcagcaa
gaggtgctgctacctgagacgggggaaaccaaacctgctcggaccacatgtgcccccgat
tgtgcaggtggaagcagcacctctacctcgaatgcccttccccaccaagatacggatatg
aactgcctgatgtacaattttccttcaggggagatgaacagcagttcgggaactagcggc
aaccgtagtggcacaaaaggctgcagtaacaagcgagcagaggtgttgacggatcttatc
ttagagatggtgttcaaagaccttcaaccattgtcagtggttgaagaaaagggattcaga
ctcttactcggttgcttagagcccaactatcccgtgccttctccgtccctgcttggcagc
ttactttggcaccgctaccatattctcaaacaagtactgcaacagcatcttcagactagt
ctcgcttctcattgtctcaatgtctgcatcgagcattggcgttctgtcgaaggatgtggg
gtcggaggggatgggcggttctatgttatggtcagcgcacattttgtagactctaactgg
cgcctggcacgttgcgtgctggagacgcgaccgataccagaattcaaagaaaatggagat
caaagaggccatgcaaggtttgccgacaccttaagagctgttctatccgagttccaactt
cctgagaattatgtcttttgcgtcgtccacgacactccctttggaacggagttgaggggg
caagataatatgaccatcgagtcggaatatcaacaagaattttcaggacccagccatcca
catcccagtgctcttccggaaggatggacacctcttctttgtgcaggacaggccctgaaa
ctgtgtgtccaggaaggactttgtgtcgagactgtccgacaagctcttgcagatgcacgc
gccatcgtcttgcattttcagcataatgtgaatgctgcaacagcactgagccagaaagcc
gaggctgttaataaagaatctgcatgcctggtactgaacgacccgggacgttggaccacc
gccattgagatgtgcgagagtctcctggaactcaaatgggtaataagctcagtattagag
gagcaaaaagtagcatcaaacttagcagatcatcagtggcgtctcatacacgaactggtc
cccgtgcttaaaaccgtccgtattgcagcatcatttttgagcgaggacatcaatggcccc
atttctgccctgatgccgtgtcttcaaggagtgtcccggctccttggacagaaaatcgcc
gagtgcagctgtccggtggtgagaggagtcatggagagaattagtgccggtatggacaaa
tgctggagtatgagtgacgaagaggctcttttggacagcccagctgtgctgtcttcattt
ctggacccacgttttaaagagttgcggtttctcagcccgcatgcccgcagcaagctgcat
gacaaggtaaaagaactgttgtcggtccaagcttacgcaaataaagaaggaaggaacggg
gagaggatccaaagcatagaaatggaggaacccgtggatgaaccaagagaacaagccgat
ttcggtttagatgatcccttgccaatgcctgccatggcttctttggattctcctgaatcg
tgtggctccgcagaggagggcgacatctttgagctgccgccaagcgagccttctgttgcg
gtgtcatctccggaacaggcaaacgacggcatgcttgaggtcggctcacctctcaaaaac
atcaacgaacgtaaaagaccttctagcggcacaagagcaacgccgccgctgagagaagat
ttaccgataacttcacgcatacggatgagtcctctcccacagagcatgtatgatattctt
ctaggagaggacccaacagaacgaatgcccgaaattcaccagcagctggaaaattatata
gcggagcccctctgcagacgcagcctttcccctcttcaatggtggcgcaacaaagaacat
cgcttcccagctgtggctagactggcacgaaaatatctgtccatacctgcaactgctgtt
tcggccgatcgggcctttgccccaagggaatctccagtgacccaaagaagggccaccttg
ggttctaaacaccttgaccatattttatttctccatcagaacactgaatatgtggatcag
ctaaaggttggcctctctggacgagaaactgaccagaggaacagtgtcggtgggaatcag
agcagagacaatctttaccagactcttgtgtcatatgaaagtaagattcggacatctgag
gaggagccgtga
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