Triplophysa dalaica: 130418938
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Entry
130418938 CDS
T09616
Symbol
tbc1d8b
Name
(RefSeq) TBC1 domain family member 8B isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130418938 (tbc1d8b)
Membrane trafficking [BR:
tdw04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
130418938 (tbc1d8b)
Endosome - Golgi transport
Rab GTPases and associated proteins
130418938 (tbc1d8b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_7
FGGY_N
Motif
Other DBs
NCBI-GeneID:
130418938
NCBI-ProteinID:
XP_056601130
LinkDB
All DBs
Position
4:9180388..9199377
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AA seq
1170 aa
AA seq
DB search
MRLRCSQCHARGHVSLKTDGSMWLKPEEVLLKNALKLWVTEKSNDYFVLQRRRGYGEDSG
GLTGLLVGTLDTVFDSTAKVAPFRILHQTPDSQVYWNIACGASLEEISQHWDWLQQNIIR
TLSVFDSGDDITSFVQGKIRGLIAEEGKSACDEEDPERFREVVLRFERLFGLPQREKLVT
YYSCSYWRGRVPNQGWIYLSTNFLCFYSYMLGNEVKLVFPWDEVSRLERTSNVLLAESIR
VRVRGEDHFFSMFMRLQQTYLIMQQLADYAVVRFFDKEMFHAEHPLSNPLHITQRALEKH
ARNQSFRSFFRLPQEENLCEVYESFLWIPFGHMNVLGKICVSENYLCFASQDGSQCHLII
PLWEVFSVELPDRSTRALTMCMRGKRALRFSEVRDYERLAATIRRKCGTAGSPQHSFMSQ
DEEGVMVGQSQAVSTEALMNVFHPHNAENLDPKMLKERMKEQSWQIHFAEYGRGTGMFCT
KKTRDLIVRGVPETLRGELWMLFSGAVHDMTSNPGYYGRLLEECMGSSSLACDEIERDLH
RSLPEHPAFQSDTGISALRRVLTAYAHRNPKIGYCQAMNILTSVLLLYAKEEEAFWLLVA
VCERMLPDYFNRRIIGALVDQAVFEELIREHLTQLTEHMTDLSFFSSVSLSWFLTLFISV
LPIESAVNVVDCFFYDGIKAILQLGLAVLDYNMDNLLCCHDDAEAVTILNRFFDNVTNKD
SPLPATVQQASATANDKSIQKVDISDLIKEAYEKYGDIRTEEVENMRKRNKLYVIQTLED
TTKQNVLRVVAQDVKCSAAQLDELYMLFKRQHFVSCYWSVSSPVLHNHDPSLPYLDQYQL
DQSQFSSLFNLLQPWTTDTHVRSLTRSAFHILDENGDGLVNFKELICGLDILYNRSFTEK
LKFLFKLHLQSGTQEHTILKSSTFIPPAEDHSFSTRLSDLTEDGVIRKCPEKGRAKVDLQ
EYLKQWQEDLQRREENIKDLPRINQVQFIGLTKTLYGVFHGDEEEESLYRAVARVTSLLL
RMEEVGRKLQESSLQKTTQSTPASSQSTAQEPEVSPTTPISADIPAENTREPPFSQHETA
PSHSDITPNSTSRPSTPTSSPTGTSSPALDTPTDTPTSPSAVRDGDWSFSFEQVLASLLN
EPSVVRFFERAVDADALIAQAHKNQLKDKH
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgcgcttgagatgttcgcagtgtcatgcgagaggacacgtatccctgaaaacagacggc
agcatgtggctcaaacccgaagaagtgctcctgaaaaacgcgctgaaattatgggtgacg
gaaaaatccaacgattactttgtgctgcagcgcagacgcggatacggagaggacagcgga
ggattgacaggcttgttggttggcactttagacaccgttttcgactccacagccaaagtg
gccccgttccgcattttgcaccagacgcccgactctcaggtgtactggaacatcgcctgc
ggagcatcattagaggagatctcacagcattgggactggctgcagcagaacatcatcaga
actctctcggtgtttgactctggtgatgacatcaccagctttgtccagggaaagataagg
ggtctgatagcagaagagggcaaatccgcatgtgacgaggaggatccagaacggttccgg
gaggtagtgctacgttttgagcgtctgtttggtttgcctcaaagagaaaagctagtgacg
tattactcctgcagctactggagaggacgagtcccaaaccagggctggatctacctcagc
actaacttcctgtgtttttactcttatatgctgggaaatgaagtaaaactggtgtttccc
tgggatgaggtgagccgactggaacgcacgtcaaacgtgttgctggcagagagcatccgc
gtgcgtgtgcgtggagaggatcatttcttctcgatgttcatgcgactccagcagacgtac
ttgatcatgcagcagctggccgactacgcagttgtacggttcttcgacaaggaaatgttt
catgcagagcatccactgtccaaccctctacacatcacacagagggctttagaaaaacat
gcgcggaaccagtcattccgatcatttttccggttgcctcaggaagaaaacctctgcgaa
gtgtacgagagttttctctggattccattcggccacatgaacgttcttggaaaaatctgc
gtgtccgagaactatctgtgcttcgccagtcaggacgggtcacagtgtcatctcatcata
cctttatgggaggtatttagtgtagagctgccggatcgcagtactcgtgctttgactatg
tgtatgcgtggcaagagagctttgcgattttcagaagtacgagattatgaacgccttgcc
gccacaatccgcaggaagtgtgggacggcgggaagcccccagcattcctttatgagtcag
gatgaggagggtgtgatggtggggcagagtcaagccgtgagcactgaagcgctcatgaat
gtctttcatccgcacaatgccgaaaaccttgaccccaaaatgctgaaggagcggatgaag
gagcagtcatggcagatccactttgctgaatacggtcgtggaactggaatgttctgcacc
aaaaaaacccgtgatctcattgtgcgaggagttccagagacactgcgaggagaactgtgg
atgctcttctcaggtgctgtacatgacatgacctctaaccccgggtactacggccggctg
ctggaggagtgtatgggcagcagctctctggcatgtgatgagattgagcgagatctgcat
cgctctcttcctgagcacccagcattccagagcgacacaggaatctcggccctgcgccga
gtcttgactgcctatgcgcaccgaaaccctaaaatcggttactgccaggcgatgaatatc
ttgacgtcagtgctgttgctgtatgctaaagaggaagaggctttctggctgctggtggct
gtgtgtgaacgaatgctcccagattacttcaaccgcagaatcatcggagcgctggtggac
caggccgtgttcgaggagctgatccgtgagcacctaacccagctgaccgagcacatgaca
gatctttcgttcttctcatcggtgtcgttgtcatggttcctgacactcttcataagtgtg
ctgccaatagagagcgcggtgaatgtggtggactgtttcttttacgacggaatcaaagcc
atacttcaactcggccttgctgtcctcgactacaatatggacaacctgctgtgttgccat
gacgacgcagaagctgtcaccatcctcaacaggttttttgacaatgtcacaaataaagac
agtccccttccagctaccgtgcagcaggcgtctgcaacagccaatgacaaatcaatacaa
aaggtggacataagtgatcttatcaaagaggcatatgagaaatatggagacatccggaca
gaggaagttgaaaacatgcggaaaagaaacaagctgtatgtcattcagacccttgaagac
acaacaaaacaaaatgttctacgtgttgttgctcaagatgtaaaatgcagtgctgctcag
ctggatgaactgtacatgctttttaagaggcaacactttgtaagctgctactggtcagtg
tctagtccagtcctacacaaccatgaccccagcctgccatatctggatcagtaccaactg
gatcagtcccagtttagcagtctgtttaacctgctgcagccgtggaccacagacacacat
gtgcgctcgttgacacgatctgcctttcatattctggatgagaacggagacggactggtg
aacttcaaagaattaatatgcggtctggatatcttatacaacagatcgttcacagaaaag
ctgaagtttctgttcaaactgcatcttcagtcaggaacacaagaacatacgattttaaag
tcgtctacattcattcctccggccgaagatcactctttctccactcgtctttctgacttg
acagaggatggagtgatcaggaaatgtccggagaaaggtcgcgctaaagtcgacctgcag
gaatatctgaaacagtggcaggaagacttgcagcgcagggaagagaatattaaagatctg
cccagaattaaccaggtgcagtttatcggtctgacgaaaactctatacggcgtgtttcac
ggtgacgaggaagaggagagcttatatcgcgccgtggcacgagttaccagcctcttgttg
cgcatggaggaggtgggacgcaagctacaggagagcagcctgcaaaaaacaactcaaagt
acacccgccagctcccaaagcacagctcaggagcccgaggtctcccccacaacacccatc
agcgctgacatacccgccgaaaacactcgcgagcctccgttcagtcagcacgaaactgcc
ccgtctcactcagacattacccctaactcaacctcacgcccttctacccccaccagcagt
cctaccggaaccagcagccccgccttggacacgcccacagacacgcccacttcgcccagt
gctgtcagagacggagactggagtttttcttttgagcaggttctggcgtccctcctcaac
gaaccgtctgttgttcgcttttttgaacgggctgtggacgcagacgctctgattgcacaa
gcgcacaaaaaccagcttaaagacaaacactaa
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