Triplophysa dalaica: 130418962
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Entry
130418962 CDS
T09616
Symbol
sox6
Name
(RefSeq) transcription factor SOX-6 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130418962 (sox6)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130418962 (sox6)
BRITE hierarchy
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
130418962
NCBI-ProteinID:
XP_056601176
EnsemblRapid:
ENSTDLG00000003825
LinkDB
All DBs
Position
1:complement(22292178..22439005)
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AA seq
813 aa
AA seq
DB search
MLNMEGFLRSSFLLSRIMSSKQATSPFTSSPDDGEDGVNQEHMSWEKEENSELLAAPQLP
LHNLLHNKPPPEELQPISSSMPPESDWDTLMSAQQRMESDSNKVCSLYSFRNNSTSPHKP
EEGARERGDLLSSSAFGTPERRKGSLADVVDTLKQKKLEEMTKTEQDGGNGSLRRQITAR
SPKQSRVCALSQTTESSCMEKLLSKDWKEKMERLNTGELLGEIKGTPESLAEKERQLSTM
ITQLISLREQLLAAHDEQKKLAASQMEKQRQQMELARQQQEQIARQQQQLLQQQHKINLL
QQQIQQVQGHMPPLMIPIFPHDQRTLAAAAAAQQGFLFPPSMSYKPGDNYPVQFIPSTMA
AAAASGLNPLQLQQLYAAQLASMQVSPGAKMPPLPQPPNSGGPISPSGLKNEKRACTPLT
QIKEEGTQPLNLSARPKTADLVKSPTSPTQSLFPGSKSSPNSMSKSGGIPSPIGGISRGS
SLDILSSLNSTALFGDQDAVMKAIQEARKMREQIQREQLLHHQQGMDAKLSALTGMSLNN
CRVDKERSHYETFSHLGKLGEDGKIGHHRVIDLTRPEDFEGGASSAEARVYREPRGRNNN
EPHIKRPMNAFMVWAKDERRKILQAFPDMHNSNISKILGSRWKSMTNQEKQPFYEEQARL
SKIHLEKYPNYKYKPRPKRTCIIDGKKLRISEYKQMMRSRRQEMRQFFTVGQQPQTQIPI
TTSAGVVYPGAITMATTTPSPHMTSDCSSASASPDPTIPVIQSTFNMKMEPGTMVPNTPV
NGEDEMDMYEDFEDEPKSDYSSENETQEPVIAN
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacatggagggctttctgcgtagcagctttttactgagcagaattatgtcttcc
aagcaagccacctctccgttcacctcgagccctgacgatggagaggacggagtgaatcag
gagcatatgtcctgggaaaaggaggagaactcggagttgctggccgctcctcagctgccc
ctgcacaatctgctccacaacaaacctcccccggaggagctccagccaatcagcagcagc
atgccgcccgaatccgactgggacaccctgatgtcggcccagcagcgcatggaatcggac
agcaataaagtatgttccttgtactccttccggaataactctacctctccacacaagcca
gaggagggggccagggagcgcggggacctgctgagcagctcagccttcggaacgccagag
cgtcgcaaaggaagcctggccgatgttgtggacacactgaagcagaagaaactagaggag
atgacgaagacagaacaagacggaggaaacgggagtttaaggagacaaatcacagccagg
tctcctaaacagagccgtgtttgtgccctttctcaaacaacagaatcctcttgcatggag
aaactcctatctaaagactggaaagagaagatggagcgactaaacacaggcgaactgtta
ggagaaatcaaaggaactccagaaagtcttgcagaaaaggaacgacagctctccaccatg
atcacccagctcatcagtctgagagagcagctcttggctgcacatgatgagcagaagaaa
ctggccgcctcacaaatggagaaacagcggcagcaaatggagctggcgcgccaacagcag
gagcagatcgccagacaacagcagcaacttctgcagcaacagcacaaaatcaatctcctc
cagcagcagatccagcaggtccagggtcacatgcctccactcatgatccccatttttcca
cacgaccagcgcactctggcagcagccgccgcggcccagcagggcttcctcttccctcca
agcatgtcctacaagcccggtgataactacccagtgcagttcattccatccacaatggca
gctgctgccgcgtcaggactcaaccctctccagctccagcaactctacgccgcccagctg
gccagcatgcaggtctctccaggagccaagatgcccccgctgcctcaaccccctaactct
ggtgggcccatctccccctctggcttgaagaatgagaagagagcttgcacccccctcact
caaataaaggaggagggaacacagcctcttaacctctccgcccgacccaaaacagctgat
ctggtcaaatctcccacttccccaacacaaagtctcttcccaggcagcaagagcagcccg
aacagtatgtctaagagcggaggaatccccagccccatcggaggaataagtcgcggctca
tctctggatatcctgtccagcctgaactcaacagcattgtttggagatcaggacgcggtg
atgaaggccatccaggaggcgaggaagatgagagagcagatacagagagagcagctgctg
catcatcagcaaggaatggatgccaagctctctgccctcaccggcatgagtctgaacaac
tgcagggttgataaggagaggtctcattatgaaacctttagtcacttgggtaaactaggc
gaggatggaaagatcggtcatcacagggtcattgacctcaccagaccagaggattttgaa
ggaggcgccagctctgccgaggcacgggtctacagggaaccccggggacggaacaacaac
gaacctcacatcaaacggcccatgaacgcattcatggtgtgggccaaagacgagcgccgc
aaaatcctccaggccttcccagacatgcacaactccaacatcagcaaaatcttggggtct
cgctggaagtccatgacaaaccaggagaaacagccgttctatgaggaacaggcgcgcctc
agcaagattcacctggagaagtaccccaactacaagtacaagccccggcccaagcgcacc
tgcatcatcgacgggaagaagctgcgcatcagcgagtacaagcagatgatgaggtcgagg
agacaggagatgaggcagttcttcactgtggggcagcagccacagacgcagatccccatc
accaccagtgcaggtgtcgtctatcctggtgccataaccatggccaccaccacgccctcc
cctcacatgacatcagactgctccagcgcttcagccagccccgaccccaccatccctgtc
atccagagcaccttcaacatgaagatggaacccggcaccatggtgcccaacaccccggtg
aacggcgaggacgagatggacatgtacgaggactttgaggacgagcccaaatcggactac
agtagtgaaaatgagacacaagagcccgtcattgccaactga
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