Triplophysa dalaica: 130418979
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Entry
130418979 CDS
T09616
Symbol
snapc4
Name
(RefSeq) snRNA-activating protein complex subunit 4
KO
K09453
snRNA-activating protein complex subunit 4
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130418979 (snapc4)
03021 Transcription machinery [BR:
tdw03021
]
130418979 (snapc4)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
130418979 (snapc4)
Transcription machinery [BR:
tdw03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
snRNA-activating protein complex (SNAPc)
130418979 (snapc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
SLIDE
Motif
Other DBs
NCBI-GeneID:
130418979
NCBI-ProteinID:
XP_056601270
LinkDB
All DBs
Position
4:8096280..8128668
Genome browser
AA seq
1406 aa
AA seq
DB search
MVEKSTCPPFKGSTFAIMASNKLLAERDKIQEEILALENSLLADNNNITDVLQSDSGSDD
ESDGSGPAVVGVELDDLVAARHRIQREIEEIENTLGVNAELVDILTESEQDSDSSNEDSD
NVELDLPQNVETCLQMNLVYQEVLKEKLDELEKLLRENREQQKEIEDQFSGPSTSCSSSQ
GLSSQKLFLGYFMKPYFKDKLTSLGPPANEETKERMSHGTRSIDELKIKRWEVWQKALLT
NAVAADTLKRMLQPKLSKLDYLNSKMSKAEDEEKEVLKKQMHLIDKDIADISAMREEQLS
GGRNDDHDWEKISNIDFEGLRHADDLKRFWQNYLHPCINKTVWKQEEIDELRKIVQEYNC
CHWNRIAEALGTNRTAFMCFQTYQRYISKTFRRKEWTKEEDQILRDLVGKMRIGNFIPYM
QMSFFMVGRDSSQLTYRWTSVLDPSIKKGPWSKEEDQLLRNAVAKYGMKEWGKIRVEVPG
RTDGACRDRYLDCLRENVKKGPWSPEEVELLKQKVEKYGVGKWTKIASEIPNRVDCQCLN
KWKQLNLAALGKKRVRQPKTVQQKAKRRKVIHHKIKPKIEVTSSSEDETQRKIEYMDSDA
EPEVPSDEDMPQETLYKGYIQPDMKEWILANATSLVCQAGTVRTMWVNFSINEDDPRGSN
SGHNLSENSICPPTTSSPVRSTILDCFGNLKRIHVGLDTTVLLNQAGNENAMIKVPVSDV
KHLIQWKGASVMKKDKRKSPEEKRKRRQVRDGSRHNYELLSAITPWIGNVILPVPANNKI
TYEADTIGIKGSTISLPKTLVFSFFIKALHIDAEGCKNVIKAREKRRPRMSSTELKPKTV
LPKTVLAALHEKRSLKSGIEEPAELLQHPLPSQPVHPQGMITPALIHPNTLVFMQPNIQG
PVQPFLLNGQKISLPPQAIPLPLIQLTAPVQPVTTLTSSSNSLSTESSKSFREAQRTRKP
TKKAQALMEETEAKISKRKTLKQNWVQQSSWVPTITQPINWIRTPSGLIQVTGVLSANIP
GYQMLKVPDDSPVIISTLQGPSTNPSQNPLSTPFVTASSVSTDHLMPSFSINSTPVHRGV
DIQTPLSNILVDNKSMSPQASIIVQQKESVVSTEVIGPTFCTKTFSDAAVALPFSSSSME
TVLWQHQSCSSKHSSVSPATNNICGVPSTSVSSVPTSVSGPPDEVFMEEAQNICVPETAI
QSAVMQKKPSADRPLHCEAQSDLPSDSLSFDSRLLFSDHQSKVDVWINGKGGVSLPHLEI
TLPYLPPSAFTIKKLTSLLKAKPSLVTASAKILSNELQNGRGEKEQVAATRKLVAERFAT
NPAYLRLKARFLSCFTFPALLATINPSEDCGVHGLPLSKNKDEDAGKNAGRKDQPPAPRT
ELNTSEKASAVHFSEFHTKKSQSTVR
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaaagtctacatgcccaccatttaaaggttccacctttgctataatggcgtcg
aataagttacttgcagagagagataaaatccaggaggagatcttggctctcgagaactct
ctgctcgcagataataataacatcacagacgtactccaatcggacagcggtagtgatgat
gaatctgatggcagtggacctgcagttgtcggagtggaacttgatgaccttgtggctgca
cgccatcggattcagagggagatagaggaaatagagaatacacttggtgtgaacgcagaa
cttgttgacatcttgacagagagtgaacaggacagtgattctagtaatgaggacagcgat
aatgttgagttggatcttcctcaaaatgttgagacttgcctacaaatgaatttggtctat
caggaggtgcttaaagaaaaactagatgagcttgagaagctcctgagggaaaatcgggag
caacagaaagagattgaggatcagttctctggtccatctacatcttgctcctcctcacaa
ggactctcttctcagaagctttttcttggatacttcatgaagccttatttcaaagacaaa
ctcactagtctgggtcctccagcaaatgaagaaaccaaagagaggatgagtcatggcacc
aggtccattgatgagctaaaaataaaaagatgggaggtgtggcagaaagctttactgacc
aatgcagtagctgcagatactctaaaacggatgctgcagcccaaactttccaagttagat
tatctgaatagcaagatgtctaaagctgaagatgaggaaaaggaggtgctgaaaaaacaa
atgcatttgattgataaagatattgcagatattagtgcaatgagagaagaacagctgtca
ggtggtcgcaacgacgaccacgattgggagaaaatatcgaacattgattttgaaggtttg
cggcatgctgacgatttaaaaagattctggcaaaactatttgcacccctgcattaacaag
acagtatggaagcaggaggaaattgatgaactgagaaaaattgtacaagagtacaactgt
tgtcattggaacagaatagctgaagctcttgggaccaacagaacagctttcatgtgcttc
cagacttatcagcgctacatttcaaagaccttcagaaggaaagagtggactaaggaagaa
gaccagatccttagagatcttgttggaaaaatgagaattggcaactttatcccttacatg
cagatgtcatttttcatggtgggtcgtgattcatcacagctgacatatcgctggacatct
gttctcgatccctctataaagaaaggcccttggtccaaggaggaagaccagttgttacga
aatgcggttgcgaagtatggcatgaaagagtggggaaaaatcagagtggaagtgccgggc
aggacagatggcgcttgtcgtgacagatatctagattgtcttcgagagaatgtgaaaaag
ggtccttggagcccagaggaggtggaacttctaaaacaaaaagttgagaaatatggtgtt
ggcaagtggactaaaattgcttcagagattccaaaccgtgttgactgccagtgccttaac
aagtggaagcaattgaacctagctgctctaggtaaaaagagagtaagacaaccaaaaaca
gttcaacaaaaagcaaagagacgaaaggtaatccatcataaaattaaaccgaagattgaa
gtcacttccagctcagaggatgaaacgcaaagaaaaattgaatacatggatagtgatgct
gaaccggaggtgccttcagatgaagatatgccacaggaaacactttacaagggctacata
cagccagacatgaaggaatggattcttgcaaatgcaacatccctggtttgtcaggcagga
actgtcagaactatgtgggtcaatttttccatcaatgaagatgatccaaggggatctaac
agtggtcacaatttatctgagaacagtatctgtcctccaacgacgtcgagtccagtccga
agcaccatcctagactgttttggaaacctaaagaggattcatgtgggtctagatactaca
gtcttgctgaaccaggctggcaatgaaaatgccatgataaaggtgcctgtgagtgatgtt
aaacacttaattcagtggaaaggagcctctgtaatgaaaaaggacaaaaggaaatctcca
gaagagaaaagaaaaagaaggcaggtacgggatgggtcgaggcataactatgaactcctt
agtgcaatcaccccgtggattggtaacgtgatactacctgtgccagcaaataataagatc
acatatgaagctgataccattggaattaaagggtcaacaatctctctcccgaagacacta
gtgttttcattctttatcaaagctctacacattgatgctgaaggttgcaagaatgtcatt
aaagctcgtgaaaagagaagacccaggatgtcaagtactgaattgaaaccaaaaacagtt
cttcctaaaacagtgttagcggcacttcatgagaagagaagtttgaaaagtgggattgag
gaacctgcagaacttcttcaacatccattaccatcgcagcctgttcaccctcaggggatg
attacacctgctttgattcatcccaacactcttgtttttatgcagccaaacatacaaggg
ccagtgcagccttttctgcttaatggacagaaaatatctctaccaccacaagctattcct
cttccactaattcagttgacagcaccggtgcaacctgtcacaaccttaacatcaagctcc
aactcactaagcacagagagctcaaaaagtttcagagaggctcagcgtactcgtaaaccc
acgaagaaagcacaagcgctaatggaagaaacagaagctaaaatttccaaaagaaagaca
ctaaaacaaaactgggttcaacagagttcttgggtacctactattacacagccaataaat
tggattcgtacccctagtgggttgatacaggtgactggagtgctctctgctaatattcca
ggctaccagatgttgaaagtgccagatgactcccctgtaataatcagcactcttcaaggt
ccctcaaccaatccaagtcaaaacccattatctacaccctttgtcactgcttcctctgtc
tcaacagatcacctaatgccgtctttctctataaacagtacacctgtacacaggggggtg
gatatccagacaccactttctaatatcttagtagataacaaaagtatgtcaccccaagca
tctatcatagtgcagcagaaagaatcagttgtaagcactgaagtgatcggacccactttc
tgtacaaagaccttctcagatgctgctgtagctctgcctttttcatcctcgtctatggaa
accgttttatggcaacatcagtcttgctcttcaaaacattccagtgtgtctcctgctacc
aacaacatttgtggtgtgccatcgacctctgtctcaagtgtaccaacttcggttagtggg
ccaccagatgaggtttttatggaggaagctcagaatatctgtgtccctgaaacagctatt
caatcagctgtcatgcaaaagaagccatctgctgatagacctctacactgtgaagctcaa
tctgaccttccctctgacagtttgagctttgatagtaggttattattttctgaccatcaa
tctaaagttgatgtctggattaatgggaaaggtggagtttcactgccacatctagagatc
acgttgccttacctcccaccatctgcctttactatcaaaaagctaacttctttgctcaag
gctaaaccctctctggttacagcctcggctaaaatcctatccaatgaactgcaaaatggc
cgaggcgaaaaagaacaagtagctgccacccgcaaactggttgccgaaaggtttgccaca
aatccagcatacctgcgattaaaagctcgtttcttgtcatgctttacctttcctgccctt
ttagccaccataaatccatctgaggattgtggggtgcatgggttacctttgagtaaaaac
aaagatgaagatgcgggcaaaaatgcaggaagaaaggatcagccgccagctccaaggact
gagcttaacaccagtgaaaaagcatcggcagtgcatttctcagagttccacaccaaaaaa
agccaaagtacagttagataa
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