Triplophysa dalaica: 130419029
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Entry
130419029 CDS
T09616
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tdw03000
]
130419029 (sox19a)
Transcription factors [BR:
tdw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
130419029 (sox19a)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
130419029
NCBI-ProteinID:
XP_056601350
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Position
4:complement(16540534..16546570)
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AA seq
300 aa
AA seq
DB search
MYSMLEHDMKSSVPPTHQSGQGMTQLNGGVTHGATHGSAKPGVNNQQQSVDPMDKVKRPM
NAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAMHMKEY
PDYKYKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYAGM
QSDALSYSQQLHRYDLSALQYPSAMATAQTYMNGANSYNPMSYSSSPQQPSPVMSMVKQD
QVSHSPTGSHSHQRGPLQGDLRDMISMYIPGGDNTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaacacgacatgaagtcgtccgtgccgccgacgcaccagagcggg
cagggaatgacacagttgaacggtggagttacgcacggggcgactcatggatccgccaaa
ccgggtgtcaacaaccaacaacagagcgtcgatcctatggacaaagttaaacggcccatg
aacgcttttatggtctggtctaggggtcagaggcgcaagatggcacaggaaaaccctaaa
atgcacaactccgagatcagcaagcgcctgggcgcggagtggaagctgttgaccgacgca
gagaaacggccgtttattgacgaggccaagcgacttcgtgcaatgcacatgaaggagtac
ccagattacaaatacaagccccgtcgtaaaacgaaaccggttctgaagaaggacaacccg
gctgctaagtatcctctatcggccggcaacttgttggcggcggccgctgcgcaaggatcg
ggaggaagtccgcggatggatagctacggctggggtcacacaggtggctatgctgggatg
cagtctgatgccctgagttacagtcagcagctgcaccgctatgatttgtctgccctgcag
tatccgtctgccatggccacggcacaaacttacatgaatggcgcaaactcctacaacccc
atgtcttacagcagctctccacaacagcccagcccggtcatgtccatggtgaaacaagac
caagtgtcccactcacccaccggatcccacagccaccagcggggtcctttacaaggtgac
ctgagggacatgataagcatgtatatcccgggtggagacaacacagacagtggagcacag
agaggttactccaacatccaacagcattacctcactggcacagcacctctcactcacatc
tga
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