Triplophysa dalaica: 130419058
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Entry
130419058 CDS
T09616
Name
(RefSeq) protein shortage in chiasmata 1 ortholog isoform X1
KO
K28108
shortage in chiasmata 1
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130419058
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Meiosis-specific proteins
Others
130419058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
CUE
Motif
Other DBs
NCBI-GeneID:
130419058
NCBI-ProteinID:
XP_056601438
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All DBs
Position
4:complement(27152480..27166240)
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AA seq
1429 aa
AA seq
DB search
MIHHCLHQNHPFAIIAVEYRYFTHLSMNINAMSYTCGKNRRSIRFKTVRFKGIDYISEAS
ARRQLMINLLELPVPLQLLGYMFPHNGKLQDNAYRTPWSNKILTSILPVTGSLMEDLKEC
TGFGDCLERLNIFQVRTGRGPDELVLSSNPSSQCSISATEALWHLEEVEISGNTSPWEES
FTPCTLDDSSFSYDDLTLPEEVMFTDRLRFINHLPSVHTMLQRLKLMTVSDPFLHSSAML
SDNVIFRHCASYTAVSDIVPDVTAPEENLTEVFEKESILNEESLMLAVEVHMESVRSHET
SFSLRKLQDLLNLTPESIEDKKPCADLHMEVTSADEHKTEVLQTEESSSWDSNWEPKSPG
ALRLYTEMELDLPLSPCNDLPPDLFLPDGPLSPEQLSPVYKRHFMSDSDFENREKSVWMA
EKHRECMVGFFLAEPQMSKPSVHTQTLSDLLMLLKVRSEHVENMDRPHLTDTRAMLPKNF
TDLSVYTENFQTADIETHQIDKFSPLSIVQIDEMLFAASFADHPAAVPPAPSKHPETYKD
EEKTVKLLRIEQTREINCKTAQTVQHVSNSTSFKHKTPERCPKRNDSRTICPSGEQPSFS
KEVSESPLLKHRDMKVMSTVHEHAERFDQKRERMSCGSSQLSNSSNSRQVNSLHVKSHES
MDPLSFFMMLRSSKKSPVQTPRQSTPASAEVNVRQISTENALPVQRVNRGNLVSNAERFF
TSTEKILTHEERPINKTIYVQATEIQRSAYRELNVLAVPCLSRAVESGVTALNNRDFATL
SPELTRFLLKQQERKHHTQQGADGVLDDITLLHVLVTLKELLLRCDLHAAADYLSQVRGS
CHLKCLEELMKMFEVLHYLSLKRSEPDPKLLELQNQMSTWMSSNMNHNNRVLVLTVKPVN
TGVLTALRQVSGNTVCAVSPEDEKSAVICRDVMNSLSGSRCVVVCRQHIGADFPWCSFSL
VFELHCVDHSPFSSLCSERNIKYISFSTAVPEFKDSKSASFLDSIPFVLLVTDGLLKRSR
IQRALETTYDMTLLERKHPPSAQKLGGDRYDVITVDENTAVFIQELSELEMEKASNRVVM
RLSSLSLQFTRCWLILHCSESHRALISRSIHINLVLIYSSFVLFGQQPEKFDVKVLLAYE
EEEIARYIYRISVHTFMSSDRDALSFLDRDWISVQTTEEERCLLQFPCINPLVAQLMLSR
APSLQWLLEASLVDLQEMFPQVPHKVIKLFSDITAEHKVKTAASESEDEASSQTNISAHL
PHPPQPQTEICQSQPSTEYFTVSLSGRQEGKSSIGQFRELIGQPLCLIKENHISDPAWTL
SNTLFSQDSATAKEEGRAHFISDPTPVEAAVLSGPQMLSFRNTVCEFSCKRQDQTHWTSP
ENTADHRTEERKRLRSEDANSVPPQCKRGKLLCERVPGRNDGQTRLRFF
NT seq
4290 nt
NT seq
+upstream
nt +downstream
nt
atgatacaccattgtttacatcaaaaccatccgtttgccatcatcgccgtcgaatatcga
tattttacccatttaagtatgaatattaatgcaatgtcttatacctgtggtaaaaatcga
cgaagcatccgtttcaaaaccgtcaggtttaagggtattgattatatatctgaggcctcg
gccagacgtcagctgatgatcaacttattagaacttccggttccgctccagctgctcggt
tacatgtttcctcacaatggaaagctgcaggacaacgcgtacagaacaccatggagtaat
aaaatcttaacaagtatactacctgtgactggatctcttatggaagacttaaaggaatgt
acaggttttggtgactgcctggaaagattgaatattttccaagtgcggacaggacgtgga
ccggatgaactggttctcagctctaaccccagctctcagtgcagtattagcgctacagaa
gccctctggcatttagaggaagttgagatcagtggaaacacttcaccatgggaagagagt
tttactccatgcacactcgatgactcaagcttcagttatgatgatctcactctcccagag
gaagtgatgttcacggaccgtctgagattcataaaccacctgccttcagttcacacaatg
ctgcagaggctaaagctcatgaccgtgtcagatccttttcttcattcatcagcgatgctc
tcagacaatgtcatttttaggcactgtgcctcgtacactgcagtttcagacatagttcct
gatgtcacagcgcctgaagaaaacctgacagaggtgttcgaaaaggagtcgatactaaat
gaggagtcactcatgttagccgtagaagtacatatggagtctgtccggagtcatgagacc
agtttctcattgagaaaactgcaagatcttctaaatcttactccagaatcaattgaagac
aaaaaaccctgtgcagaccttcacatggaagtcacatctgctgatgaacacaagactgag
gttctgcaaactgaagaaagcagctcttgggactccaactgggagccaaagtcgccaggt
gctttgaggttatacactgaaatggagttagatttgcctctctcaccgtgtaatgacctg
ccaccagacctgtttttgcccgacgggccactgtcacctgagcaactctcacctgtttat
aaacgacatttcatgtcagacagtgattttgaaaacagggagaaatctgtttggatggca
gagaaacatcgcgagtgcatggtgggattttttctagctgaaccacagatgtccaagcct
tcggttcacactcagacactctcggaccttctcatgctcctgaaggtgaggagtgaacat
gtggagaatatggaccggccgcacctcactgacaccagagcgatgcttcccaagaacttc
acagatctctccgtctatactgagaacttccagaccgccgatattgagacacaccagatt
gacaaattctccccactgtctattgtgcaaatagatgagatgctgtttgctgcaagtttt
gctgaccatcccgctgcagtccccccggccccgagtaaacatccagagacatacaaggat
gaagagaagactgtgaagttattaagaatagagcaaactagagaaatcaactgtaaaaca
gcacaaacagtgcagcatgtgtcaaactcgacatcctttaaacataaaacaccagaaaga
tgccctaaaagaaacgactccagaaccatttgtccgtctggagaacagcccagcttttct
aaagaggtgtccgaatcacctctgttgaagcacagagatatgaaagtgatgtcaacggtg
catgaacatgccgaacggtttgatcaaaaaagagaaagaatgagctgtggatcatcacag
ttatcaaacagttccaacagcagacaagttaatagtttacatgttaaatctcacgagagc
atggaccctttatccttcttcatgatgttaagatcttcaaagaaaagtccagtccaaaca
cctcgacagagcactccagcctctgcagaggtgaacgtgagacagatttcaacagaaaac
gcattgccagtccagagagtgaacagagggaatctggtctcgaatgcagaaaggtttttt
acatcgactgagaaaatcttgacccatgaagagagacccatcaacaaaaccatatacgtt
caggccacagagatccagagaagcgcatacagagagctgaatgtgttggcggtgccttgt
ctgagcagagcggtcgagtcgggcgtcaccgctttgaacaacagagactttgctactctg
tcacctgaactcacgcgcttcctcctaaagcaacaagagagaaaacatcacacacagcag
ggagcggacggtgtgttggatgacatcactctgctgcatgttctggtcactctgaaggaa
cttctgctcagatgtgaccttcatgcggccgctgattacctgagtcaggtgaggggctcc
tgtcatctcaagtgtcttgaggagctgatgaagatgtttgaggtgttgcattatctcagt
ctgaagagatccgagcccgacccgaaactactggagcttcagaatcaaatgagcacatgg
atgagctccaacatgaaccacaacaacagagttctagttttgaccgtgaagcctgtaaac
acaggagtgctcacggctctcagacaggtgtcgggaaacactgtgtgtgcagtaagccct
gaggacgagaagagcgcagtcatctgcagagacgtgatgaacagtctgtccggcagcagg
tgtgtcgtggtgtgccgtcaacacatcggggctgatttcccatggtgcagtttcagtctg
gtgtttgagcttcactgcgtggatcactcgcccttcagcagtttgtgttcagagagaaac
atcaagtacatctccttctccacggctgtgcctgaattcaaagacagcaagtctgcgtca
tttctggactcgattccgtttgtgttgctcgtcaccgacggtttgctgaaacgctcgagg
attcagcgcgctctggagaccacgtacgatatgactctgctggagagaaaacaccctccg
tctgcacagaagctgggaggagaccgttatgatgtcatcactgtggatgaaaacactgcc
gtgttcatacaggagctgagcgagctggagatggagaaagcgtctaatcgtgtggtcatg
agactgtcctctctctctctgcagttcacacgctgctggctcatccttcactgctctgag
agtcacagagcgctgatttccagaagcatccatataaatctggttctgatctactcttca
ttcgtgctgttcggacaacagcctgagaagtttgatgttaaggtgttactggcgtatgag
gaagaagaaatagccagatacatctatcggatctctgtacacacgttcatgagttcagac
agagatgctttgagcttcctggatcgagactggatcagtgtacagactacagaggaggag
cgttgtctgcttcagtttccctgtatcaatcctctggtagctcagttgatgctaagcaga
gctccgtctcttcagtggctgctggaagcttctcttgttgatctgcaggagatgtttcca
caggtccctcataaagtcattaagctcttcagtgatattacagccgaacacaaagtcaaa
acagctgcttcagagagtgaggatgaagcttcttcgcagacaaacatctcagctcatctt
cctcatcctcctcaacctcagacagagatctgtcaatcacagccgtctacagagtacttc
acagtttctctctctggacggcaggaggggaagtcgtccatcggccagtttagagagctg
attggtcagcctctgtgtttaataaaggaaaatcacatctcagatccagcttggacttta
tcaaacacactgttcagccaagattcagcaacagcgaaggaggaaggacgcgctcatttc
atctcagatccaacaccagtggaagctgctgtcctctctggtcctcagatgctgagcttc
agaaacactgtgtgcgaattcagctgtaaacgacaggatcagactcattggacgtcccct
gagaacactgctgatcacaggacagaagagaggaagagactgaggagtgaagatgcaaac
agtgtgcctccgcagtgtaagagaggaaaactgctgtgtgagagagttccaggcaggaac
gatggacagaccagactgagatttttctaa
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