KEGG   Triplophysa dalaica: 130419200
Entry
130419200         CDS       T09616                                 
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B
  KO
K15686  RNA-binding protein MEX3 [EC:2.3.2.27]
Organism
tdw  Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tdw03019]
    130419200 (mex3b)
   04121 Ubiquitin system [BR:tdw04121]
    130419200 (mex3b)
Enzymes [BR:tdw01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     130419200 (mex3b)
Messenger RNA biogenesis [BR:tdw03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     130419200 (mex3b)
Ubiquitin system [BR:tdw04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    130419200 (mex3b)
SSDB
Motif
Pfam: KH_1 KH_Vigilin zf-C3HC4_3 KH-I_KHDC4-BBP zf-RING_2 zf-C3HC4 RING_XB3-XBAT31 KH_2 zf-C3HC4_2 Prok-RING_4 KH_DEAH11_2nd zf-RING_UBOX zf-RING_5
Other DBs
NCBI-GeneID: 130419200
NCBI-ProteinID: XP_056601754
LinkDB
Position
1:32768331..32772171
AA seq 530 aa
MPSSVFADMERNSGGQGDALDDQRALQIALDQLSSLGLDNDENFLYDNEPRKKSVNMTEC
VPVPSSEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIIS
AAEHFSMIRASRNKNSSLNGTATVPGPPNLPGQTTIQVRVPYRVVGLVVGPKGATIKRIQ
QQTHTYIVTPSRDKEPVFEVTGMPENVDRAREEIEAHIAMRTGGLIEFTDENDFHANGTD
VGFDLHGNVSLWSKPNSSATPTSGRKPFSNYRNDSSSSLGSASTDSYFGNNSSPRLADYS
PPSPTLSYTASSNGNNNNNNINANGNGFVYGSEAISPDCADLPFESSPGFDTSPTPPGLM
WSQYERGSATTSAIFSANASTNANGLMASQRRANGTRLSPPLHQANSVSEHPLARRVRSD
PGGGTLSFPGYSPTGLSNGIAALSGSHHRGVPSDSSISSSSSSSSSSSSGTSRKGSRDCS
VCFESEVIAALVPCGHNLFCMECANRICERNEPKCPICHAAVTQAIRIFS
NT seq 1593 nt   +upstreamnt  +downstreamnt
atgcccagctcggtgttcgcggacatggagcgcaacagcggcggccagggggacgccctg
gacgaccagagagccctgcagatcgcgctggaccagctctcgtcactcggactggataac
gatgaaaatttcttgtacgacaacgagccaaggaaaaagagcgtcaacatgaccgaatgc
gtccccgttcccagctccgagcacgttgcggagatcgtagggaggcaaggttgcaaaatt
aaagccctgcgagcaaagaccaatacttatatcaaaactccggtgcggggagaggagccg
gtctttgttgtaacaggcaggcgggaggacgtagccatggctagaagggagatcatctct
gcagctgagcacttctccatgattagagcgtcgcggaacaaaaacagcagtctgaatggg
accgccaccgtacccggtccgcccaatctgcccgggcagaccaccattcaggtgcgggtt
ccatatcgggtggtggggctggtggtgggacccaagggggccaccatcaagcgcatccag
cagcagacacacacctacatcgtcacgcccagccgggacaaagagcctgtgtttgaagtg
acgggcatgccagagaacgtggaccgggccagggaggagatcgaagcacacatcgccatg
cgcacgggcggcctgatcgaattcacggacgagaacgacttccacgccaacggcacggat
gtgggtttcgacctgcacgggaacgtcagtctgtggagcaagcccaactccagcgctaca
cccacctcgggtcgcaagcctttctccaactaccgcaacgacagctcaagttctctgggg
agtgcctctaccgactcctactttggcaacaacagcagcccccggctggccgattacagc
cccccaagccccaccctcagctacactgcctccagcaatggcaacaacaacaataataat
attaacgctaacggcaacgggttcgtctatggcagtgaggccatctcgcccgattgcgct
gatctgcccttcgagtcctcgccgggattcgacacctcccccacgccgccgggcctgatg
tggtcacagtacgagcgtggctccgccaccacgtctgccattttctctgccaatgcttcc
accaatgccaacgggctgatggccagtcagcggagggccaacggcaccaggttgtctcca
ccactgcaccaagccaacagcgtctctgagcatccgctggcgcgccgggtgcgcagcgat
ccgggcgggggcaccctcagcttccctggctactccccgaccgggctgtccaacggcatc
gcggccctctcgggatcccaccaccggggtgtgccctctgactcctccatctcctcatcc
tcttcgtcatcctcttcctcctcctccgggacgagccgcaaaggcagccgggactgctca
gtgtgtttcgaaagcgaggtgatcgcagccctggtgccctgcggccacaacctgttctgc
atggagtgtgccaaccgcatctgcgagaggaacgagcccaaatgccccatctgccatgct
gcagttactcaggctatacgtatattttcttaa

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