Triplophysa dalaica: 130419228
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Entry
130419228 CDS
T09616
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a
KO
K04659
thrombospondin 2/3/4/5
Organism
tdw
Triplophysa dalaica
Pathway
tdw04145
Phagosome
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130419228 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
130419228 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
130419228 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
130419228 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tdw04131
]
130419228 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tdw04147
]
130419228 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
tdw00536
]
130419228 (thbs4a)
Membrane trafficking [BR:
tdw04131
]
Endocytosis
Phagocytosis
Opsonins
130419228 (thbs4a)
Exosome [BR:
tdw04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
130419228 (thbs4a)
Exosomal proteins of colorectal cancer cells
130419228 (thbs4a)
Exosomal proteins of bladder cancer cells
130419228 (thbs4a)
Glycosaminoglycan binding proteins [BR:
tdw00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
130419228 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
EGF
EGF_LMN_ATRN
cEGF
EGF_MSP1_1
DUF7630
YdbH-like
Motif
Other DBs
NCBI-GeneID:
130419228
NCBI-ProteinID:
XP_056601769
LinkDB
All DBs
Position
4:3789315..3800005
Genome browser
AA seq
967 aa
AA seq
DB search
MGVWIRTVLSLQVILLLPVTVKTQGIVYDLLASPDCLPDLLEGGIRAKNMDNAFILATLQ
LQSRAPAHIFRIFNAADNTDYFDFTVQGKLNKVILKYMKSNGKQGTNTFSKVQLADGQKH
HIMLHFGGLQQGTPTTTLYVDCSLAERVHDVPVAFKSLPQGSKRVTLKTLQTSSQDKLLD
LKLVLDESIENVVELQDCSPESSHNEGIEYKDHSGQQKETLQLLGTTSKMDAGPMFELMR
MIQELKEKVDRQTKETADLRKTILECVQCKGHSGTGEDETGKPNDRDSKCGPGVCFKPGM
CTETTDGVECAPCPKGYTGDGIQCDDIDECQVNPCFTGVRCINTVPGFRCEKCQRGFTGP
EIQGVGIYYAQSNKQMCNDVDECKVDNGGCTPNSNCHNTLGGFHCGNCKSGYMGDQTNGC
QNIDPGLGPASISERVCGNGQPNPCDINAECVVERDGSISCLCAIGWAGNGYACGKDTDI
DAYPDRELQCKDSSCKKDNCIFVPNSGQEDADRDGKGDACDEDADSDGILNEPDNCWLRP
NIDQKNSDKDLHGDACDNCMLVENPDQRDTDKDGLGDACDDDIDGDGLKNILDNCQGVPN
PDQKDGDNDGVGDACDSCPEVANPNQSDADNDLVGDTCDTNIDSDGDGTQDSKDNCPTII
NSSQLDTDKDGLGDECDEDDDNDGILDDHDNCRLVANVDQKDENEDGVGEACAGDFDKDH
VIDMIDTCPENAEITLTDFRAYQTVVLDPEGEAQIDPNWVVLNQGMEIVQTMNSDPGLAV
GYTAFSGVDFEGTFHVNTLTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAVPFRAVAE
PGIQLKAVKSKTGPGEFLRNSLWHTGDTNDQVRLLWKDPRNVGWKDKVSYRWNLKHRPQV
GYMRVKFYEGADLVADSGVIIDTSMRGGRLGVFCFSQENIIWSNLRYRCNDTIPEDYTEY
RAKQLTN
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtttggattaggactgtgttgagtttacaagttattttactgcttcctgtcacg
gtgaaaacacaaggaatcgtttatgatctcctggcgtcaccggattgtctccctgatctt
ctggaaggaggaataagagccaaaaacatggacaatgctttcatccttgcaaccctgcag
ctacagagcagggctccggcgcacatcttccgcatcttcaacgctgccgataacacggac
tactttgacttcacagtgcaggggaaactcaacaaagtcattttgaaatacatgaaaagc
aatggaaaacaagggacaaacactttctccaaagtgcaactggcggacggtcagaagcat
cacatcatgcttcacttcggtggtctgcagcagggcacccccaccacgacgctctacgtg
gactgcagtctggctgagagagtgcacgatgtacccgtagccttcaaatctttaccgcag
gggtccaagagagtgacactgaagaccctgcaaacatcctctcaagacaagctgttggac
ctgaaactcgtgctggatgagtccattgaaaatgtcgtggagcttcaggactgcagccct
gagagttcacacaatgaggggattgaatacaaagatcacagtggacagcagaaagaaaca
ctacaactgctcggaacaacatcgaagatggacgctggtccaatgtttgagttaatgcgg
atgatccaggagctgaaagagaaggttgaccggcagaccaaagagactgcagacctgagg
aagactatcctggagtgcgttcaatgcaagggtcattcgggaacaggagaggatgaaaca
ggaaaaccaaacgatagggattccaagtgtggaccgggggtctgtttcaaaccgggcatg
tgtacagaaacaacagacggcgtggagtgtgcaccctgtcctaaaggctacactggagat
ggaatccagtgtgatgatatagacgagtgccaggtcaacccatgttttactggtgtacga
tgcattaacaccgtgccggggttcagatgtgaaaagtgtcaacgaggcttcactggtcca
gagatccagggtgtgggcatttactatgctcagtccaacaaacaaatgtgtaatgacgtg
gatgagtgtaaggtggataatggcggttgcacacccaattcaaactgccataacacattg
ggtggattccactgtggaaactgcaagagcggatacatgggggaccagaccaacggctgc
caaaatattgatcctggacttggtcctgcttctatatctgaaagggtgtgtggaaacggg
cagccgaatccttgtgacatcaacgcagagtgtgtggtggagcgagacggcagcattagt
tgtctgtgcgccattggttgggcaggaaacggctacgcctgtggaaaggacacggatatt
gatgcctatccagacagggaactacaatgcaaagattcatcctgcaagaaggataactgc
atatttgttcccaactcgggccaagaagatgcagacagagatggcaagggagacgcctgt
gatgaggacgcagacagtgatggaatcctcaatgaaccggacaactgctggttgagacct
aacatagaccagaagaacagcgacaaagatctgcatggcgatgcctgtgataactgcatg
ctcgtagagaatccagaccagcgcgacacagataaggatggactgggagacgcctgcgat
gatgacatagacggagatggattaaagaacattctggataactgtcagggggttccaaac
cctgaccagaaggacggagataatgatggtgttggtgatgcatgtgacagctgccctgag
gttgcaaaccccaaccagtctgatgctgacaatgatcttgtgggtgacacatgcgacaca
aacatcgacagtgatggagatggaactcaggacagcaaagacaactgccccaccatcatc
aacagctcccagctagacaccgataaggacggactcggagacgaatgcgacgaggacgat
gacaacgacggcatcttggacgatcacgataactgcagactggtggctaatgtagatcag
aaggatgaaaacgaggatggggtgggtgaggcctgcgccggagactttgacaaagatcat
gtaattgacatgatcgacacctgtcctgagaacgcagagatcacactcacagactttaga
gcttatcagactgtggttctggatccagagggcgaggctcagattgaccccaactgggtt
gttctgaatcagggtatggagattgtccagaccatgaacagtgaccctggactagctgtt
ggatacacagctttcagcggtgttgactttgaaggcaccttccacgtgaacacattgacc
gatgacgactacgcgggcttcatcttcggttaccaggattcctccagtttctatgtggtg
atgtggaagcagacagagcagacgtactggcaggcggtgcccttcagagccgtggccgag
cctggcattcagctcaaggctgtaaaatctaaaacaggccctggggagttcctgaggaat
tctctttggcacaccggagacacaaacgaccaggtgcgcttgctgtggaaagaccctcgt
aacgtgggctggaaggacaaggtgtcctaccgctggaatctgaagcacaggcctcaagtg
ggatacatgagagtgaagttctatgaaggcgcagatcttgtggcagactctggagtcatt
atagacaccagcatgagaggcggccgtctgggggtcttctgcttctcacaggagaacatc
atctggtccaacctgagatatcgctgtaacgacacaatccctgaagactatacggagtac
agagccaagcagttgaccaactaa
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