Triplophysa dalaica: 130419502
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Entry
130419502 CDS
T09616
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
tdw
Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130419502
03036 Chromosome and associated proteins [BR:
tdw03036
]
130419502
Spliceosome [BR:
tdw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130419502
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
130419502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
RRM_occluded
FAT
Lsm_interact
Motif
Other DBs
NCBI-GeneID:
130419502
NCBI-ProteinID:
XP_056602283
LinkDB
All DBs
Position
4:complement(10964854..10976870)
Genome browser
AA seq
945 aa
AA seq
DB search
MAATSNEEQTLLPDIEEEAEGMEREMESEEDEEERMGVEHSEEDDDDKDTSEDERENEAE
IQRLEEQLSINVFDYNCHVDLIKLLRQEGKLHRLRKARQKMSELFPLTEENWLDWLKDEI
RVTEDESDREKVYELSERAVKDYVCPEIWLEYVQYSIGGMGAEGGIERVRSIFERALTAV
GLHMTKGTSIWEAYREFEIAILSTVQPPPGSVPSQEQQKLFTAQLQRIHTLFKRQLAVPL
MDMEGTYAEYSDWADDGVPEMVTHHYRRALQQMQKCKPYEETLLVSEPPKLAEYQAYIDF
EMKEGDPARVQIIFERALAENCLVPDLWIKYTSYLDRQLKIKDVVLSAHERAVRNCPWTM
GLWKSYLLALERHREDHQTVTDVFEKALNAGFIQATDYVDIWQSYLDYLRRRVDFSKEWS
RELDELRAAFTRSLDYLKQDVEERFSETGDLSCTIMQIWARIEALHCKNMQKARELWDSI
MTKGNAKYANMWLEYYNLERSHGDATHCRKALHRAVQCTSDYPEHVCEVLLSFERVEGSL
EDWDGAVQKTETKLNRVNEQRSRVAEKEASIARQEEEKVEHRRKGKADKKTQKKSQKANR
TGDKRKAEDEYEEEWGEDTELPSKRHKGDAAEELMETESGLFGRRAPPPRKNGPPGYRKN
QQVATEAPRQTQEMAQEQRKDENSIFVSNLPFNLEDPESKLRELFRTCGTIQQVRPVFTP
KGVFRGYCYVQFEDHLVVPEALKMDRLDVNGRPMFVSPCVDKNKNPDFKVFKFNTSMEKH
KIFISGLPYSCTKEQLEQLCKEHGTIIASRLVTNRSGKPKGLAYVEYENETQASQAVLKL
DGTMLENLKLSVAISNPPSRKIEDKVVPSRILGAAMPRQLQGARGKGRTQISLIPRSLHR
QSTPDAKAENGTVTDGVHGGPGTTNLATQTKTLSNEDFARMLLKK
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgacgagtaacgaagaacagacgttgttgcccgatatcgaagaggaggctgag
ggcatggagcgagagatggagtcagaggaggacgaagaagagcggatgggagtcgagcac
tccgaggaagatgacgacgacaaagatacttctgaggacgagagggagaacgaagcggag
atccagcgcctggaggagcagctgtcaatcaatgtatttgactacaactgccatgtagac
ttgatcaaactcctgaggcaggaagggaagctgcacagactgcgcaaagccagacagaag
atgagcgagctctttcctctcaccgaagagaattggctggactggctgaaagatgaaatt
cgtgtaacagaagatgagtcggaccgcgagaaagtctacgagctatctgagagagctgtg
aaagattatgtttgtccagagatctggcttgaatatgtacagtactccatcgggggaatg
ggagccgagggaggcattgagcgggtccggtccatctttgagagggcgctgacagcagta
ggcctacatatgactaaaggaacttcaatctgggaggcgtacagagagtttgaaattgct
attctctccacagtacagcctcctcctggcagtgttccctcacaggagcaacagaaactg
tttaccgcccagctgcagcgcatacacacgcttttcaaaaggcaacttgctgtacctctg
atggatatggagggaacatatgcagaatactcggactgggcagatgatggtgtacccgag
atggtcacacaccattaccgacgtgcactgcaacagatgcagaaatgcaaaccttatgag
gagactttgcttgtctctgaacctccaaagctggcagagtatcaagcctacatagatttc
gagatgaaggaaggcgatccagcccgagtccagatcatttttgagcgagcgctggcggag
aactgcctcgtgcccgacctgtggatcaagtacacctcgtatctggatcgtcagttgaag
attaaagatgtagttttatctgctcatgagcgagccgtcaggaactgcccctggacaatg
ggcctgtggaagagctatcttttggcattggagaggcatagagaagatcatcaaacagtg
acagatgtgttcgaaaaggccctgaatgcaggattcatacaggcgactgattatgtcgat
atttggcaatcatatctggactacctgaggagacgtgttgatttcagcaaagagtggagc
agggagctggatgagctgcgggcggcttttacacgctcccttgactacctgaaacaagat
gtcgaagagcggttcagtgaaactggagatctgtcctgcacaataatgcagatctgggcg
aggatagaggccttacactgtaagaacatgcagaaggcccgtgagctgtgggacagcatc
atgacaaaagggaacgctaaatatgccaacatgtggctagaatattataacctggaaagg
tcacacggagatgccacccattgcagaaaggctctccacagagctgtacagtgcacatca
gactaccctgaacatgtgtgtgaagtcctgcttagctttgaaagagtggagggttcttta
gaagattgggatggtgcagtgcagaaaacagagaccaaactcaacagggtgaacgagcag
agatcaagagtggctgagaaagaggcttctattgctagacaagaggaggagaaagtcgaa
cacaggaggaaaggcaaggcagataaaaaaacccagaagaaaagccagaaagcaaacaga
accggagataaacggaaagctgaagatgaatacgaggaggaatggggagaggatacagag
ctcccctcaaagaggcacaaaggggatgctgcggaggagctcatggagaccgagagtggg
cttttcggacgaagagctccacccccgcgtaaaaacgggccgcctggttaccgtaaaaat
cagcaggttgcgacggaagcaccacgccagacccaggaaatggcacaggagcagcgtaaa
gatgaaaacagcatctttgtcagtaatctgccttttaatctggaggatcctgaaagcaag
ctgcgggagttgtttcggacctgtgggactattcagcaggtgcgaccagtgttcacaccg
aaaggtgtttttaggggttattgctacgtgcagttcgaggaccatctggttgtaccagag
gctttgaaaatggacagactggatgtgaatggtcggcccatgtttgtatcgccttgtgtc
gacaagaataagaatcctgattttaaggtctttaagtttaacacgtcaatggaaaagcac
aagatctttatctctggcctgccttacagctgcactaaagaacagctagaacagctctgt
aaggaacacggcacaatcattgccagccggctagtcaccaatcgttcaggcaaacccaag
ggtttggcatacgtggaatatgagaatgagacacaggcctcgcaagctgttttgaaactg
gacggcaccatgctggagaacctcaagctctcggttgctattagcaacccaccgagcagg
aagattgaagataaagtagtgcccagtcgaatcctgggggcagcaatgcctaggcaactt
cagggagcaagggggaaaggacgcactcagatctctctgatacctcgttcacttcatcgg
cagagcacacccgatgccaaagctgagaacgggacagtaacagatggggtgcacggagga
ccaggaaccactaacctggccacacaaacgaagacgctgtccaacgaagactttgccaga
atgcttctcaaaaagtaa
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