Triplophysa dalaica: 130419620
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Entry
130419620 CDS
T09616
Symbol
sptbn4a
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
tdw
Triplophysa dalaica
Pathway
tdw04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
130419620 (sptbn4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tdw04812
]
130419620 (sptbn4a)
Cytoskeleton proteins [BR:
tdw04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
130419620 (sptbn4a)
Intermediate filaments
Intermediate filament-binding proteins
130419620 (sptbn4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
PH
PH_9
Crystall_4
Baculo_p24
Motif
Other DBs
NCBI-GeneID:
130419620
NCBI-ProteinID:
XP_056602466
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Position
4:9700780..9728276
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AA seq
1400 aa
AA seq
DB search
MLTARDGARDEAQKLHRKWMKHQAFMAELARNKEWLAKIEQEGEELVQEQPELRSVVQIK
LKEIRECWSHLENTTKVKARQLFETQNHRTSDVPVNSLSDLDQHLTIIQDQPPTLSSAHT
TQPTLLQPRPTFSQQLQRIQSMEAQMQLYQGVGEVRGGADQRRLEGEEPRGIAETRIVRL
IEPLKERRRILLASKEMHQVTQDLEDEIIWIQERLHLASSTEYGTSLQNVQLLIKSHEAL
QIEMLARRGRLEEVLDRAEVVAALQTPEVEIVREGAGHVRQLWEVLQVQMERRSVMLEAV
SHAQQYYTQAAKAESWLSGQKLQVLNEEKGDDEVSTLKLLKEQLALEQTVENYAETVSSL
SQLCRRMLELGHPDSEQITKQQAHIDRLYVSLKDLVEQRKTKLEQQYWLYQLKREVEALE
KWITEREAVASSTELGGNLEHVTNLQESFTRFSSETRSVGQKQMDSVNKMVNEMIDCSHS
DAATIAEWKDGLNESWADLLELMETRAQMLAASYQLHKFFTDCQEVLVQIEGKMRQLPEV
RSCQVSSANPGTLQRLLHSFEHSLQLLVSQVRQLQENAAQLRAIYAGEKADAILSREQEV
MQAWKELLVACEGSRVQVTTVTDKIQFFAMVRELSMWMDGIMGQIGPADSARDISMLEGM
MSQHQSLKIKMDNKGKNFVHCVEMGKMLLAARNPAAEEVKEKLDYVIAKQKDLNDRWEQQ
WEKLQLAQQRLQSTQAGLVEQPWLTIKEPITPTTRDAGGGSDEVEELIRRHEAFRKAAAT
WKDHFSSLRQAEKLKEEQNKPATSSLLSRQMFPLSCLVPSSSSSSSSSSLFRNPLQDSLL
ESKPGPDLIHSIEHTMAHALTQRLGSTLNPYSPVMNGSSYLGLNQPPGLVGEGLSYHGLK
QQGVSVLDNSSYPGLNQQVGVLGVNSSSYTGLNQQGALGDDNSGYHSLNHLGAVGVVEPK
MGYAWQHLKADCLQSKINHIHKVVPPLLEAHRAQLTCGGANMPAPPMGMDPSLEMIHSRL
QRDPRGSRSDPQMDHLRREREYRLGRQTSSEQEIQARLNELPLIVRQERYRRRMERQSSS
EQEGSGKQRVPKHDSSDADSGREPSDKKQSGEKRSTMAEIVEQAQEREACTARGEMYRPP
SSLSAPVGRLDRPRARDRPKPRRRPRPKEPEEPRRSRSAPSQSIATTPQPPTHTIQHEGF
LYRKHEEEGKERSPNSKSWVNLFCVLKQGEIGFYKDARHRTTPYNDEPLLNLAICTFDTT
NGYKKKKNVFILRTTADGDYIFLAKDEEDLKGWVNSINASLKEIEDIAKWEKATNSSTDP
DKSERKERSEGAEPSEGAERSEKSERSDRSDKIEASDKSSEKRDASEKESGGRGGRGKRG
ERAERGELGSRGSSTSGKSK
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgctgacagctcgtgatggagctcgggatgaagctcagaagctgcacaggaaatggatg
aagcaccaggccttcatggccgaactcgcccgcaacaaagaatggctcgccaagatcgaa
caggagggcgaggagctggttcaggaacagcccgagttgcgttcagtggtgcagataaag
ttgaaggaaatcagagagtgctggtctcacctagaaaacaccactaaggtcaaggcccgg
cagctgtttgaaacccagaatcaccgtactagtgacgtacccgtcaacagcctcagtgac
ctggaccagcatctcaccatcatacaggaccagccacccacactgagctccgcccatacc
actcaacccacccttctacagccccgccccacttttagccagcaactgcagaggattcaa
tcgatggaagcccagatgcagctttatcagggtgttggggaagtgagaggcggagctgat
cagcgaagactggagggggaggagccaagaggcatagcggagacacgaatcgtgcgtctc
attgagcctttgaaggaaagaaggcgtatccttctggcttcgaaagaaatgcaccaggtc
acccaggacctggaagatgagattatatggattcaggagcggttgcatctggcctcatct
acagaatatggcaccagtctccagaatgtccaactgttaataaaaagccatgaggctttg
cagatagaaatgctggctcggagagggcggctggaagaagtgctggatagggcggaggtt
gtcgctgctttgcaaaccccagaggtggagattgtgcgggagggggcagggcacgtgagg
cagctgtgggaggtgctacaggtacagatggaacgtcgctcagtgatgctggaagctgta
agccacgcccagcagtactatacccaggcagcaaaggcggagtcttggctcagtggacag
aaacttcaggttctcaatgaggaaaaaggagacgatgaagtgagtactcttaaactctta
aaggagcaactggctttagagcagacagtggagaattatgctgaaaccgtgagctcactg
tcgcagctgtgccgtcgtatgcttgagctgggacaccctgacagtgagcagatcaccaaa
cagcaggctcatattgacaggctctacgtgtctctgaaagatctggttgagcagagaaag
acaaagctggagcagcagtactggctgtatcagctgaagcgagaggtggaggcactggaa
aaatggatcactgagagagaggctgtagcaagctccacagagctcggagggaacctggag
catgtcacgaatctacaggagagctttactcggttctcgtctgagacgcgttcagtgggc
cagaaacagatggattccgttaacaaaatggtgaatgaaatgattgactgcagtcattct
gatgccgccaccatcgcagaatggaaggacggactgaatgagtcctgggcggatctgctg
gagctcatggagaccagagcacagatgcttgctgcctcataccagctgcataagtttttt
actgattgtcaagaggtgttggtccaaattgaaggaaagatgaggcagctgccggaggtg
aggtcctgtcaagtgagctcggccaaccctggcacacttcagagactcctgcactccttt
gagcactccctgcagctgctggtctcccaggtacgtcagctgcaagaaaacgcagctcag
ctgcgagccatttacgccggagagaaggcagatgccattctgagccgtgagcaggaagtg
atgcaggcctggaaagagctcctcgttgcgtgcgagggcagtcgcgtgcaggtcaccacg
gttaccgataagatccagttcttcgccatggtgcgggaactgagcatgtggatggatgga
atcatgggacagatcggcccggctgatagcgcgagggacatctctatgctggaggggatg
atgtcgcagcatcagagcctgaaaattaagatggacaacaagggcaagaactttgtgcat
tgcgtggagatgggaaagatgctactcgcggcccgtaaccctgcggctgaagaggtaaag
gagaagctggactatgtgatagcaaagcagaaagatttaaatgaccgatgggagcagcaa
tgggagaagcttcaactggcccaacagaggctacagtctacccaggcgggattggttgag
cagccctggctcacaatcaaggagccaatcactccaaccactcgtgatgcagggggcggg
tctgacgaggtagaggagctgattcgcaggcacgaagcattccgcaaggccgcagccaca
tggaaagaccatttcagctcattgcgacaggcagaaaagttgaaggaggaacagaacaag
cccgccacctcctcactcctcagcaggcagatgtttcctctctcctgccttgtgcccagc
tcctcatcctcttcttcgtcctcctctctcttccgtaatcctcttcaggactcgcttctg
gagtccaagcccgggccggacctcatacactccattgaacacacaatggcacacgcgctc
acccagcggcttgggtccaccctgaacccctactcacctgtcatgaatggctcatcctac
ctcgggctcaaccagccaccaggactcgttggggagggactttcctaccacgggctaaaa
caacagggtgtttcggtattggataattcaagctatcctgggttaaaccaacaagttggt
gtcttgggggtcaacagctcaagctacactggattaaaccaacagggtgctttaggagac
gacaactctggctaccacagcctgaaccatttaggggctgtgggggtggtagaacccaaa
atgggatatgcttggcagcacctgaaagctgactgccttcagtccaaaatcaaccacatt
cacaaggtcgttccacctttactggaggcgcaccgagctcagctcacctgtggaggagca
aacatgccggctccccctatgggcatggacccctcgctggagatgatccacagccgttta
cagagggacccccgtggtagccggtccgacccgcagatggatcacctgaggcgggagagg
gagtaccgccttggtcgacagacctccagcgagcaggagatccaggcgcgactcaatgaa
ctcccacttatagttagacaagaacgataccgtcggagaatggagagacagtcgtctagc
gagcaggagggaagcgggaagcaaagagtaccaaaacatgactccagcgatgcagattca
gggagagagccgtcggacaagaaacagtctggggagaagcgttccactatggctgagata
gttgaacaagctcaggagagagaagcttgcactgcaagaggggagatgtaccggcccccc
agcagcctctctgcacccgtgggccgcttggatcgaccccgcgcacgtgatcgccccaaa
ccacggcggagacctcgcccgaaagaaccagaggagccacggaggtcacgttctgctcct
tcgcagagcatcgcaactacaccccaacctcctacacacaccatccagcatgaaggattt
ctctacaggaaacatgaggaggagggaaaagagaggagccctaacagcaagtcgtgggtg
aatctgttttgtgtgctcaaacaaggagagatcggtttctacaaggacgcaaggcacagg
accacaccctacaacgatgagccccttctcaacctggcaatctgcacttttgacactacc
aatggatataaaaagaagaagaatgtcttcattctcaggaccactgctgatggggattac
atcttcctggccaaggatgaggaggatctgaagggctgggtcaacagtatcaatgctagc
ctaaaagagatcgaagatattgccaagtgggaaaaagccacaaactcctccaccgaccct
gacaaatcagagcgcaaggagcgatcagaaggagcggagccatccgagggggcggagagg
tcagagaagtctgaacgttcagaccgatcagataaaatagaggcatcggacaaaagctca
gaaaagagggacgcatcagagaaagaaagcggagggcgaggagggagaggaaaacgaggg
gagagagcggaaaggggagaactgggttccaggggttccagcacttccgggaaaagcaag
tga
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