KEGG   Triplophysa dalaica: 130419655
Entry
130419655         CDS       T09616                                 
Name
(RefSeq) collagen alpha-1(XXV) chain
  KO
K24356  collagen type XXV alpha
Organism
tdw  Triplophysa dalaica
Brite
KEGG Orthology (KO) [BR:tdw00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tdw00536]
    130419655
Glycosaminoglycan binding proteins [BR:tdw00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   130419655
Motif
Pfam: Collagen
Other DBs
NCBI-GeneID: 130419655
NCBI-ProteinID: XP_056602521
EnsemblRapid: ENSTDLG00000005804
LinkDB
Position
1:complement(4140086..4287352)
AA seq 684 aa
MRGLEANKESRSAVKMESDTGAGKRRHCLKGAVDVIPFVFSVVSFAFCFLLSVQNSDIKE
RVVDLEIGSGARLLSPLNGLTMDQFNAMVQEKVDTLLSQRSYEHLARVRTVRETSPDCNC
PPGPPGKRGRRGRDGDPGPPGTPGPKGEKGDQGDQGPRMVFPKINHGFLSADQQLIKRRL
IKGDQGQAGPPGPPGPPGPPGPRGPPGDTGKDGPRGVPGLSGDPGSPGEFGQMGPEGPPG
QMGAIGPPGTDGIKGDMGMTGLDGIPGAKGDRGERGEKGDMGEDGPKGESGEKGDAGSSA
AGIKGEPGEPGRGGHKGEPGLPGLPGLPGIKGEPGFYGPQGEPGLPGLPGTKGERGEPGP
PGKGERGETGPAGHKGEPGEPGTLGPKGYKGDTGDKGDFGQEGPQGPPGDKGDQGTTEII
DYNGNIQEALQKITTITVTGPPGPPGPVGPKGVKGDQGVPGLPGLDGERGHKGSKGDMGI
PGISGEKGAMGLPGLQGLSGLKGDKGDGGLSGPQGPSIIGPPGALGPHGPPGPMGPHGYP
GPKGEPGVHGLKGLRGEPGHKGDRGPLGLPGASGSDGKPGPRGVDGPVGASGPAGPKGDR
GEKGDVGDPGPRGPYGLPGAAGTPGLDGLPGLKGDKGVEGERGEKGFRGLKGEKGDPGQP
GLDGLDAPCQLGPDGLPMPGCWQK
NT seq 2055 nt   +upstreamnt  +downstreamnt
atgaggggtctagaggcaaataaggagtcccggagcgcggtgaaaatggagagcgacacc
ggtgctggcaagcggcggcactgtcttaaaggtgccgtggatgtgataccgtttgtcttt
tctgtcgtgtcctttgccttttgctttttactgagtgttcagaacagtgacattaaggag
agagttgtggatttagaaatcggaagtggtgcgcgcctcttaagtccgcttaatggactg
accatggatcagtttaatgcaatggtacaggagaaagtggacacgctactgtcacagcgc
tcttatgaacacttggctagagtaaggactgtccgggaaacctcaccagactgcaactgc
ccaccaggtccacctggaaaaagaggaagaagaggacgcgacggagacccaggacctcct
ggcacacctggtccaaaaggtgaaaagggcgatcaaggcgatcagggacctcggatggtc
ttccctaagatcaatcatggctttctttctgctgatcagcaactcattaaacgtcggctc
attaagggagatcagggtcaggccggccccccaggacctcccggacctcctggcccccct
ggccccaggggacctccgggagacacaggaaaagacggcccgagaggagttccagggctt
tcaggagaccctggaagtcctggtgagtttggtcaaatgggacctgagggccctccagga
cagatgggtgcaattgggccgccaggtactgatggaataaagggagatatgggtatgaca
ggattagatggaatccctggcgccaagggtgacagaggtgaacggggtgaaaagggagac
atgggagaggatgggccgaaaggtgaatccggagagaagggtgatgccggctcttctgct
gctggcatcaagggtgaaccgggtgagccaggacgaggaggacataagggagagccagga
cttccagggctgcctggactccccgggattaagggtgaacctggtttctatggacctcag
ggtgagcctggactgcccggcctgccaggaacaaagggagagagaggagaaccaggacca
cctggtaagggtgaacggggcgagactggcccagcaggacacaagggagagccgggggaa
ccaggtactctaggccctaaaggttacaagggggacacaggagacaaaggagatttcggc
caagaaggtccacaaggtccacccggagataaaggtgaccagggtacaactgaaatcatt
gactacaatggaaacatccaagaggctcttcagaagataaccactattacagttacgggt
cctccgggaccacccgggccagttggaccaaagggggtaaagggagatcagggtgttcct
ggacttccgggcctggatggagaacggggtcacaaaggctcaaaaggtgacatgggaatt
cctggaatatcaggagaaaagggagcaatgggacttccggggttacagggtttgagtggt
ctgaaaggagacaaaggagatggcggtctgtctggtcctcagggaccttcaatcattggg
ccccccggagcactggggcctcatggaccccctggacccatgggtcctcatggataccct
gggccaaagggggaaccaggggtgcatggtctcaaaggattgcgtggggagcccgggcat
aagggcgacagaggacccctgggtctccccggagcgtctggctcagacggcaagccggga
cccaggggtgtggatggaccagtcggtgcatctggtccagcgggtccaaagggagataga
ggtgagaagggtgatgttggcgatcctggacccagggggccgtatgggttacctggagct
gctggaacaccaggactggatgggttgccaggcttaaagggagacaagggcgtcgagggg
gaaagaggagaaaagggtttccggggcttaaagggtgaaaagggagacccaggtcaacct
ggtttggatgggctggatgccccgtgccaattgggtccagatggacttccaatgccaggc
tgctggcagaagtga

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