Triplophysa dalaica: 130419669
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Entry
130419669 CDS
T09616
Symbol
sin3ab
Name
(RefSeq) paired amphipathic helix protein Sin3a isoform X1
KO
K11644
paired amphipathic helix protein Sin3a
Organism
tdw
Triplophysa dalaica
Pathway
tdw04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
130419669 (sin3ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tdw03036
]
130419669 (sin3ab)
Chromosome and associated proteins [BR:
tdw03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
130419669 (sin3ab)
REST complex
130419669 (sin3ab)
Heterochromatin formation proteins
Other heterochromatin formation proteins
130419669 (sin3ab)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
Motif
Other DBs
NCBI-GeneID:
130419669
NCBI-ProteinID:
XP_056602544
LinkDB
All DBs
Position
1:11599193..11617191
Genome browser
AA seq
1268 aa
AA seq
DB search
MKRRLEDQETVIGSQRRLPGGADSFQHRVLNSASSLFETAPDNMQPSSSMQYSVSQTYQL
SMAQGSVGHGHTSNSAVHSGPHHHGPAVQSVAQGHSHASPTSAPTLGQQQFQRLKVEDAL
SYLDQVKLQFGNQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLIMGFNTFLP
PGYKIEVQTNDLVNVTTPGQIHHITPHGISVQNLPITHPSQPQPQPAAPTSSAALVIPSQ
PTAAKISKPMQSPALTPTSQPNPSIPSYASPRSPSAQSHTPISSGTAGTTPLQNNQPVEF
NHAINYVNKIKNRFQGQPEVYKSFLEILHTYQKEQRNAKEAAGNYTPALTEQEVYAQVAQ
LFKNQEDLLSEFGQFLPDANNSVPFFVMQLLSKTAAEKAESVRIDHGGTVKRPQLNNKQK
FNQNGCQIRRHAGPPTTPSVKKKPKFMGKDHPMAEASKLGIGAESLFFEKVRKALRSSEG
YDNFLRCLVIFNQEVISRAELVQLVLPFLGKFPELFTWFKNFLGYRECVQIESFPKERAT
EGIAMEIDYASCKRLGSSYRALPKSFQQPRCTGRTPLCKEVLNDTWVSFPSWSEDSTFVS
SKKTQYEEHIYRCEDERFELDVVLETNLATIRVLEAVQKRLSRMSAEEQAKFRLDNTIGG
SSEVVHRKAIQRIYGDKAPDIIDGLKTNPVVSVPIVLKRLKIKEEEWREAQRGFNKIWRE
QNEKYYLKSLDHQGINFKQNDTKVFRSKTLLNEIETLYDERQEQASEDNATPLSGPHITL
TYEDSQILEDAAALIIHHVKRQAGIHKDEKYKIKQIIYHFIPDMVFARRGELSDVEEEEE
EEETEPDEDGTKKHNGTTSTKSKLLFSQTAASQQKLSNCDDAYNLFYVNNNWYIFLRLHQ
VLCSRLLRIYGQAEKQIEEDSREREWERNVLGLKKVKNDSPAIQLRLKEPMDIDVEDYYS
AFLEMVRNLLDGNMETSQYEDQLREMFTIHAYIAFTMDKLIQSIVRQLQHIVSDEICVQV
TDLYLSECANNATCGSQSTQASRAGAETTYQRKAEQLMSDENCFKLLFQKSKGTVQLAVE
LLDTEEENSDETVEAERWPDYVERYLNTNSASPELREHLSQKPVFLPRNLRRIRKCQRGQ
EVQMRDAKETAKKSSEAGEDSKIECMFKLNSYKMVYVFKSEDYMYRRSAQLRAHQSHQRV
TTRLHQRFQLWLDRWQKDHVTGDMAAATNNWLMGKDHEGMLPCRTTREPKIVHYQNINKY
KVSYSTTL
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgaagcggcgcttggaggatcaggaaacagtgatcggctctcagcggcggctccctggg
ggtgcagacagctttcagcaccgcgtccttaactctgcctcctccctgttcgagactgca
ccagataacatgcagccatcatccagcatgcagtactccgtttctcagacctaccagttg
tcgatggcccaaggctctgtgggacatggacacaccagcaattcagctgtgcacagtggg
cctcatcaccatggaccagctgtccagtctgtggcacagggtcactctcatgctagtccg
acttcggccccaacactgggccaacagcagttccagagactcaaggttgaagatgcactt
tcgtatttggatcaagttaagcttcagtttggcaatcagccgcaggtctacaatgacttt
ctggatatcatgaaggagttcaagtctcaaagcattgatacaccaggtgtgattagtcga
gtctctcagctcttcaaaggtcatcctgatctcatcatgggcttcaacaccttcctgcca
cccggttacaaaattgaggttcagaccaatgacctggtcaacgtgaccacacccggccag
atccaccacattaccccacatggtatctctgtccagaacctccccataacccatccgtcg
cagccccaacctcaaccagcagccccgaccagcagcgctgcattggtcatccccagccag
ccaaccgccgccaagatcagcaagccaatgcagtctcctgcactgaccccaaccagccag
cccaatccgtccattccctcatacgcctctcctcgctcgccgtcggcccagtctcacacc
cccatcagcagcggtactgccggtaccaccccgctgcagaacaaccagcctgtggagttc
aaccacgccatcaactatgtgaacaaaatcaagaaccgctttcagggccagccagaggtc
tacaaatccttcttggaaatcctgcacacataccagaaggaacagcgtaatgctaaggag
gcagcgggaaactacacacctgctctgaccgaacaggaggtgtatgctcaggtagcccag
cttttcaaaaaccaggaggaccttctatctgaatttggccagttccttccagatgctaac
aattcagtgcctttctttgttatgcagttattgagcaagacagcggccgagaaggcagag
tctgtacgaattgatcatggtggtacagtgaagagacctcagctgaataacaagcagaag
ttcaaccagaatggctgtcagatccgcagacacgcgggaccccccactacaccctctgtt
aagaagaagccaaagtttatgggaaaagaccatccaatggctgaagccagcaaacttgga
attggtgcagagtctctcttttttgaaaaggtgaggaaggcactgcggagttcagagggc
tatgacaattttctgcgctgtctggtcatcttcaatcaagaagtgatctcacgtgctgag
cttgtgcagctggtcttaccctttttagggaaattccctgaactttttacttggttcaag
aactttcttggctacagagaatgtgtccagattgaaagctttcccaaagaaagagccact
gagggcattgctatggagattgactatgcgtcctgcaagagactgggctccagttaccga
gccctgcccaaaagcttccaacagcccagatgcacgggcagaaccccgctctgcaaagag
gtgcttaatgatacttgggtgtcatttccatcgtggtctgaggattctacctttgtaagc
tccaaaaagactcaatatgaagaacatatatatagatgtgaagatgaacgctttgagctc
gatgtggttttggagacaaatctcgccactatccgcgtcctggaggctgttcaaaagagg
ctctcgcgtatgtccgctgaagaacaagctaagttcaggctggacaacaccatcggaggc
tcctcagaggtcgttcatcgtaaagctatccagaggatatacggcgacaaagccccagac
atcatagatgggctgaagacgaatcctgtggtctctgtacctattgtactcaaaaggctg
aaaattaaagaagaggagtggcgagaggctcaacgtggcttcaataaaatctggagggag
cagaacgagaagtattacctcaagtctttagatcaccagggtattaacttcaaacagaac
gacacaaaggtgtttcgctccaagacgctgctcaatgaaatcgagactctgtatgatgag
cgacaggagcaggcttcagaagacaatgccaccccgctctcaggcccccacataaccctc
acgtacgaggacagccaaatactagaggatgcggccgctctcatcatccatcacgtcaag
aggcaggctggcatccacaaagacgagaagtacaaaatcaaacaaatcatctaccacttc
atccccgacatggtgttcgccagacgcggcgagctttccgacgtggaggaggaggaagaa
gaggaggagaccgaaccggatgaagatgggactaaaaagcacaacgggacgacgtcaacg
aagtctaagctccttttcagccaaacagcggcttcccagcagaagctcagcaactgcgat
gatgcctacaacctcttctatgtcaacaataactggtacatcttcctgaggctgcaccag
gtcctgtgctcccgactgttgcggatctacggacaagcagaaaaacagatcgaggaagat
agcagagagagagagtgggaaagaaacgtactcggtctgaaaaaagtgaagaatgacagc
ccggcgatccagctgcgattaaaagaaccaatggacattgatgttgaagactactactct
gcatttttagagatggtgcgaaaccttctagacggcaatatggagacgtctcaatacgag
gaccagctgagggaaatgtttaccatacatgcatacattgccttcaccatggacaaactc
attcagagtatagtcagacagctgcagcatatagtcagtgatgagatctgtgtacaggtg
actgatctttatcttagcgagtgtgccaacaatgccacatgtggctcccagtccacccag
gcatccagagccggtgccgagacaacctaccagcgcaaagccgagcagctgatgtctgat
gagaactgctttaagttactgttccagaagtctaaggggactgtgcagctggctgtggag
ctgttggacacagaggaagagaactcggatgaaactgttgaagctgagcgctggcccgac
tacgtggagcgatatctgaataccaactctgcctctccagaacttcgtgagcacctctct
cagaagcctgtgtttctgcccaggaacctcaggcgaatccgaaagtgccagaggggccag
gaggtgcagatgagagacgccaaagaaaccgccaagaaatcctccgaagctggtgaggac
tcaaagatcgagtgcatgtttaagctcaactcttacaagatggtttacgtcttcaagtcg
gaggactacatgtaccggcgtagcgcacaactgagagctcatcagtctcaccagcgagta
accactcgtcttcaccagcgctttcagctgtggctggacaggtggcagaaagatcacgtg
acgggtgacatggctgccgccactaacaattggctgatgggaaaggaccacgaaggcatg
ctgccctgcagaaccacccgtgagcccaagatcgtccactaccagaacattaacaaatat
aaagtctcctacagcactacgttgtaa
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