Triplophysa dalaica: 130419742
Help
Entry
130419742 CDS
T09616
Symbol
dhx15
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
tdw
Triplophysa dalaica
Pathway
tdw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130419742 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tdw03041
]
130419742 (dhx15)
03009 Ribosome biogenesis [BR:
tdw03009
]
130419742 (dhx15)
Enzymes [BR:
tdw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130419742 (dhx15)
Spliceosome [BR:
tdw03041
]
Complex A
U2 snRNP components
U2 related factors
130419742 (dhx15)
Complex B
130419742 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
130419742 (dhx15)
Ribosome biogenesis [BR:
tdw03009
]
Eukaryotic type
90S particles
Helicases
130419742 (dhx15)
BRITE hierarchy
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Atrophin-1
nSTAND3
AAA_25
SRP54
Flavi_DEAD
DUF3915
AAA_29
SR-25
Motif
Other DBs
NCBI-GeneID:
130419742
NCBI-ProteinID:
XP_056602660
EnsemblRapid:
ENSTDLG00000016124
LinkDB
All DBs
Position
1:4708827..4732383
Genome browser
AA seq
768 aa
AA seq
DB search
MSKRHRLDLGDDYSSSKKRSSDGKDRDRDRDERSKDRDRDRDRDRDRDRERDSKSSSVSL
SSSVSLSSSVSSGVGMIPLKQTAMQQQINPFTNLPHTPRFYEILKKRLQLPVWEYKERFN
DILNRHQSFVLVGETGSGKTTQIPQWCVDMVKVLPGPKRGVACTQPRRVAAMSVAQRVAD
EMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGMLLREAMNDPLLERYGVIILDEAHERTL
ATDILMGVLKEVVRQRSDLKVIVMSATLDAGKFQVYFDSCPLLTIPGRTHPVEIFYTPEP
ERDYLEASIRTVIQIHMCEEDEGDVLLFLTGQEEIDEACKRIKREIDDLGPDVGDIKIIP
LYSTLPPQQQQRIFEPPPPRKPSGAIGRKVVVSTNIAETSLTIDGVVFVIDPGFAKQKVY
NPRIRVESLLVTAISKASAQQRAGRAGRTRPGKCFRLYTEKAYKTEMQDNTYPEILRSNL
GSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALNDDGDLTELGSMMAEFPL
DPQLAKMVIASCEFNCSNEILSITAMLSVPQCFVRPTEAKKAADESKMRFAHIDGDHLTL
LNVYHAFKQNHESVQWCYDNFVNYRSLMSADNVRQQLSRIMDRFNLPRRSTEFTSRDYYI
NIRRALVTGFFMQVAHLERTGHYLTVKDNQVVQLHPSTVLDHKPEWVLYNEFVLTTKNYI
RTCTDIKPEWLVKIAPQYYEMGNFPQCEAKRQLERIVAKLQTKEYSQY
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacgacatcgcttggatttaggcgacgattattcgtcgagcaaaaagagatcg
tctgacggtaaggaccgtgacagagatcgtgacgagcgatcgaaggatcgtgaccgtgac
cgtgacagagaccgtgatcgggacagagagagagacagcaagagttccagcgtgtccctc
agctccagcgtgtccctgagctccagtgtgtccagcggtgtagggatgatccctctgaag
cagacggccatgcagcagcagatcaaccccttcaccaacctgcctcacaccccacgcttc
tacgagatcctcaagaagaggctgcagttgcccgtttgggaatataaagaacgctttaat
gatatcctcaaccgtcatcagagctttgtgctggttggagagacaggctctggaaaaact
acacagatccctcagtggtgtgtagacatggtgaaggtccttcccgggccaaagcgcggg
gtcgcttgtactcagccacgtagggtggcagccatgagtgtggcccaaagagtggcagat
gaaatggacgtcatgctgggacaggaagttggatactctatcagatttgaggactgtagc
tctgcaaagaccatactgaaatacatgacagatggtatgttacttcgtgaggctatgaac
gacccgttgctggagcgttacggcgtcattattctcgatgaggctcacgagcgcacgcta
gccacagacattctgatgggtgtactgaaagaggtggtgcgtcagaggtcagaccttaag
gtcatcgtcatgagcgccaccctggatgctggaaaattccaggtttatttcgacagctgc
cccttgctcactattcctggccggacgcatcccgtggagatcttctacacgcccgagccg
gagagggactacctggaggcgtcaattcgcacagtcatacagatccacatgtgtgaggaa
gacgagggggatgtactgctcttccttaccggacaggaggaaatcgatgaagcctgcaaa
cgaatcaaacgtgagattgacgacctgggccctgacgttggagacatcaaaatcatccca
ctgtactccaccctgccaccacaacaacagcagaggatctttgagccgcctccacctcgc
aaaccaagcggagccatcggcagaaaggtcgtggtttctacaaacatagctgagacgtcc
ctgaccatcgacggtgttgtgtttgtaattgatcctggctttgccaagcaaaaggtgtat
aacccgcgcattcgagtggagtcgcttctggtaacggctataagtaaggcttcagcccag
cagagagcaggccgtgccggacgtacgcgccctggcaagtgttttcggctgtacactgag
aaagcctacaagactgagatgcaggataacacgtaccctgagattctccggtccaatttg
ggctctgtggtgctacagctgaaaaagctggggattgatgatctggtgcactttgacttc
atggacccaccagctcccgagacgctgatgcgagccctggagctgttgaactatctggcg
gcgctaaatgacgacggggacctgacggagctgggttccatgatggcagagttccctctc
gacccccagctggccaagatggtcatcgccagctgcgagttcaactgctccaacgagatc
ctctccatcaccgcaatgttatcagtcccacagtgctttgtgcgcccaaccgaggctaag
aaggcagcggacgagtccaaaatgaggttcgcccacatcgatggggaccacctgaccttg
ctcaacgtctaccacgccttcaaacagaaccacgagtctgtgcagtggtgctacgataac
ttcgtcaactaccgctcgttgatgtctgccgataatgtgcggcagcagctctcgcgcatc
atggaccgcttcaacctgccgcgtcgcagcacggagttcaccagccgagattactacatc
aacatccgccgtgctctggtcaccggctttttcatgcaggttgctcacctggagcgcacg
ggacactatctaacggtgaaggacaaccaggtggtccagttgcacccttctactgtactg
gaccataagccagagtgggttctctacaacgagttcgtgctgaccacaaagaactacatc
cgcacctgcactgatatcaaacccgaatggctggtgaaaatcgctccacagtactatgaa
atgggcaactttcctcagtgtgaagctaagaggcagttggagcgcatcgtcgctaaactt
caaaccaaggaatactctcagtactaa
DBGET
integrated database retrieval system
