Triplophysa dalaica: 130419783
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Entry
130419783 CDS
T09616
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
tdw
Triplophysa dalaica
Pathway
tdw04510
Focal adhesion
tdw04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
130419783 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
130419783 (lamc3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
130419783
NCBI-ProteinID:
XP_056602729
LinkDB
All DBs
Position
4:21531953..21653512
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AA seq
1646 aa
AA seq
DB search
MMNSYELHIVLSFLLLLSITLSSVLAGMDSCYDEQGNMNRCLPKFENAGFNRSVIVSNVC
GIPPEDYCMQTGSTQSCHHCDAFDSELNHNATYLTDFHIDEEHTWWQSQSMFYGVQYPNS
VNITLHLGKAFEITYVRLKFYSSRPESFAIYKRTEENGPWQPYQYYSASCRKTYERDNKG
FIRPGDNERTALCTDEFSDISPLAGGNVAFSTIEGRPSAYNFDQSPVLQDWVTATDILIS
LDRLNTFGDEFLKDAKVLRSYFYAISDFSVGGRCKCNGHASECVTNEEGRLMCACEHHTA
GVDCERCAPFYQDRPWARATADSANQCVNCNCSGLADECVFDVEQYRSTGSGGRCVGCRG
NTAGPHCERCIENFYRSSPRQPCQNCSCNVMGSVSLQCDAEAKCLCWPGVSGVKCDICKS
GFHSLGPGGCRLCECDERGSGGVCSAEDGRCHCKTNVEGHSCNRCKLDSFNLQLENPEGC
KKCFCFGHSLACSSSNQHTAVQITSNFLEDPDGWRGVLTGGQEHSLIWKEGEVYLLPERE
ENGFYKAPDKFLGNMLLSYGRTLSVSFTAELEELLPRSVTVVLESSVISVAADLYPPQKP
RRSLDKTAINSFTLRLTERDVQPSISQYEFLQMLYNLTALHISNAGGQNYTSQLFMVTLE
SAVQVNDVAGHDPPAPWVEMCSCPTGFTGQFCELCASGFTRETPNGGPFSSCVPCNCNQH
GNCHPETGVCECTDFTTGLYCERCQDGYYGYSFNGSPGACSPCPCPDHTTCSQVPDTGDV
VCTNCPTGQRGVRCELCDDGFYGNPLGWGGEVRPCVRCECNGNVDPNAVGVCDHMTGRCL
KCVRHTTGDHCEKCRAGYYGNALDDEVRPEQKCKPCACNVAGTSVHLNDCHPDTGSCVCL
SHVTGRDCGQCEVGYFNLQPGLGCEMCNCHPIGSSSSACHPVTGQCICRTGVEGMSCDSC
RTGFFGFSSRGCRACNCDPMGSTSMQCYHNGTCSCRQGIVGYKCDKCERNYYQNRLTHQC
EECPVCYSLVRDQAIKLKAKLQELETLLASYDCNRYSRQHPWRQPHRHQHNRLDNHIQKD
QDEDFLPNALEDLIAIQEAREAFVRQFSQLETSAQTLQLQLRSITAALNCNLTDVVEESE
KNKTLNSEDGCRELVDALSAAVNMQEQLQKMTNDLNSMVIPSVIPKEPNKWNAAVNESKV
LVKSHTDMAAHIEQIAEDAFQVSNRAHSQLIALLEDNSTESHIQDLKVNLVEMQQLKENL
TREVNETRVKNLSLQKHNSEIVALLKNIKTSISELHRTDVNFTFTTEDTNITFVSQTLNE
TNFATTPDPKLIQTEALRNITAELDITVQSTEHLFNKTTEEIHPLVDSAEKHLKTVQELK
QLTSVAEGFKVSAISSVVTGKEIEEEILSLQNDLEDIEREWPRLPTLNKEFLKKEKVIKE
KILVDVKKKVKQGGRMIKTAAENATAANSTAKSTEESADALAKAAKASFTQGKRTKQASA
QLSSVLDVTLEQLTELEGQAGEKQEVMLVEEDLLSSKSVMSNMETARSQLQSFTEILSEL
LKNLDEKVALQNFDHTLNATAARLRVLKAAVESPALTGKIQELHGAAHSQEKQLQSLEEN
LQEIREERNSLADIAQNLPKCPQSGN
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcctacgaactccacatcgtgctttcgtttcttcttctgctttctatcacc
ttgtcctctgttcttgctggaatggactcttgttatgatgagcagggcaacatgaaccgc
tgcctgcctaaattcgagaacgcaggctttaatcgttccgtgattgtttccaacgtgtgt
ggcatcccgcccgaggattattgtatgcagacgggctccacgcaatcttgtcaccactgt
gacgccttcgactcggaactgaaccacaatgccacttacctgacggacttccacatagat
gaagagcacacctggtggcagagccagtctatgttctatggagttcagtatcctaattca
gtcaatatcactctgcatcttggcaaggccttcgagatcacatatgtccgtttaaaattc
tactccagccgaccggagagctttgcaatctacaagcgtacagaagagaatggaccatgg
caaccgtaccaatactacagcgcttcctgtcgcaagacttatgagagggacaacaaaggc
ttcatacgaccaggagataatgagaggacggccctctgcacagacgagtttagtgacatc
tctccactagctggtggaaatgtggccttctcaacaatagagggacgacccagtgcctac
aactttgaccagagtcctgtgttacaggattgggtgacagctacagatatcctcatctct
ctggacagactgaacacttttggagacgagttcctcaaagatgccaaagtgctgcgctca
tatttttatgccatatctgacttctctgtggggggcaggtgcaagtgtaacggtcacgcc
agtgagtgtgtaaccaatgaggagggacgtctgatgtgtgcttgtgagcaccacaccgct
ggggtcgactgtgagcgttgtgcaccattctaccaggaccgcccgtgggcacgggccact
gctgattcagccaaccagtgtgtgaattgtaactgcagcggtcttgccgatgaatgcgtc
tttgatgtggagcagtaccgcagcactggcagtggggggcgctgtgttggctgcagggga
aacacagctggccctcactgtgagagatgcatagagaacttttacagatcctcaccacga
cagccctgccagaactgcagctgtaatgttatgggttctgtgagtttgcagtgtgatgca
gaggcaaaatgtttgtgctggccaggtgtgtctggtgtgaaatgtgacatttgcaaatct
ggtttccattctctgggccctggtggatgcaggttgtgtgaatgtgatgaaaggggcagt
gggggagtgtgttcagctgaagatggacgctgccactgcaagactaatgtggaaggacat
tcttgcaacaggtgcaaactagactccttcaaccttcagctggagaatccagagggctgt
aagaaatgcttttgttttggccactcccttgcctgctcatcctccaatcagcacacggct
gtccagattacttcaaactttctagaagatccagatggctggaggggtgtattaaccgga
gggcaagaacactccctgatctggaaggagggagaagtttatctgttgcctgagagagag
gagaatggcttctataaagcccctgataaatttctggggaacatgttgctaagttacggg
cggacccttagcgtgtcatttacggctgagctggaagagcttctgcccagaagtgtgacc
gtggtgttggaaagctccgtaatatctgttgctgctgatttatatcctccacaaaagcct
cgtcgctcattggacaagacggccatcaactccttcactctcaggttgacagagagggat
gtccagccatctatatcccagtatgagtttctccaaatgctctacaatctgactgctcta
catatcagtaatgcagggggccaaaattacacctctcaactcttcatggtaacccttgaa
tctgcagtccaggtaaatgatgtggcaggacatgatccacctgctccatgggtggaaatg
tgttcatgtcccacaggattcacaggacagttctgtgagctctgtgcttctggattcacc
agggagacccctaatggtggacccttctcctcgtgtgtaccctgcaactgcaatcaacat
gggaactgccatcctgaaacaggtgtatgtgaatgcacagatttcaccactggcctttat
tgtgagcgttgtcaagatggttactatggctactcttttaatggcagcccgggcgcttgc
tcaccttgtccttgtccagatcataccacctgctcccaggtgccagacacaggggatgtg
gtttgtaccaactgcccaactggccagagaggtgttcggtgtgaactgtgtgatgacggt
ttttatgggaatcctctgggctggggcggtgaagttcggccgtgtgtgaggtgtgagtgt
aacgggaacgtggatcccaacgcggtgggtgtgtgtgatcatatgaccggacgctgtctg
aagtgtgtgagacatacaactggagaccattgtgaaaaatgcagagcgggttactatgga
aacgctttggatgatgaggtcagaccagagcaaaagtgcaaaccttgtgcctgtaatgtt
gctggtacctcagttcatttgaatgactgccacccagacacaggaagttgtgtttgcctg
agtcacgtgacaggaagggactgtggacaatgtgaggttgggtacttcaaccttcagcca
ggcttgggctgtgagatgtgtaactgccatcctattggctcctcctcttcagcgtgccat
ccagtcacaggccagtgtatttgtcggacaggtgtggaagggatgtcatgtgactcttgt
cgaactggcttctttggtttctcttctagaggctgcagagcctgtaattgtgaccccatg
ggctcgacctccatgcagtgctaccacaacgggacgtgttcttgtcgtcaggggattgtt
ggttataagtgtgacaagtgtgaaaggaactactaccagaaccgcctgacccaccaatgt
gaagagtgtccagtttgctatagtctagtcagagatcaggccattaaactcaaagccaaa
ctgcaagagctggagacacttctcgccagctatgactgcaacagatacagtcgccagcat
ccctggcgccagccacatagacaccaacataaccgcctggacaatcacatacagaaagat
caggatgaagacttcctcccgaatgccctggaggaccttattgcaattcaagaggctcgc
gaggcctttgttaggcagttctcacagctggaaacatctgcgcagactttacagctacag
ctgcgcagcatcactgcggcattgaactgcaacctcacagatgttgttgaagaatccgag
aaaaacaagactttgaacagtgaagatggatgtcgggagcttgttgacgcgttatcggct
gctgtgaatatgcaggagcagcttcagaagatgactaatgaccttaacagcatggtcatt
ccttctgtcatcccaaaagagccaaacaaatggaacgccgctgtgaatgaatctaaagta
ctagttaaaagtcatacagacatggctgcacatatagaacagattgcagaagatgctttc
caagtgtctaacagagcccattctcaactcatcgctctgctagaagacaactcaacagag
tcccacatacaagatcttaaagtcaatctggtggagatgcaacagttgaaggagaatctg
actcgagaggttaatgagactcgagtgaaaaacctgtcacttcagaagcacaactctgag
attgtcgctcttttaaagaacatcaagacttccatatcagagctgcacagaaccgatgtc
aatttcacctttacgacagaggacaccaatataacattcgtctcacaaacacttaatgaa
acaaattttgcaacaaccccggatccaaaactcatccagaccgaggccctgaggaacata
acagcagagttggacattacggttcagtccacagagcatctgtttaacaagactacagag
gaaattcatcctcttgtggatagtgctgaaaaacacctgaaaactgttcaagagctcaag
cagctgacaagtgtggctgaaggatttaaggtgtcagccatctcctctgtggtgacaggg
aaagagattgaggaggagatcctgtctctgcaaaatgatctagaagacattgagcgggaa
tggcctcgattgcccaccctcaacaaagagtttctaaagaaagagaaggtgattaaggag
aagatcctggtggacgtgaagaaaaaagtcaagcaaggaggaagaatgatcaaaactgct
gcggagaacgccacggccgctaacagcacagctaaaagtactgaagagtctgcagatgca
ttggctaaagctgccaaagcgtccttcacacagggaaagcggacaaaacaagcatctgca
cagttgagctcagtgcttgatgtcacattggagcagctgaccgagctggaaggccaagct
ggagagaagcaggaagtcatgctggttgaggaggatttgctttcctcaaagagtgtcatg
agcaatatggagacggcaagaagtcagctgcagtcatttacagaaattttatccgagctc
cttaaaaacctggatgagaaagttgcactacagaactttgaccacaccttaaacgccaca
gcagcccgtcttcgtgttctcaaagctgctgtggagagcccggcactcacaggaaagatc
caggaacttcacggtgctgcacacagtcaagagaaacagctgcaaagtcttgaagaaaac
ctgcaggagattcgagaagaaagaaacagtctggccgacatcgcccagaacttgcccaaa
tgccctcaaagtgggaattga
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