Triplophysa dalaica: 130419816
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Entry
130419816 CDS
T09616
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
tdw
Triplophysa dalaica
Pathway
tdw04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
130419816 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tdw04040
]
130419816 (chrne)
Ion channels [BR:
tdw04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
130419816 (chrne)
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
130419816
NCBI-ProteinID:
XP_056602770
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Position
4:complement(23578525..23585342)
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AA seq
518 aa
AA seq
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MAAQFGRTCIVAFALVACTLLQVNGNEESKLLADKFKNYNKNIRPARNPEEKVKVQVKLT
LTNLISLNEKEETLTTNVWIEIQWSDYRLAWNTSEYHGIDLIRVPYNTVWLPDIVLENNI
DGKFDVAYYANVLISNDGSMYWLPPAIYRSTCAIEITYFPFDWQNCTLVFRSQTYSANEI
FIMLAEDGETGKPIEWVDIDPEAFTENGEWAIKHRPARKLTNPRYSPDDLEYQEVYYNLI
IQRKPLFYIINIILPCSLISSLVVLAYFLPAQAGGQKLTVSISVLLAQTVFLFLIAQKIP
ETSLSVPLIGKYLIFVMCMTTLIVTNCIIVLNFSLRSPSTHTMSNTFRHIFLEVVPRFLG
MASVLEEEGPGGGAHEMRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLMRTIVD
EIDISNTANLYKSLAKTAPEIKECVDACNFIAESTKQQNDIGSEMESWVLIGKVIDKVCF
WVAMLLFSIGTVAIFLMGHFNQAPEYPFPWENKKYVPE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcaatttggcaggacgtgtatagtggcatttgcgcttgtcgcctgcacttta
ttacaagtcaatggaaatgaggagtcgaagctacttgcagataagtttaaaaactacaat
aaaaatattcgaccagcaagaaacccagaagaaaaagtgaaggttcaagtcaagctcacc
ctgaccaatcttatttctttgaatgagaaagaggaaactcttactacaaatgtctggatt
gagattcaatggtcagattatcgacttgcttggaatacatcggagtatcatggtattgac
ctgatccgtgtgccatacaacactgtctggctgccagatatagtattagaaaataacatt
gacggcaagtttgatgtggcatactatgctaatgtgctgatttcgaatgatggctctatg
tactggcttccccctgccatctaccgcagtacctgtgctattgagatcacctacttccct
tttgactggcaaaactgcaccttagtattcaggtctcagacatacagtgccaatgaaatt
tttataatgttggcagaagatggagaaacagggaagcctattgagtgggtggacattgac
cctgaggccttcacagagaatggggagtgggcaatcaagcatcgccctgcccgtaaactg
acaaacccacgctattctccagatgatctagagtaccaggaagtgtattataatctcatc
attcagaggaaaccactcttctacatcatcaacatcattttgccctgctctcttatctcc
tctcttgtggttctggcctactttctccctgctcaagccggagggcagaagctgaccgtg
tccatttcggtgctgttggctcagactgtgtttctcttcctgattgctcagaaaattcca
gaaacttcactttctgtgcctctcattggcaaatatttgattttcgtcatgtgtatgacc
acactgattgtaaccaactgcatcatcgtcctcaacttctccctccgcagtcccagtaca
cacacgatgtcaaacactttcagacatatttttctcgaggtggtccctcgttttctcggc
atggcctcggttctggaagaggaggggccaggaggtggggcgcatgaaatgagagagagg
agacgcagttcgtttggactgatgcagagggccgaagaatatgtactgaaacagccacgc
agtgagatgatgtttgacaaacagagagagagacacggactcatgcgcacaatcgtggat
gaaattgatataagcaatacggcgaacctctacaagagtctggcgaaaacagctccagag
ataaaagaatgtgtagatgcctgcaacttcattgctgaatccacaaagcagcagaatgac
attggatctgagatggagagttgggtgttgattggtaaggtgatcgataaagtttgtttc
tgggtagccatgctgcttttctccattggcacagtggccattttcctcatgggtcacttc
aaccaggcacctgagtacccatttccttgggagaacaagaagtatgtccctgagtga
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