Triplophysa dalaica: 130419934
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Entry
130419934 CDS
T09616
Symbol
nup214
Name
(RefSeq) nuclear pore complex protein Nup214 isoform X1
KO
K14317
nuclear pore complex protein Nup214
Organism
tdw
Triplophysa dalaica
Pathway
tdw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tdw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130419934 (nup214)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tdw03019
]
130419934 (nup214)
Messenger RNA biogenesis [BR:
tdw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130419934 (nup214)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_NUP159_NUP214
Beta-prop_EML_2
WD40
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
WD40_WDHD1_1st
Beta-prop_RIG_2nd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Motif
Other DBs
NCBI-GeneID:
130419934
NCBI-ProteinID:
XP_056602926
LinkDB
All DBs
Position
4:1456892..1475028
Genome browser
AA seq
1948 aa
AA seq
DB search
MMTEDTDSVPDREMKDFQFRQLKKIRLFAPPGDLPKERSNLLAISNKYGLTFAGQDGTLK
VFLTRDVMAVGHVEANPNEIVENVSAVTVSVHMSMHHLALSSDELTLSVCGTQDAAKLTV
YFYDVRTFYNKSQQEKRPFASFSPADGSKVVLQDLKWSPVEAFRLALCLSDGSMMVLDVQ
DSVNVLARLPASTGVTCVCWSPKGKQVAVGKQDATVVQFTPTLQPKKVIPCPRFYSQENP
VKVLDVLWLSTYSFGVVYAAADGSLETPPDLVMVSLPSKTDQRAELYMNFNDLVFGICTV
RQHHFYLCHIEDWDLVLAASAASAEVSVIAKQQDKVNWELWILEDASRAELPVTDDNEDT
LPVGVAIDYTSQEEIQLSDENRVRPVPTLMILSTDGVLCPFSFLNLNPGVKPLTKATSPL
PVDCERAPSTKSLSAPAVFAAISSFPASAISAPSPASLTFAPPPPAYTSSAPPPPITTAP
PPASSSTGFSFSLPAQGSVAPSHFSLNSTSSIFSAPKPSSEAPSGFSFGSASLKEVSSST
PQRTASPIISTPNIPAEPATPAVRMNLADRYLTVDTPASSIQQFPLTSTPKPPASDPISQ
PPSVLNFSRAPPAMSRPAQSFAPPLAVQKTALVAPPASSSAPSAQGVPVKTPEKRLQQKK
VVDPVMIGIHEEIEHFQKELDELRTSCRNFNFIVGSTDEMRELRKESENLHIFAGEIKDT
TESVHGDIRMLKTSLLEGFAGAEEAISQSALNRDKDYLQLLYKKPLDPRREEQLKEIRRM
YQYVKFAMEDVNDVLDLEWEKHLEKRKKQRHMVVPERESLFTALANHLDIINQQKHRLEK
LLNDLHKLRLYKGTSARSFPSRTPSTPSQESLDSELESLKDALLKASLDASPRAPVKSPS
KMTPAKQTQLRNFLSKRQTPPVRSTAPANLSRSAFLFPQYSEDEVSSTSSLSQPLESEDI
LAMAEEEEEPGPIPIVMPSVLRHSAVVRTPSIQPGFSMQSDPFSRVATGLVPILSSAHKI
IMDSADSTSLATKTVKHGAPPTERTTPTTIPATQAAAIAALNRHITSQKPGAPLTESTLK
VVPQVVNVQELRDEGPPAPVSTVISSSVPAPAAQVVQQVLATVEASKNSFQGGLKVSAPL
AGAAQSTPVGFLFAAAVDAGVTSSSNSKVPSGFSFTAGPGFNFTSTSQSQDNTQAKSSAL
PGKFSFASSTAAKKAFASSGSEESFSFAPKLMSPAQNVSSSTPPPALAETAKLPPAPKAQ
GGAGETLGCFSGLRVGQTDEASKAMSFAFGSSSNGSTGFTFGPPQIKPVESGASSDSVVP
KAEGPKTTTPQAFGLSSTFTFKPQEGTLLSTTPAFTIPSTTSFPPAATSFNSLLQAPLPE
SVTKSPQTEASSSTELAVSEVQEPQTEPSHEPTTPPTQSTPEGPASSQPASVDTTVPSTD
TPSVPSALTPEVTPPPATVTQPAEVTPVTKPPAEPVSAPASEVTTVPEPTPASQEAPAAS
VATPSVPPSDKPGSIFAPPLGGTDGPMLGAVNLTPVVSTAAPSTQSNPPVTSTASTAPIA
AFGQPPGAAFGSPGFGTSAASGFSKPAFGQSTGAGFGQPAAPGSSSGFTFGQPAFGGAVS
GFGQPAAPAAVTTTSSDGGGLFGASTGSGASSFSFAAPTSSASSTGAGHFGQSSAPVFGQ
PSSGFGQGSLFGNNTTTSSSTGFGFGQQSVFGSSTSSLSVFGQQTSGTSVFGQAQSGGGL
FSSSAGNASSGSGFFSGLGGKPSEDAANKNPFGSTGTGGFGQNVAAAGSSSLFGNSAAKG
LSSFGEQKTSGSFSTGAGTVAAQGFGSFSTPTKPGGFSNPPSFGSPPSFGGSPAFGAQSN
FGPAPSFSSPLGGSSSTGKVFGEGTAAANVGGFGFASPSNAPTFGSIANQNTAPPPSFGS
IANQNTAPSASFGSISNQNTAPPPSFGA
NT seq
5847 nt
NT seq
+upstream
nt +downstream
nt
atgatgacggaagacacggactcagttcctgacagggaaatgaaggattttcagtttcgt
cagctgaagaaaatccgtctgtttgctccacctggtgatttacccaaagaacgctcaaat
cttcttgcgatctcaaataaatatggtctgacgttcgctggccaagacggaacgctcaaa
gtgttcttgacgagagacgtcatggccgtcgggcatgtggaggcaaaccctaatgagata
gtggagaacgtgagcgctgtcacagtgagcgtccacatgtccatgcatcatctggctttg
agcagcgatgagctcacgctgtctgtgtgcggcacgcaagacgccgccaagctcacagta
tacttctacgacgtccgcaccttctacaacaagtcccaacaggaaaaacgtccttttgcg
tccttcagtccagcagatggatcaaaggttgttctccaggacctgaagtggagtccggtg
gaggcgttccgtctggccctgtgtctgtctgacggcagtatgatggtgctggacgtccag
gactccgttaatgtgctcgctcggctgcctgcgtctacaggggtcacctgcgtttgctgg
agtcctaaaggaaagcaggtggctgttgggaaacaggacgctacagtagttcagttcaca
cctaccttacagcccaagaaagtgatcccatgtcccagattctacagtcaggaaaatcct
gtcaaagtcctggacgtgttgtggctgagcacatacagcttcggtgtggtctacgcagca
gcagacggctctctagagactccgcctgacctggtgatggtgtcacttcctagcaaaacc
gaccagagggccgagctctatatgaactttaatgacctggtgtttggaatctgcactgtg
agacaacaccatttttatctgtgccacatcgaggactgggatctcgtgttggctgcatca
gccgcttctgctgaggtcagcgtcatcgccaaacaacaagacaaggtgaactgggagctg
tggatactggaggacgcaagcagagccgagctgcccgtaacagatgacaatgaagacaca
cttcctgtgggcgtggctatagattacactagtcaggaggagatacagctctctgatgag
aatagagttcgtccagtcccgacattgatgatactatctacagacggagttctgtgtcca
ttctctttcctcaacctcaaccccggggtcaaacctctgaccaaggccaccagcccactg
cctgttgattgcgagagagctccttccaccaagtctctctctgcacctgctgtgtttgcc
gccatctcgtctttcccagcatccgccatctcagccccgtccccagcctccttaaccttc
gctcccccgcctccagcctatacatcttccgcacctccgcccccaatcactacagccccg
ccccctgcatcgtcctccacaggtttctcattctctcttcctgctcaaggctctgtcgcc
ccctcccacttctccctcaactccacctcgtccatcttctccgctcccaagccctcctca
gaggctccctcaggcttctctttcggctccgcctctctgaaggaggtcagcagctccact
ccacagcggacggcatctcccatcatcagcacccctaatatcccagcggagcccgccaca
ccagcggtcagaatgaacctcgctgacaggtatttgacagtagatacaccagcatcatcc
atccagcagtttcctctgacgtccacccctaaaccaccagcatcagatcccatcagtcag
ccgccctcagtgctgaacttcagcagagctcctccagccatgtcacgccccgctcaaagc
tttgcacctcctctcgctgtgcagaaaactgctctggttgcccctcctgcgtccagctct
gcaccgtctgcgcagggcgttcctgtgaaaacccctgagaaacgtctacagcagaagaaa
gttgtggaccccgtcatgatcggaatccacgaggagatcgaacactttcaaaaggagctg
gacgagctgaggactagctgtaggaacttcaacttcatagtgggcagcacagacgagatg
agagagctccggaaagaatcagagaacttgcacatcttcgctggggaaatcaaagacacc
accgagtctgtgcatggagacatcagaatgctgaagaccagcctgctggaggggtttgct
ggtgcagaagaagccatatcccagagcgcactcaaccgggataaagactacctgcagctg
ctttacaagaaaccgctggaccctcgacgagaagaacagctcaaggagatccgccgcatg
tatcagtatgtgaagtttgccatggaggacgtgaacgatgttctggacctggagtgggag
aaacacttggagaagagaaagaagcagaggcacatggtggtcccagaaagagaatctctg
tttactgctctggccaatcatcttgacatcatcaaccagcagaaacatcgcctggagaag
ctgctcaatgacctgcacaaactgagactctacaaaggcacgtcagcgaggagtttcccc
agccggaccccctcaacaccttcacaagagagtttggacagtgagctggagagtttgaaa
gacgctcttctgaaagccagtctggatgcgtcacccagagctcctgtcaaatcgccatct
aaaatgactccagccaagcagacgcagctgaggaactttctgtctaagaggcagacgccg
ccggtgcgatcaacagctcctgcgaatctgtctcgctcagcgttcctgttccctcagtat
tctgaggatgaggtgagctccacctcctctctctctcagcctctcgagtcggaggacata
ttggctatggcagaagaagaggaggaacctggacccatccccatcgtgatgccctctgtc
ctgcggcactcagcggtggtccgcacgccctccatacagcccggcttcagtatgcagtct
gatccgttcagtagagtcgcgaccggcctcgttcccatccttagtagtgcacataagata
atcatggacagcgcagacagcacatcattagctaccaaaacagtgaagcacggagccccg
cccaccgagaggaccacacccaccactatccccgccactcaggccgcagcaatagctgct
cttaacagacacataaccagccagaaaccaggagctcctctgaccgagtccactctcaag
gtcgttcctcaggtggtcaacgtacaggagctgagagatgaaggaccaccggcgcctgtg
tccactgtcatcagctcgtcggttcccgctccagcagctcaggtggtccagcaggttttg
gctacagtggaggccagtaaaaattcctttcaaggaggattaaaggtctctgctcctctg
gcaggagcggctcaaagcacaccagtgggttttttgttcgctgcagcagtagacgcaggt
gtaacttcatcatcaaactcaaaggttccttcaggcttctctttcacagcaggacctggg
ttcaatttcacaagtacctctcagtcacaggacaacactcaagctaagagttctgctctt
ccaggcaagttctcttttgccagcagtacggcagctaagaaggcatttgcctcatcggga
tctgaagagtccttttccttcgctcccaaactcatgtctcctgcacagaacgtgagctcc
tccactcctcctcctgctttagccgagaccgcaaaactcccaccggctcccaaagctcag
ggtggagccggagagaccctcggctgtttctctggtttacgagtaggccaaactgacgag
gcctccaaagccatgagtttcgcttttggatcatccagtaacggatctacaggattcacg
tttggccctcctcagatcaagcccgtggaaagtggcgcttcatccgattcagtagttcct
aaagccgagggtcccaagacgactacaccacaagcatttggactgtcatctacgttcacc
tttaaaccacaggagggaacgcttctgtcgacaacgccagctttcacaattccatcaaca
acatcttttcccccagccgccacctcgttcaacagtctcttgcaggcacctcttcccgag
tctgtgacaaagtccccgcaaaccgaggcgtcttcatcaactgagctagctgtctctgaa
gtacaggaaccgcaaacagaacccagtcatgaacccacaaccccacccacccaatctact
cctgaaggacctgcttcctcccaacccgctagtgtcgataccactgttccgtctacagac
acgccctcagtgccttccgccctcaccccagaggtcacaccacccccagctacagttacc
caaccagccgaggtgacacccgtcaccaaaccccccgcagaacccgtctctgctcctgcc
tctgaggtcactaccgttcccgaacccacccctgcgtcccaagaggccccagcagcatca
gtcgccacaccttcagttccaccatcagacaagccaggatctatttttgccccaccgttg
ggcggcacagacggtccaatgttaggagccgtcaatctcaccccagtcgtgagtacggca
gcaccatccacccagtcaaacccgccggtgaccagcacagcgagcacagctcccatcgca
gcgttcggtcagcctccgggtgctgcatttggatctccaggttttggcacttctgccgcc
tctggcttcagcaaaccggcgtttggacagagtaccggtgctggttttggccagcctgca
gccccaggctctagtagcggctttacgtttgggcagccggcgtttggcggtgctgtgtct
ggatttggtcagccggcggcacctgcagctgttaccacaacctccagcgatggaggagga
ctatttggagcctcgacaggcagcggtgccagttcattctcgttcgccgcccccaccagt
tcagccagcagtacaggtgcaggacatttcggtcagagcagcgcgccggtcttcggacag
cccagctcaggctttgggcagggctctttatttggcaataacacaactacatcgtcctct
actggattcggctttggacaacagtcagtgtttggcagcagtacgtcctctttatctgtg
tttggtcagcagaccagcggcactagcgtctttggtcaggctcagtccggcggaggtctg
ttcagttcttctgcaggaaacgcgtcatctggatccgggttcttcagcggtcttggaggc
aaacccagcgaagacgccgccaacaagaacccgtttgggtcaacgggcacaggaggcttc
ggtcagaacgtcgctgcagcaggttccagcagtctgtttgggaacagtgcagctaaaggc
ttaagttcgttcggcgagcagaagaccagcggttcattcagtaccggagcgggaactgtg
gcggcgcagggcttcgggtcattctcaacacccaccaaaccaggaggtttcagcaacccc
ccctcgttcggcagtcctccttccttcggtggctctccagcgttcggagctcagtccaat
tttgggcccgccccttccttcagcagtccgctgggtggctcctcctccacagggaaggtg
ttcggagagggcactgcggccgccaatgtgggcggattcgggtttgcctcaccttccaac
gcacccacgttcggcagtatagccaatcagaatacagcgcctccaccatcgtttgggagc
atagccaaccagaatacagcaccatcggcttcattcgggagcatatccaatcagaataca
gcaccgccaccatcgtttggagcatag
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